RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 SLC16A4O15374 487 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 LRRN2O75325 713 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 GUCY2CP25092 1073 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 RPL9P32969 192 aaKnown RBP9.4□□□□□ -0.9
CAPN3-213ENST00000565173 YARSP54577 528 aaKnown RBP9.4□□□□□ -0.9
CAPN3-213ENST00000565173 SLC12A3P55017 1021 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 ROR1Q01973 937 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 SNW1Q13573 536 aaKnown RBP9.4□□□□□ -0.9
CAPN3-213ENST00000565173 SLC5A9Q2M3M2 681 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 SLC10A6Q3KNW5 377 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 PABPC1LQ4VXU2 614 aaKnown RBP9.4□□□□□ -0.9
CAPN3-213ENST00000565173 SLC44A4Q53GD3 710 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 SPECC1Q5M775 1068 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 VARS2Q5ST30 1063 aaKnown RBP9.4□□□□□ -0.9
CAPN3-213ENST00000565173 MPZL3Q6UWV2 235 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 MTSS1LQ765P7 747 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 C1orf210Q8IVY1 113 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 ADSSL1Q8N142 457 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 TMEM130Q8N3G9 435 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 SYT2Q8N9I0 419 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-213ENST00000565173 TMEM161BQ8NDZ6 487 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 PJA1Q8NG27 643 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 ACAP3Q96P50 834 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 TIPINQ9BVW5 301 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 CCDC94Q9BW85 323 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-213ENST00000565173 RAB34Q9BZG1 259 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 PLA2G2FQ9BZM2 168 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 HAPLN2Q9GZV7 340 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 AVENQ9NQS1 362 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-213ENST00000565173 SLC38A7Q9NVC3 462 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 MTF2Q9Y483 593 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-213ENST00000565173 MYH15Q9Y2K3 1946 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 SHISA7A6NL88 538 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 NRG2O14511 850 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-213ENST00000565173 SYN3O14994 580 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 TOM1L1O75674 476 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 SEC24AO95486 1093 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 RHOP08100 348 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 SP9P0CG40 484 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 MAPTP10636 758 aaKnown RBP9.39□□□□□ -0.91
CAPN3-213ENST00000565173 PLS3P13797 630 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 ATF2P15336 505 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 PTPN2P17706 415 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 ATP2C1P98194 919 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-213ENST00000565173 RAD51AP2Q09MP3 1159 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 SEZ6Q53EL9 994 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 ARSHQ5FYA8 562 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 PRSS36Q5K4E3 855 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 TCEAL8Q8IYN2 117 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 KCTD17Q8N5Z5 321 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 LRRC15Q8TF66 581 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 ING5Q8WYH8 240 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 KCNN1Q92952 543 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 SHDQ96IW2 340 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 SUSD3Q96L08 255 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 KXD1Q9BQD3 176 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 TCHPQ9BT92 498 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 GDE1Q9NZC3 331 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 MRPS23Q9Y3D9 190 aaKnown RBP9.39□□□□□ -0.91
CAPN3-213ENST00000565173 R4GN57 208 aa9.39□□□□□ -0.91
CAPN3-213ENST00000565173 NPHP3-ACAD11A0A0J9YXS1 232 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 KANSL1LA0AUZ9 987 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 ECI2O75521 394 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 CD2BP2O95400 341 aaKnown RBP9.38□□□□□ -0.91
CAPN3-213ENST00000565173 CEBPBP17676 345 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 CD72P21854 359 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 RFX1P22670 979 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 FCARP24071 287 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 CCR2P41597 374 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 PRKCQQ04759 706 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 MCL1Q07820 350 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 MLF2Q15773 248 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-213ENST00000565173 ZBTB6Q15916 424 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 TMEM119Q4V9L6 283 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 RILPL1Q5EBL4 403 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 TANGO2Q6ICL3 276 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 ZPBP2Q6X784 338 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 TCEAL4Q96EI5 215 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 MCRS1Q96EZ8 462 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 ZSWIM3Q96MP5 696 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 TBC1D32Q96NH3 1257 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 PLIN2Q99541 437 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 OSBPL6Q9BZF3 934 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 SEMA4AQ9H3S1 761 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 CYP4F11Q9HBI6 524 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 KCND2Q9NZV8 630 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 TUBGCP4Q9UGJ1 667 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 KCNG1Q9UIX4 513 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 FBXL5Q9UKA1 691 aa9.38□□□□□ -0.91
CAPN3-213ENST00000565173 CACNA1IQ9P0X4 2223 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 EP300Q09472 2414 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-213ENST00000565173 TTC26A0AVF1 554 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 VWA3AA6NCI4 1184 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 FAM170BA6NMN3 283 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 H7C4K7 107 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 CLDN3O15551 220 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 FAM189A1O60320 539 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 MOSPD3O75425 235 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 MICAL2O94851 1124 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 VNN2O95498 520 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms