RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 PPP1R12CQ9BZL4 782 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 A0A0U1RQF3 1178 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 ARHGAP6O43182 974 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 PARNO95453 639 aaKnown RBP20.19■□□□□ 0.82
COMMD4-213ENST00000565834 MFAP3P55082 362 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 DRAP1Q14919 205 aaPredicted RBP20.19■□□□□ 0.82
COMMD4-213ENST00000565834 ARHGAP44Q17R89 818 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 XKR4Q5GH76 650 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 E4F1Q66K89 784 aaPredicted RBP20.19■□□□□ 0.82
COMMD4-213ENST00000565834 WDR59Q6PJI9 974 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 MRPL10Q7Z7H8 261 aaKnown RBP20.19■□□□□ 0.82
COMMD4-213ENST00000565834 ZSCAN30Q86W11 494 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 TMTC1Q8IUR5 882 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 FAM81BQ96LP2 452 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 ZMAT2Q96NC0 199 aaKnown RBP20.19■□□□□ 0.82
COMMD4-213ENST00000565834 FTHL17Q9BXU8 183 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 CXCL16Q9H2A7 254 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 TBX21Q9UL17 535 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 PYCARDQ9ULZ3 195 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 F8VZ95 297 aa20.18■□□□□ 0.82
COMMD4-213ENST00000565834 CST3P01034 146 aaPredicted RBP20.18■□□□□ 0.82
COMMD4-213ENST00000565834 KRT19P08727 400 aa20.18■□□□□ 0.82
COMMD4-213ENST00000565834 CLTBP09497 229 aa20.18■□□□□ 0.82
COMMD4-213ENST00000565834 KCNE1P15382 129 aa20.18■□□□□ 0.82
COMMD4-213ENST00000565834 MYL6P60660 151 aa20.18■□□□□ 0.82
COMMD4-213ENST00000565834 NOP14P78316 857 aaKnown RBP20.18■□□□□ 0.82
COMMD4-213ENST00000565834 SGSM1Q2NKQ1 1148 aa20.18■□□□□ 0.82
COMMD4-213ENST00000565834 GLRA4Q5JXX5 417 aa20.18■□□□□ 0.82
COMMD4-213ENST00000565834 HELQQ8TDG4 1101 aa20.18■□□□□ 0.82
COMMD4-213ENST00000565834 TATDN2Q93075 761 aa20.18■□□□□ 0.82
COMMD4-213ENST00000565834 RGS18Q9NS28 235 aa20.18■□□□□ 0.82
COMMD4-213ENST00000565834 TMEM39AQ9NV64 488 aa20.18■□□□□ 0.82
COMMD4-213ENST00000565834 DPP3Q9NY33 737 aa20.18■□□□□ 0.82
COMMD4-213ENST00000565834 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.18■□□□□ 0.82
COMMD4-213ENST00000565834 SIX4Q9UIU6 781 aa20.18■□□□□ 0.82
COMMD4-213ENST00000565834 ITGA11Q9UKX5 1188 aa20.18■□□□□ 0.82
COMMD4-213ENST00000565834 R3HCC1Q9Y3T6 440 aaKnown RBP20.18■□□□□ 0.82
COMMD4-213ENST00000565834 TET1Q8NFU7 2136 aa20.18■□□□□ 0.82
COMMD4-213ENST00000565834 SMIM28A0A1B0GU29 152 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 XPOTO43592 962 aaKnown RBP20.17■□□□□ 0.82
COMMD4-213ENST00000565834 ASS1P00966 412 aaKnown RBP20.17■□□□□ 0.82
COMMD4-213ENST00000565834 ITGB3P05106 788 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 STAT1P42224 750 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 CDK17Q00537 523 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 GCNT1Q02742 428 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 GPNMBQ14956 572 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 ASIC2Q16515 512 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 PLEKHG4Q58EX7 1191 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 SPOPLQ6IQ16 392 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 ENOSF1Q7L5Y1 443 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 FMNL3Q8IVF7 1028 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 BEST2Q8NFU1 509 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 SEPT8Q92599 483 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 LPPQ93052 612 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 ELMO3Q96BJ8 720 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 PGBD4Q96DM1 585 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 SCLYQ96I15 445 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 WNT8AQ9H1J5 351 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 AIPL1Q9NZN9 384 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 UBQLN1Q9UMX0 589 aaKnown RBP20.17■□□□□ 0.82
COMMD4-213ENST00000565834 GIT1Q9Y2X7 761 aa20.17■□□□□ 0.82
COMMD4-213ENST00000565834 SOWAHDA6NJG2 315 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 MEIS3P2A8K0S8 358 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 CYP2C18P33260 490 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 SOX5P35711 763 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 GUCY2FP51841 1108 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 CCL23P55773 120 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 ZBTB6Q15916 424 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 ZNF699Q32M78 642 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 SCARA3Q6AZY7 606 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 FAM43BQ6ZT52 329 aaPredicted RBP20.16■□□□□ 0.82
COMMD4-213ENST00000565834 GPIHBP1Q8IV16 184 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 RNF169Q8NCN4 708 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 TAF4BQ92750 862 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 APBB2Q92870 758 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 KAT5Q92993 513 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 KREMEN1Q96MU8 473 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 RPS6KC1Q96S38 1066 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 CHP1Q99653 195 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 APOBEC3GQ9HC16 384 aaKnown RBP20.16■□□□□ 0.82
COMMD4-213ENST00000565834 ATF7P17544 494 aaPredicted RBP20.16■□□□□ 0.82
COMMD4-213ENST00000565834 IBSPP21815 317 aaPredicted RBP20.16■□□□□ 0.82
COMMD4-213ENST00000565834 POLR2BP30876 1174 aaKnown RBP20.16■□□□□ 0.82
COMMD4-213ENST00000565834 ARID5AQ03989 594 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 AGMOQ6ZNB7 445 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 SLC24A5Q71RS6 500 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 RTN4RL1Q86UN2 441 aaPredicted RBP20.16■□□□□ 0.82
COMMD4-213ENST00000565834 ECHDC2Q86YB7 292 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 DBF4BQ8NFT6 615 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 CXorf38Q8TB03 319 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 ZFP42Q96MM3 310 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 GPR88Q9GZN0 384 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 TSPYL2Q9H2G4 693 aaPredicted RBP20.16■□□□□ 0.82
COMMD4-213ENST00000565834 TUBGCP4Q9UGJ1 667 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 NUB1Q9Y5A7 615 aa20.16■□□□□ 0.82
COMMD4-213ENST00000565834 C9IYK1 514 aa20.15■□□□□ 0.82
COMMD4-213ENST00000565834 FERP16591 822 aa20.15■□□□□ 0.82
COMMD4-213ENST00000565834 TBXAS1P24557 533 aaPredicted RBP20.15■□□□□ 0.82
COMMD4-213ENST00000565834 MSNP26038 577 aaKnown RBP20.15■□□□□ 0.82
COMMD4-213ENST00000565834 MLH1P40692 756 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms