RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 MYCT1Q8N699 235 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 C11orf54Q9H0W9 315 aaPredicted RBP3.12□□□□□ -1.91
CHD9-209ENST00000564255 SLC6A15Q9H2J7 730 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 EPB41L4BQ9H329 900 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 PNMA2Q9UL42 364 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 PAXBP1Q9Y5B6 917 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 OAS3Q9Y6K5 1087 aaKnown RBP3.12□□□□□ -1.91
CHD9-209ENST00000564255 GOLGA6L3A6NEY3 463 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 SLC43A1O75387 559 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 CSTBP04080 98 aaKnown RBP3.12□□□□□ -1.91
CHD9-209ENST00000564255 JUNP05412 331 aaKnown RBP3.12□□□□□ -1.91
CHD9-209ENST00000564255 MTHFD1P11586 935 aaKnown RBP3.12□□□□□ -1.91
CHD9-209ENST00000564255 HDCP19113 662 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 FGFR2P21802 821 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 EEF1GP26641 437 aaKnown RBP3.12□□□□□ -1.91
CHD9-209ENST00000564255 MEOX1P50221 254 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 SOX8P57073 446 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 ARL13BQ3SXY8 428 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 C3orf38Q5JPI3 329 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 AGBL4Q5VU57 503 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 PGBD2Q6P3X8 592 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 PDZD4Q76G19 769 aaPredicted RBP3.12□□□□□ -1.91
CHD9-209ENST00000564255 ZDHHC14Q8IZN3 488 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 GIMAP8Q8ND71 665 aaPredicted RBP3.12□□□□□ -1.91
CHD9-209ENST00000564255 ZBTB8AQ96BR9 441 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 CARD11Q9BXL7 1154 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 SERHLQ9NQF3 203 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 RLIMQ9NVW2 624 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 MOCS1Q9NZB8 636 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 FAM30AQ9NZY2 134 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 LZTS1Q9Y250 596 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 PMF1-BGLAPU3KQ54 211 aa3.12□□□□□ -1.91
CHD9-209ENST00000564255 MBD3L4A6NDZ8 208 aaPredicted RBP3.11□□□□□ -1.91
CHD9-209ENST00000564255 MBD3L3A6NE82 208 aaPredicted RBP3.11□□□□□ -1.91
CHD9-209ENST00000564255 NRP1O14786 923 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 FFAR2O15552 330 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 ABHD16AO95870 558 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 HSD3B1P14060 373 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 PDIA3P30101 505 aaKnown RBP3.11□□□□□ -1.91
CHD9-209ENST00000564255 PTPN7P35236 360 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 LIMS1P48059 325 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 ALDH9A1P49189 494 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 ADCY7P51828 1080 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 RPS16P62249 146 aaKnown RBP3.11□□□□□ -1.91
CHD9-209ENST00000564255 HGFACQ04756 655 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 BIRC3Q13489 604 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 USP10Q14694 798 aaKnown RBP3.11□□□□□ -1.91
CHD9-209ENST00000564255 KIF22Q14807 665 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 STARD3Q14849 445 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 MFSD14BQ5SR56 506 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 ZFYVE27Q5T4F4 411 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 CIAPIN1Q6FI81 312 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 CATSPERGQ6ZRH7 1159 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 PRR23BQ6ZRT6 265 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 USP30Q70CQ3 517 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 CACNA2D3Q8IZS8 1091 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 OR6B3Q8NGW1 331 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 CYP2W1Q8TAV3 490 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 STON2Q8WXE9 905 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 FAM168AQ92567 244 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 SNX22Q96L94 193 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 EIF2AQ9BY44 585 aaKnown RBP3.11□□□□□ -1.91
CHD9-209ENST00000564255 OR10A2Q9H208 303 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 NSUN3Q9H649 340 aaKnown RBP3.11□□□□□ -1.91
CHD9-209ENST00000564255 TM7SF3Q9NS93 570 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.11□□□□□ -1.91
CHD9-209ENST00000564255 PMS2P1A4D2B8 440 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 SH3D21A4FU49 640 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 CLCA1A8K7I4 914 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 BTN3A1O00481 513 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 TOX4O94842 621 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 CD1AP06126 327 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 ANXA2P07355 339 aaKnown RBP3.11□□□□□ -1.91
CHD9-209ENST00000564255 MAPK10P53779 464 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 CCDC38Q502W7 563 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 ARTNQ5T4W7 220 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 KLHDC7AQ5VTJ3 777 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 CMTM4Q8IZR5 234 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 KLHL36Q8N4N3 616 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 CCDC33Q8N5R6 958 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 MDM1Q8TC05 714 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 FNIP1Q8TF40 1166 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 TRAPPC12Q8WVT3 735 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 RABGGTAQ92696 567 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 GCC1Q96CN9 775 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 CEP95Q96GE4 821 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 SENP7Q9BQF6 1050 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 KIAA1683Q9H0B3 1180 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 SACM1LQ9NTJ5 587 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 FAM53CQ9NYF3 392 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 C9orf78Q9NZ63 289 aaPredicted RBP3.11□□□□□ -1.91
CHD9-209ENST00000564255 SLC23A1Q9UHI7 598 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 ADAM29Q9UKF5 820 aa3.11□□□□□ -1.91
CHD9-209ENST00000564255 RBM8AQ9Y5S9 174 aaKnown RBP3.11□□□□□ -1.91
CHD9-209ENST00000564255 HNRNPDLO14979 420 aaKnown RBP3.1□□□□□ -1.91
CHD9-209ENST00000564255 AREL1O15033 823 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 SBK3P0C264 359 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 JUNBP17275 347 aaPredicted RBP3.1□□□□□ -1.91
CHD9-209ENST00000564255 ALDH1A3P47895 512 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 ATP2C1P98194 919 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms