RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 DSG1Q02413 1049 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 UPP1Q16831 310 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 KIAA0319Q5VV43 1072 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 ANKRD54Q6NXT1 300 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 CD302Q8IX05 232 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 GLIS3Q8NEA6 775 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 VN1R2Q8NFZ6 395 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 NOC3LQ8WTT2 800 aaKnown RBP10.81□□□□□ -0.68
CDH1-206ENST00000564676 CCDC34Q96HJ3 373 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 CHST7Q9NS84 486 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 EXOC1Q9NV70 894 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 CLEC1BQ9P126 229 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 CPSF3Q9UKF6 684 aaKnown RBP10.81□□□□□ -0.68
CDH1-206ENST00000564676 UBQLN1Q9UMX0 589 aaKnown RBP10.81□□□□□ -0.68
CDH1-206ENST00000564676 NUB1Q9Y5A7 615 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 EIF3DO15371 548 aaKnown RBP eCLIP10.8□□□□□ -0.68
CDH1-206ENST00000564676 TEX28O15482 410 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 MBTPS2O43462 519 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 FAM189A1O60320 539 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 EFEMP2O95967 443 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 LDHAP00338 332 aaKnown RBP10.8□□□□□ -0.68
CDH1-206ENST00000564676 MYL1P05976 194 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 ADH1AP07327 375 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 IL9P15248 144 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 GARTP22102 1010 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 ADSSP30520 456 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 BRCC3P46736 316 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 SMAD4Q13485 552 aaKnown RBP10.8□□□□□ -0.68
CDH1-206ENST00000564676 KMT5BQ4FZB7 885 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 ARMCX5Q6P1M9 558 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 TMEM184AQ6ZMB5 413 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 KRBA2Q6ZNG9 492 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 NELFCDQ8IXH7 590 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 BEST2Q8NFU1 509 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 ZNF507Q8TCN5 953 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 SLC22A17Q8WUG5 538 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 CCDC47Q96A33 483 aaKnown RBP10.8□□□□□ -0.68
CDH1-206ENST00000564676 SAAL1Q96ER3 474 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 MSLNLQ96KJ4 702 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 TSPAN18Q96SJ8 248 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 UHRF1Q96T88 793 aaPredicted RBP10.8□□□□□ -0.68
CDH1-206ENST00000564676 FAM213AQ9BRX8 229 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 TTPALQ9BTX7 342 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 APOL5Q9BWW9 433 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 GOLPH3LQ9H4A5 285 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 PCIF1Q9H4Z3 704 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 SLC39A2Q9NP94 309 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.8□□□□□ -0.68
CDH1-206ENST00000564676 PLSCR2Q9NRY7 297 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 TUBGCP4Q9UGJ1 667 aa10.8□□□□□ -0.68
CDH1-206ENST00000564676 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.8□□□□□ -0.68
CDH1-206ENST00000564676 GOLGA8IPA6NC78 632 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 GOLGA8JA6NMD2 632 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 I3L4J1 428 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 KLRC4O43908 158 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 ADRB2P07550 413 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 NFICP08651 508 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 EPCAMP16422 314 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 HOXB8P17481 243 aaPredicted RBP10.79□□□□□ -0.68
CDH1-206ENST00000564676 CYP3A5P20815 502 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 IGFBP6P24592 240 aaPredicted RBP10.79□□□□□ -0.68
CDH1-206ENST00000564676 MCM4P33991 863 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 GUCY2FP51841 1108 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 POU5F1Q01860 360 aaKnown RBP10.79□□□□□ -0.68
CDH1-206ENST00000564676 CREMQ03060 361 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 EHHADHQ08426 723 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 KCNC3Q14003 757 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 TMEM132DQ14C87 1099 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 RTP2Q5QGT7 225 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 JADE1Q6IE81 842 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 SYCE2Q6PIF2 218 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 PRSS55Q6UWB4 352 aaPredicted RBP10.79□□□□□ -0.68
CDH1-206ENST00000564676 CD300LGQ6UXG3 332 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.79□□□□□ -0.68
CDH1-206ENST00000564676 EPM2AIP1Q7L775 607 aaPredicted RBP10.79□□□□□ -0.68
CDH1-206ENST00000564676 GLYCTKQ8IVS8 523 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 GPR65Q8IYL9 337 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 C3orf58Q8NDZ4 430 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 SCFD1Q8WVM8 642 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 NECAB3Q96P71 396 aaPredicted RBP10.79□□□□□ -0.68
CDH1-206ENST00000564676 CBWD1Q9BRT8 395 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 ASB7Q9H672 318 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 RXFP1Q9HBX9 757 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 DZANK1Q9NVP4 752 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 CHMP5Q9NZZ3 219 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 REV3LO60673 3130 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 UBE4BO95155 1302 aa10.79□□□□□ -0.68
CDH1-206ENST00000564676 KIAA0391O15091 583 aaKnown RBP10.78□□□□□ -0.68
CDH1-206ENST00000564676 EXTL3O43909 919 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 IL18RAPO95256 599 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 GLUD1P00367 558 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 RPN1P04843 607 aaKnown RBP10.78□□□□□ -0.68
CDH1-206ENST00000564676 RPL17P18621 184 aaKnown RBP10.78□□□□□ -0.68
CDH1-206ENST00000564676 FGFR3P22607 806 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 TKTP29401 623 aaKnown RBP10.78□□□□□ -0.68
CDH1-206ENST00000564676 LRPAP1P30533 357 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 HOXD13P35453 343 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 CLCN4P51793 760 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 PSMD2Q13200 908 aa10.78□□□□□ -0.68
CDH1-206ENST00000564676 SMAD2Q15796 467 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms