RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 LARP4BQ92615 738 aaKnown RBP17.1■□□□□ 0.33
CDH3-204ENST00000565453 PLEKHA5Q9HAU0 1116 aa17.1■□□□□ 0.33
CDH3-204ENST00000565453 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.1■□□□□ 0.33
CDH3-204ENST00000565453 TUBGCP4Q9UGJ1 667 aa17.1■□□□□ 0.33
CDH3-204ENST00000565453 SRPRBQ9Y5M8 271 aaKnown RBP17.1■□□□□ 0.33
CDH3-204ENST00000565453 ANHXE9PGG2 379 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 K7ENM7 598 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 SYN3O14994 580 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 NARSO43776 548 aaKnown RBP17.09■□□□□ 0.33
CDH3-204ENST00000565453 TRAK2O60296 914 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 ADRB2P07550 413 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 CLTAP09496 248 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 LAMP2P13473 410 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 SCP2P22307 547 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 MARCKSP29966 332 aaPredicted RBP17.09■□□□□ 0.33
CDH3-204ENST00000565453 DDIT3P35638 169 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 TNFSF9P41273 254 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 PTPN5P54829 565 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 NTHL1P78549 312 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 ZBTB6Q15916 424 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 UVSSAQ2YD98 709 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 SPECC1Q5M775 1068 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 VARS2Q5ST30 1063 aaKnown RBP17.09■□□□□ 0.33
CDH3-204ENST00000565453 ZBTB41Q5SVQ8 909 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 SLC39A4Q6P5W5 647 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 RTL10Q7L3V2 364 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 GET4Q7L5D6 327 aaPredicted RBP17.09■□□□□ 0.33
CDH3-204ENST00000565453 ALYREFQ86V81 257 aaKnown RBP17.09■□□□□ 0.33
CDH3-204ENST00000565453 TMEM105Q8N8V8 129 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 SLC7A14Q8TBB6 771 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 NXPE3Q969Y0 559 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 SUSD3Q96L08 255 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 MTMR6Q9Y217 621 aa17.09■□□□□ 0.33
CDH3-204ENST00000565453 MORC2Q9Y6X9 1032 aaPredicted RBP17.09■□□□□ 0.33
CDH3-204ENST00000565453 CCL16O15467 120 aa17.08■□□□□ 0.32
CDH3-204ENST00000565453 ABLIM3O94929 683 aa17.08■□□□□ 0.32
CDH3-204ENST00000565453 NPR3P17342 541 aa17.08■□□□□ 0.32
CDH3-204ENST00000565453 FSHRP23945 695 aa17.08■□□□□ 0.32
CDH3-204ENST00000565453 LRPAP1P30533 357 aa17.08■□□□□ 0.32
CDH3-204ENST00000565453 LIG4P49917 911 aa17.08■□□□□ 0.32
CDH3-204ENST00000565453 NUBP1P53384 320 aa17.08■□□□□ 0.32
CDH3-204ENST00000565453 GTF2BQ00403 316 aa17.08■□□□□ 0.32
CDH3-204ENST00000565453 ROR1Q01973 937 aa17.08■□□□□ 0.32
CDH3-204ENST00000565453 HTR4Q13639 388 aa17.08■□□□□ 0.32
CDH3-204ENST00000565453 CWF19L1Q69YN2 538 aaKnown RBP17.08■□□□□ 0.32
CDH3-204ENST00000565453 MAP4K3Q8IVH8 894 aa17.08■□□□□ 0.32
CDH3-204ENST00000565453 SLC44A3Q8N4M1 653 aa17.08■□□□□ 0.32
CDH3-204ENST00000565453 RASSF8Q8NHQ8 419 aa17.08■□□□□ 0.32
CDH3-204ENST00000565453 BICD1Q96G01 975 aa17.08■□□□□ 0.32
CDH3-204ENST00000565453 DOCK6Q96HP0 2047 aa17.08■□□□□ 0.32
CDH3-204ENST00000565453 A0A0B4J269 797 aa17.07■□□□□ 0.32
CDH3-204ENST00000565453 WDR27A2RRH5 827 aa17.07■□□□□ 0.32
CDH3-204ENST00000565453 HNRNPDLO14979 420 aaKnown RBP17.07■□□□□ 0.32
CDH3-204ENST00000565453 OGTO15294 1046 aa17.07■□□□□ 0.32
CDH3-204ENST00000565453 XYLBO75191 536 aa17.07■□□□□ 0.32
CDH3-204ENST00000565453 KRT18P05783 430 aaKnown RBP17.07■□□□□ 0.32
CDH3-204ENST00000565453 NMT1P30419 496 aaKnown RBP17.07■□□□□ 0.32
CDH3-204ENST00000565453 MATR3P43243 847 aaKnown RBP eCLIP17.07■□□□□ 0.32
CDH3-204ENST00000565453 SPAG1Q07617 926 aa17.07■□□□□ 0.32
CDH3-204ENST00000565453 ENOX2Q16206 610 aaKnown RBP17.07■□□□□ 0.32
CDH3-204ENST00000565453 KYAT1Q16773 422 aa17.07■□□□□ 0.32
CDH3-204ENST00000565453 ASTLQ6HA08 431 aaPredicted RBP17.07■□□□□ 0.32
CDH3-204ENST00000565453 ZNF461Q8TAF7 563 aa17.07■□□□□ 0.32
CDH3-204ENST00000565453 CLIC6Q96NY7 704 aa17.07■□□□□ 0.32
CDH3-204ENST00000565453 PHOX2BQ99453 314 aa17.07■□□□□ 0.32
CDH3-204ENST00000565453 ST6GALNAC4Q9H4F1 302 aa17.07■□□□□ 0.32
CDH3-204ENST00000565453 HCFC1R1Q9NWW0 138 aa17.07■□□□□ 0.32
CDH3-204ENST00000565453 DNMT3BQ9UBC3 853 aaKnown RBP17.07■□□□□ 0.32
CDH3-204ENST00000565453 CDH7Q9ULB5 785 aa17.07■□□□□ 0.32
CDH3-204ENST00000565453 NUB1Q9Y5A7 615 aa17.07■□□□□ 0.32
CDH3-204ENST00000565453 ZFP37Q9Y6Q3 630 aaPredicted RBP17.07■□□□□ 0.32
CDH3-204ENST00000565453 NOTCH4Q99466 2003 aa17.06■□□□□ 0.32
CDH3-204ENST00000565453 ARHGEF37A1IGU5 675 aa17.06■□□□□ 0.32
CDH3-204ENST00000565453 LACTBL1A8MY62 500 aa17.06■□□□□ 0.32
CDH3-204ENST00000565453 H7C4K7 107 aa17.06■□□□□ 0.32
CDH3-204ENST00000565453 K7ELQ4 463 aaPredicted RBP17.06■□□□□ 0.32
CDH3-204ENST00000565453 TBCAO75347 108 aaKnown RBP17.06■□□□□ 0.32
CDH3-204ENST00000565453 CYP3A5P20815 502 aa17.06■□□□□ 0.32
CDH3-204ENST00000565453 MRE11P49959 708 aa17.06■□□□□ 0.32
CDH3-204ENST00000565453 CLCN5P51795 746 aa17.06■□□□□ 0.32
CDH3-204ENST00000565453 ITFG1Q8TB96 612 aa17.06■□□□□ 0.32
CDH3-204ENST00000565453 USP28Q96RU2 1077 aa17.06■□□□□ 0.32
CDH3-204ENST00000565453 ZHX3Q9H4I2 956 aa17.06■□□□□ 0.32
CDH3-204ENST00000565453 STK17AQ9UEE5 414 aa17.06■□□□□ 0.32
CDH3-204ENST00000565453 FBXL5Q9UKA1 691 aa17.06■□□□□ 0.32
CDH3-204ENST00000565453 CPSF3Q9UKF6 684 aaKnown RBP17.06■□□□□ 0.32
CDH3-204ENST00000565453 UBQLN1Q9UMX0 589 aaKnown RBP17.06■□□□□ 0.32
CDH3-204ENST00000565453 PCDHB8Q9UN66 801 aa17.06■□□□□ 0.32
CDH3-204ENST00000565453 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.06■□□□□ 0.32
CDH3-204ENST00000565453 ANKRD63C9JTQ0 380 aa17.05■□□□□ 0.32
CDH3-204ENST00000565453 M0QZQ0 153 aa17.05■□□□□ 0.32
CDH3-204ENST00000565453 GALR2O43603 387 aaPredicted RBP17.05■□□□□ 0.32
CDH3-204ENST00000565453 SRFP11831 508 aa17.05■□□□□ 0.32
CDH3-204ENST00000565453 ABCD1P33897 745 aa17.05■□□□□ 0.32
CDH3-204ENST00000565453 MCM4P33991 863 aa17.05■□□□□ 0.32
CDH3-204ENST00000565453 AARSP49588 968 aaKnown RBP eCLIP17.05■□□□□ 0.32
CDH3-204ENST00000565453 PPP2R3AQ06190 1150 aa17.05■□□□□ 0.32
CDH3-204ENST00000565453 ZC2HC1CQ53FD0 456 aaPredicted RBP17.05■□□□□ 0.32
CDH3-204ENST00000565453 DDX12PQ92771 950 aa17.05■□□□□ 0.32
CDH3-204ENST00000565453 FGF13Q92913 245 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms