RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 APOL5Q9BWW9 433 aa21.61■■□□□ 1.05
CMTM3-211ENST00000565922 PLEKHA4Q9H4M7 779 aa21.61■■□□□ 1.05
CMTM3-211ENST00000565922 MAN1C1Q9NR34 630 aa21.61■■□□□ 1.05
CMTM3-211ENST00000565922 CPSF3Q9UKF6 684 aaKnown RBP21.61■■□□□ 1.05
CMTM3-211ENST00000565922 AGO2Q9UKV8 859 aaKnown RBP21.61■■□□□ 1.05
CMTM3-211ENST00000565922 KCNH3Q9ULD8 1083 aa21.61■■□□□ 1.05
CMTM3-211ENST00000565922 ANKRD63C9JTQ0 380 aa21.6■■□□□ 1.05
CMTM3-211ENST00000565922 FGFR3P22607 806 aa21.6■■□□□ 1.05
CMTM3-211ENST00000565922 ENOX2Q16206 610 aaKnown RBP21.6■■□□□ 1.05
CMTM3-211ENST00000565922 ATAT1Q5SQI0 421 aa21.6■■□□□ 1.05
CMTM3-211ENST00000565922 C15orf39Q6ZRI6 1047 aa21.6■■□□□ 1.05
CMTM3-211ENST00000565922 C18orf25Q96B23 403 aaPredicted RBP21.6■■□□□ 1.05
CMTM3-211ENST00000565922 C7orf25Q9BPX7 421 aa21.6■■□□□ 1.05
CMTM3-211ENST00000565922 CD320Q9NPF0 282 aa21.6■■□□□ 1.05
CMTM3-211ENST00000565922 USP25Q9UHP3 1055 aa21.6■■□□□ 1.05
CMTM3-211ENST00000565922 NR2E1Q9Y466 385 aa21.6■■□□□ 1.05
CMTM3-211ENST00000565922 BDP1A6H8Y1 2624 aa21.59■■□□□ 1.05
CMTM3-211ENST00000565922 SYN3O14994 580 aa21.59■■□□□ 1.05
CMTM3-211ENST00000565922 MEFVO15553 781 aaPredicted RBP21.59■■□□□ 1.05
CMTM3-211ENST00000565922 LDHAP00338 332 aaKnown RBP21.59■■□□□ 1.05
CMTM3-211ENST00000565922 ADRB2P07550 413 aa21.59■■□□□ 1.05
CMTM3-211ENST00000565922 MYBP10242 640 aa21.59■■□□□ 1.05
CMTM3-211ENST00000565922 CMA1P23946 247 aa21.59■■□□□ 1.05
CMTM3-211ENST00000565922 NUCB2P80303 420 aa21.59■■□□□ 1.05
CMTM3-211ENST00000565922 PRSS55Q6UWB4 352 aaPredicted RBP21.59■■□□□ 1.05
CMTM3-211ENST00000565922 CYP26C1Q6V0L0 522 aa21.59■■□□□ 1.05
CMTM3-211ENST00000565922 ANKS3Q6ZW76 656 aa21.59■■□□□ 1.05
CMTM3-211ENST00000565922 C3orf58Q8NDZ4 430 aa21.59■■□□□ 1.05
CMTM3-211ENST00000565922 LNX1Q8TBB1 728 aaPredicted RBP21.59■■□□□ 1.05
CMTM3-211ENST00000565922 C1QTNF1Q9BXJ1 281 aa21.59■■□□□ 1.05
CMTM3-211ENST00000565922 ASB7Q9H672 318 aa21.59■■□□□ 1.05
CMTM3-211ENST00000565922 DERAQ9Y315 318 aa21.59■■□□□ 1.05
CMTM3-211ENST00000565922 C5orf42Q9H799 3197 aa21.59■■□□□ 1.05
CMTM3-211ENST00000565922 LACTBL1A8MY62 500 aa21.58■■□□□ 1.05
CMTM3-211ENST00000565922 ALADP13716 330 aa21.58■■□□□ 1.05
CMTM3-211ENST00000565922 GARTP22102 1010 aa21.58■■□□□ 1.05
CMTM3-211ENST00000565922 LRPAP1P30533 357 aa21.58■■□□□ 1.05
CMTM3-211ENST00000565922 UNC13DQ70J99 1090 aa21.58■■□□□ 1.05
CMTM3-211ENST00000565922 BEST2Q8NFU1 509 aa21.58■■□□□ 1.05
CMTM3-211ENST00000565922 CMASQ8NFW8 434 aaPredicted RBP21.58■■□□□ 1.05
CMTM3-211ENST00000565922 FAM212AQ96EL1 285 aa21.58■■□□□ 1.05
CMTM3-211ENST00000565922 TUBGCP4Q9UGJ1 667 aa21.58■■□□□ 1.05
CMTM3-211ENST00000565922 LOC730098B7Z3J9 87 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 KIAA0391O15091 583 aaKnown RBP21.57■■□□□ 1.04
CMTM3-211ENST00000565922 EIF3DO15371 548 aaKnown RBP eCLIP21.57■■□□□ 1.04
CMTM3-211ENST00000565922 TGM5O43548 720 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 SLFN14P0C7P3 912 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 RPL17P18621 184 aaKnown RBP21.57■■□□□ 1.04
CMTM3-211ENST00000565922 PAX3P23760 479 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 MCM4P33991 863 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 BRCC3P46736 316 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 ACOT2P49753 483 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 CASP5P51878 434 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 ZBTB6Q15916 424 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 FAM26FQ5R3K3 315 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 ZBTB41Q5SVQ8 909 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 CD300LGQ6UXG3 332 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 TMC5Q6UXY8 1006 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 GPR149Q86SP6 731 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 PALB2Q86YC2 1186 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 GLYCTKQ8IVS8 523 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 C12orf76Q8N812 135 aaPredicted RBP21.57■■□□□ 1.04
CMTM3-211ENST00000565922 RPGRIP1Q96KN7 1286 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 RHOBTB2Q9BYZ6 727 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 MTRRQ9UBK8 725 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 C2CD2Q9Y426 696 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 BACE2Q9Y5Z0 518 aa21.57■■□□□ 1.04
CMTM3-211ENST00000565922 UBE4BO95155 1302 aa21.56■■□□□ 1.04
CMTM3-211ENST00000565922 PVALEFA0A1B0GWK0 134 aa21.56■■□□□ 1.04
CMTM3-211ENST00000565922 TISP43B9A030 160 aa21.56■■□□□ 1.04
CMTM3-211ENST00000565922 H7C4K7 107 aa21.56■■□□□ 1.04
CMTM3-211ENST00000565922 IL18RAPO95256 599 aa21.56■■□□□ 1.04
CMTM3-211ENST00000565922 TKTP29401 623 aaKnown RBP21.56■■□□□ 1.04
CMTM3-211ENST00000565922 SPAG1Q07617 926 aa21.56■■□□□ 1.04
CMTM3-211ENST00000565922 KCNA1Q09470 495 aa21.56■■□□□ 1.04
CMTM3-211ENST00000565922 TMEM132DQ14C87 1099 aa21.56■■□□□ 1.04
CMTM3-211ENST00000565922 LIN9Q5TKA1 542 aa21.56■■□□□ 1.04
CMTM3-211ENST00000565922 NT5DC4Q86YG4 428 aa21.56■■□□□ 1.04
CMTM3-211ENST00000565922 APPL2Q8NEU8 664 aa21.56■■□□□ 1.04
CMTM3-211ENST00000565922 SUSD3Q96L08 255 aa21.56■■□□□ 1.04
CMTM3-211ENST00000565922 CLSTN3Q9BQT9 956 aa21.56■■□□□ 1.04
CMTM3-211ENST00000565922 POMKQ9H5K3 350 aa21.56■■□□□ 1.04
CMTM3-211ENST00000565922 ZDHHC7Q9NXF8 308 aa21.56■■□□□ 1.04
CMTM3-211ENST00000565922 PI4K2BG5E9Z4 385 aa21.55■■□□□ 1.04
CMTM3-211ENST00000565922 PRPF6O94906 941 aaKnown RBP21.55■■□□□ 1.04
CMTM3-211ENST00000565922 MYL1P05976 194 aa21.55■■□□□ 1.04
CMTM3-211ENST00000565922 PFKFB1P16118 471 aa21.55■■□□□ 1.04
CMTM3-211ENST00000565922 ADSSP30520 456 aa21.55■■□□□ 1.04
CMTM3-211ENST00000565922 AFMP43652 599 aa21.55■■□□□ 1.04
CMTM3-211ENST00000565922 SPATA1Q5VX52 437 aa21.55■■□□□ 1.04
CMTM3-211ENST00000565922 JADE1Q6IE81 842 aa21.55■■□□□ 1.04
CMTM3-211ENST00000565922 ARMCX5Q6P1M9 558 aa21.55■■□□□ 1.04
CMTM3-211ENST00000565922 LILRA6Q6PI73 481 aa21.55■■□□□ 1.04
CMTM3-211ENST00000565922 KREMEN2Q8NCW0 462 aa21.55■■□□□ 1.04
CMTM3-211ENST00000565922 A0A1B0GVL5 298 aa21.54■■□□□ 1.04
CMTM3-211ENST00000565922 A0A1W2PQ27 194 aa21.54■■□□□ 1.04
CMTM3-211ENST00000565922 A0A1W2PQ64 194 aa21.54■■□□□ 1.04
CMTM3-211ENST00000565922 A0A1W2PQD8 194 aa21.54■■□□□ 1.04
CMTM3-211ENST00000565922 ARHGEF37A1IGU5 675 aa21.54■■□□□ 1.04
CMTM3-211ENST00000565922 I3L4J1 428 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms