RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 TTC7BQ86TV6 843 aa5.69□□□□□ -1.5
CHD9-215ENST00000565442 RSPH3Q86UC2 560 aa5.69□□□□□ -1.5
CHD9-215ENST00000565442 VRK3Q8IV63 474 aa5.69□□□□□ -1.5
CHD9-215ENST00000565442 TRMT2AQ8IZ69 625 aaKnown RBP5.69□□□□□ -1.5
CHD9-215ENST00000565442 CMTM4Q8IZR5 234 aa5.69□□□□□ -1.5
CHD9-215ENST00000565442 ZGPATQ8N5A5 531 aaKnown RBP5.69□□□□□ -1.5
CHD9-215ENST00000565442 NSUN6Q8TEA1 469 aaKnown RBP5.69□□□□□ -1.5
CHD9-215ENST00000565442 SLC25A43Q8WUT9 341 aaPredicted RBP5.69□□□□□ -1.5
CHD9-215ENST00000565442 TMX3Q96JJ7 454 aa5.69□□□□□ -1.5
CHD9-215ENST00000565442 FAM193BQ96PV7 902 aaPredicted RBP5.69□□□□□ -1.5
CHD9-215ENST00000565442 CDC5LQ99459 802 aaKnown RBP5.69□□□□□ -1.5
CHD9-215ENST00000565442 LANCL2Q9NS86 450 aa5.69□□□□□ -1.5
CHD9-215ENST00000565442 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.69□□□□□ -1.5
CHD9-215ENST00000565442 AJAP1Q9UKB5 411 aaPredicted RBP5.69□□□□□ -1.5
CHD9-215ENST00000565442 PACSIN3Q9UKS6 424 aa5.69□□□□□ -1.5
CHD9-215ENST00000565442 MYBBP1AQ9BQG0 1328 aaKnown RBP5.69□□□□□ -1.5
CHD9-215ENST00000565442 CCDC194A0A1B0GVG4 234 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 UBE2QL1A1L167 161 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 A6NNZ2 444 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 KRTAP29-1A8MX34 341 aaPredicted RBP5.68□□□□□ -1.5
CHD9-215ENST00000565442 H3BML4 177 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 WNT10BO00744 389 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 NRP1O14786 923 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 SGTAO43765 313 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 FAM20BO75063 409 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 UBXN7O94888 489 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 AMY1AP04745 511 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 RPLP2P05387 115 aaKnown RBP5.68□□□□□ -1.5
CHD9-215ENST00000565442 MAP2K6P52564 334 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 NPEPPSP55786 919 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 MAP9Q49MG5 647 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 KHDC1Q4VXA5 237 aaKnown RBP5.68□□□□□ -1.5
CHD9-215ENST00000565442 CCDC157Q569K6 752 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 RHOUQ7L0Q8 258 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 CCAR1Q8IX12 1150 aaKnown RBP5.68□□□□□ -1.5
CHD9-215ENST00000565442 LENG9Q96B70 501 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 RGMAQ96B86 450 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 DMRTA2Q96SC8 542 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 CGRRF1Q99675 332 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 VRK1Q99986 396 aaPredicted RBP5.68□□□□□ -1.5
CHD9-215ENST00000565442 IL23AQ9NPF7 189 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 SLC52A1Q9NWF4 448 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 NR2E3Q9Y5X4 410 aa5.68□□□□□ -1.5
CHD9-215ENST00000565442 ZMYM3Q14202 1370 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 ZAR1LA6NP61 321 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 B3GALT2O43825 422 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 GPR32O75388 356 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 MAP4K4O95819 1239 aaPredicted RBP5.67□□□□□ -1.5
CHD9-215ENST00000565442 DDCP20711 480 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 FPR1P21462 350 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 PCSK1P29120 753 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 KRTAP10-9P60411 292 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 GALEQ14376 348 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 GSPT2Q8IYD1 628 aaKnown RBP5.67□□□□□ -1.5
CHD9-215ENST00000565442 CYFIP2Q96F07 1278 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 MRGPRX4Q96LA9 322 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 BBC3Q96PG8 261 aaPredicted RBP5.67□□□□□ -1.5
CHD9-215ENST00000565442 LRFN3Q9BTN0 628 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 GPR87Q9BY21 358 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 EPC1Q9H2F5 836 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 ARNT2Q9HBZ2 717 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 KMT5AQ9NQR1 393 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 TMEM140Q9NV12 185 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 RUVBL1Q9Y265 456 aaKnown RBP5.67□□□□□ -1.5
CHD9-215ENST00000565442 PCDHA3Q9Y5H8 950 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 ACTL7AQ9Y615 435 aa5.67□□□□□ -1.5
CHD9-215ENST00000565442 TUSC2O75896 110 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 STC2O76061 302 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 MYL1P05976 194 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 HTR1BP28222 390 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 GUCY1A2P33402 732 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 GZMKP49863 264 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 USP14P54578 494 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 ZNF280AP59817 542 aaPredicted RBP5.66□□□□□ -1.5
CHD9-215ENST00000565442 APBA1Q02410 837 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 NOGQ13253 232 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 HLTFQ14527 1009 aaKnown RBP eCLIP5.66□□□□□ -1.5
CHD9-215ENST00000565442 COLEC12Q5KU26 742 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 MFSD14BQ5SR56 506 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 THEMIS2Q5TEJ8 643 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 CCSAPQ6IQ19 270 aaPredicted RBP5.66□□□□□ -1.5
CHD9-215ENST00000565442 PPP4R4Q6NUP7 873 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 GADL1Q6ZQY3 521 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 SYNE4Q8N205 404 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 C3orf20Q8ND61 904 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 IFI44Q8TCB0 444 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 ARL8AQ96BM9 186 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 CEP95Q96GE4 821 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 MLST8Q9BVC4 326 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 B3GNT5Q9BYG0 378 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 ENKD1Q9H0I2 346 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 FAM204AQ9H8W3 233 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 ARMT1Q9H993 441 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 MAN1C1Q9NR34 630 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 FAM50BQ9Y247 325 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 STXBP5LQ9Y2K9 1186 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 XDHP47989 1333 aa5.66□□□□□ -1.5
CHD9-215ENST00000565442 TPP1O14773 563 aa5.65□□□□□ -1.5
CHD9-215ENST00000565442 SLC16A6O15403 523 aa5.65□□□□□ -1.5
CHD9-215ENST00000565442 RAP2AP10114 183 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms