RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 PODXLO00592 558 aa20.22■□□□□ 0.83
CLN6-204ENST00000564752 SLC26A4O43511 780 aa20.22■□□□□ 0.83
CLN6-204ENST00000564752 ANGPT1Q15389 498 aa20.22■□□□□ 0.83
CLN6-204ENST00000564752 PHLDB3Q6NSJ2 640 aa20.22■□□□□ 0.83
CLN6-204ENST00000564752 SYT2Q8N9I0 419 aaPredicted RBP20.22■□□□□ 0.83
CLN6-204ENST00000564752 TMEM161BQ8NDZ6 487 aa20.22■□□□□ 0.83
CLN6-204ENST00000564752 RASSF8Q8NHQ8 419 aa20.22■□□□□ 0.83
CLN6-204ENST00000564752 ITFG1Q8TB96 612 aa20.22■□□□□ 0.83
CLN6-204ENST00000564752 CALML4Q96GE6 196 aa20.22■□□□□ 0.83
CLN6-204ENST00000564752 ZBTB45Q96K62 511 aaPredicted RBP20.22■□□□□ 0.83
CLN6-204ENST00000564752 TBC1D17Q9HA65 648 aa20.22■□□□□ 0.83
CLN6-204ENST00000564752 CNTN3Q9P232 1028 aa20.22■□□□□ 0.83
CLN6-204ENST00000564752 DNMT3BQ9UBC3 853 aaKnown RBP20.22■□□□□ 0.83
CLN6-204ENST00000564752 PRR23AA6NEV1 266 aa20.21■□□□□ 0.83
CLN6-204ENST00000564752 MEFVO15553 781 aaPredicted RBP20.21■□□□□ 0.83
CLN6-204ENST00000564752 TOM1L1O75674 476 aa20.21■□□□□ 0.83
CLN6-204ENST00000564752 PLA2G4BP0C869 781 aa20.21■□□□□ 0.83
CLN6-204ENST00000564752 PLS3P13797 630 aa20.21■□□□□ 0.83
CLN6-204ENST00000564752 RPL9P32969 192 aaKnown RBP20.21■□□□□ 0.83
CLN6-204ENST00000564752 LONP1P36776 959 aaKnown RBP20.21■□□□□ 0.83
CLN6-204ENST00000564752 RAD51AP2Q09MP3 1159 aa20.21■□□□□ 0.83
CLN6-204ENST00000564752 RESTQ13127 1097 aa20.21■□□□□ 0.83
CLN6-204ENST00000564752 SLC8B1Q6J4K2 584 aa20.21■□□□□ 0.83
CLN6-204ENST00000564752 FRMD5Q7Z6J6 570 aa20.21■□□□□ 0.83
CLN6-204ENST00000564752 ZNF461Q8TAF7 563 aa20.21■□□□□ 0.83
CLN6-204ENST00000564752 ARHGEF3Q9NR81 526 aa20.21■□□□□ 0.83
CLN6-204ENST00000564752 HCFC1R1Q9NWW0 138 aa20.21■□□□□ 0.83
CLN6-204ENST00000564752 KCND2Q9NZV8 630 aa20.21■□□□□ 0.83
CLN6-204ENST00000564752 KCNH3Q9ULD8 1083 aa20.21■□□□□ 0.83
CLN6-204ENST00000564752 VWA8A3KMH1 1905 aa20.2■□□□□ 0.82
CLN6-204ENST00000564752 TBC1D4O60343 1298 aa20.2■□□□□ 0.82
CLN6-204ENST00000564752 ABLIM3O94929 683 aa20.2■□□□□ 0.82
CLN6-204ENST00000564752 RFX1P22670 979 aa20.2■□□□□ 0.82
CLN6-204ENST00000564752 SMTNP53814 917 aa20.2■□□□□ 0.82
CLN6-204ENST00000564752 SLC12A3P55017 1021 aa20.2■□□□□ 0.82
CLN6-204ENST00000564752 GPC5P78333 572 aa20.2■□□□□ 0.82
CLN6-204ENST00000564752 GRIN1Q05586 938 aa20.2■□□□□ 0.82
CLN6-204ENST00000564752 STRN3Q13033 797 aa20.2■□□□□ 0.82
CLN6-204ENST00000564752 PABPC1LQ4VXU2 614 aaKnown RBP20.2■□□□□ 0.82
CLN6-204ENST00000564752 VARS2Q5ST30 1063 aaKnown RBP20.2■□□□□ 0.82
CLN6-204ENST00000564752 MTSS1LQ765P7 747 aa20.2■□□□□ 0.82
CLN6-204ENST00000564752 C18orf25Q96B23 403 aaPredicted RBP20.2■□□□□ 0.82
CLN6-204ENST00000564752 MYH15Q9Y2K3 1946 aa20.19■□□□□ 0.82
CLN6-204ENST00000564752 DOCK6Q96HP0 2047 aa20.19■□□□□ 0.82
CLN6-204ENST00000564752 SYN3O14994 580 aa20.19■□□□□ 0.82
CLN6-204ENST00000564752 MAPTP10636 758 aaKnown RBP20.19■□□□□ 0.82
CLN6-204ENST00000564752 ROR1Q01973 937 aa20.19■□□□□ 0.82
CLN6-204ENST00000564752 MRPL58Q14197 206 aaKnown RBP20.19■□□□□ 0.82
CLN6-204ENST00000564752 SLC10A6Q3KNW5 377 aa20.19■□□□□ 0.82
CLN6-204ENST00000564752 HSCBQ8IWL3 235 aa20.19■□□□□ 0.82
CLN6-204ENST00000564752 NKD2Q969F2 451 aaPredicted RBP20.19■□□□□ 0.82
CLN6-204ENST00000564752 SNX21Q969T3 373 aa20.19■□□□□ 0.82
CLN6-204ENST00000564752 MTMR6Q9Y217 621 aa20.19■□□□□ 0.82
CLN6-204ENST00000564752 SIT1Q9Y3P8 196 aa20.19■□□□□ 0.82
CLN6-204ENST00000564752 CLIC4Q9Y696 253 aa20.19■□□□□ 0.82
CLN6-204ENST00000564752 ARHGEF37A1IGU5 675 aa20.18■□□□□ 0.82
CLN6-204ENST00000564752 HARSP12081 509 aaKnown RBP20.18■□□□□ 0.82
CLN6-204ENST00000564752 STARD6P59095 220 aa20.18■□□□□ 0.82
CLN6-204ENST00000564752 MCL1Q07820 350 aa20.18■□□□□ 0.82
CLN6-204ENST00000564752 NOLC1Q14978 699 aaKnown RBP eCLIP20.18■□□□□ 0.82
CLN6-204ENST00000564752 KARSQ15046 597 aaKnown RBP20.18■□□□□ 0.82
CLN6-204ENST00000564752 FAM173BQ6P4H8 233 aa20.18■□□□□ 0.82
CLN6-204ENST00000564752 ZPBP2Q6X784 338 aa20.18■□□□□ 0.82
CLN6-204ENST00000564752 NPAS3Q8IXF0 933 aa20.18■□□□□ 0.82
CLN6-204ENST00000564752 AVENQ9NQS1 362 aaPredicted RBP20.18■□□□□ 0.82
CLN6-204ENST00000564752 DLGAP2Q9P1A6 1054 aa20.18■□□□□ 0.82
CLN6-204ENST00000564752 ANKFY1Q9P2R3 1169 aa20.18■□□□□ 0.82
CLN6-204ENST00000564752 NUB1Q9Y5A7 615 aa20.18■□□□□ 0.82
CLN6-204ENST00000564752 NPHP3-ACAD11A0A0J9YXS1 232 aa20.17■□□□□ 0.82
CLN6-204ENST00000564752 WDR27A2RRH5 827 aa20.17■□□□□ 0.82
CLN6-204ENST00000564752 H7C4K7 107 aa20.17■□□□□ 0.82
CLN6-204ENST00000564752 CLDN3O15551 220 aa20.17■□□□□ 0.82
CLN6-204ENST00000564752 STX6O43752 255 aa20.17■□□□□ 0.82
CLN6-204ENST00000564752 DCNP07585 359 aaKnown RBP20.17■□□□□ 0.82
CLN6-204ENST00000564752 ATF2P15336 505 aa20.17■□□□□ 0.82
CLN6-204ENST00000564752 PLCG1P19174 1290 aa20.17■□□□□ 0.82
CLN6-204ENST00000564752 ELF1P32519 619 aa20.17■□□□□ 0.82
CLN6-204ENST00000564752 CACNB1Q02641 598 aaPredicted RBP20.17■□□□□ 0.82
CLN6-204ENST00000564752 PTPAQ15257 358 aa20.17■□□□□ 0.82
CLN6-204ENST00000564752 SEZ6Q53EL9 994 aa20.17■□□□□ 0.82
CLN6-204ENST00000564752 ARSHQ5FYA8 562 aa20.17■□□□□ 0.82
CLN6-204ENST00000564752 GPBP1Q86WP2 473 aa20.17■□□□□ 0.82
CLN6-204ENST00000564752 SHDQ96IW2 340 aa20.17■□□□□ 0.82
CLN6-204ENST00000564752 SUSD3Q96L08 255 aa20.17■□□□□ 0.82
CLN6-204ENST00000564752 ZSCAN16Q9H4T2 348 aaPredicted RBP20.17■□□□□ 0.82
CLN6-204ENST00000564752 FBXL5Q9UKA1 691 aa20.17■□□□□ 0.82
CLN6-204ENST00000564752 MRPS23Q9Y3D9 190 aaKnown RBP20.17■□□□□ 0.82
CLN6-204ENST00000564752 RHOP08100 348 aa20.16■□□□□ 0.82
CLN6-204ENST00000564752 PTPN2P17706 415 aa20.16■□□□□ 0.82
CLN6-204ENST00000564752 MARCKSP29966 332 aaPredicted RBP20.16■□□□□ 0.82
CLN6-204ENST00000564752 CEBPZQ03701 1054 aaKnown RBP20.16■□□□□ 0.82
CLN6-204ENST00000564752 DHX8Q14562 1220 aaKnown RBP20.16■□□□□ 0.82
CLN6-204ENST00000564752 SLC5A9Q2M3M2 681 aa20.16■□□□□ 0.82
CLN6-204ENST00000564752 SPECC1Q5M775 1068 aa20.16■□□□□ 0.82
CLN6-204ENST00000564752 TCEAL8Q8IYN2 117 aa20.16■□□□□ 0.82
CLN6-204ENST00000564752 KCNN1Q92952 543 aa20.16■□□□□ 0.82
CLN6-204ENST00000564752 HAPLN2Q9GZV7 340 aa20.16■□□□□ 0.82
CLN6-204ENST00000564752 PLEKHA5Q9HAU0 1116 aa20.16■□□□□ 0.82
CLN6-204ENST00000564752 GDE1Q9NZC3 331 aa20.16■□□□□ 0.82
CLN6-204ENST00000564752 LARSQ9P2J5 1176 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms