RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 FOXD4L1Q9NU39 408 aa16.14■□□□□ 0.17
SNX29-203ENST00000564111 IGSF9Q9P2J2 1179 aa16.14■□□□□ 0.17
SNX29-203ENST00000564111 PCDHB8Q9UN66 801 aa16.14■□□□□ 0.17
SNX29-203ENST00000564111 GTF3C3Q9Y5Q9 886 aa16.14■□□□□ 0.17
SNX29-203ENST00000564111 A0A0B4J269 797 aa16.14■□□□□ 0.17
SNX29-203ENST00000564111 CCDC195A0A1B0GUA6 201 aa16.14■□□□□ 0.17
SNX29-203ENST00000564111 F13A1P00488 732 aa16.14■□□□□ 0.17
SNX29-203ENST00000564111 NUBP1P53384 320 aa16.14■□□□□ 0.17
SNX29-203ENST00000564111 CEBPZQ03701 1054 aaKnown RBP16.14■□□□□ 0.17
SNX29-203ENST00000564111 PPM1LQ5SGD2 360 aa16.14■□□□□ 0.17
SNX29-203ENST00000564111 HASPINQ8TF76 798 aa16.14■□□□□ 0.17
SNX29-203ENST00000564111 DDX12PQ92771 950 aa16.14■□□□□ 0.17
SNX29-203ENST00000564111 SUSD3Q96L08 255 aa16.14■□□□□ 0.17
SNX29-203ENST00000564111 ASB7Q9H672 318 aa16.14■□□□□ 0.17
SNX29-203ENST00000564111 STYXL1Q9Y6J8 313 aa16.14■□□□□ 0.17
SNX29-203ENST00000564111 TTC26A0AVF1 554 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 TMEM221A6NGB7 291 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 C2CD4DB7Z1M9 353 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 F8W810 466 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 M0R296 226 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 IL18RAPO95256 599 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 SLC10A6Q3KNW5 377 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 L1TD1Q5T7N2 865 aaKnown RBP16.13■□□□□ 0.17
SNX29-203ENST00000564111 IQUBQ8NA54 791 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 KIF12Q96FN5 646 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 PAAF1Q9BRP4 392 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 TMEM206Q9H813 350 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 MRPL44Q9H9J2 332 aaKnown RBP16.13■□□□□ 0.17
SNX29-203ENST00000564111 C11orf16Q9NQ32 467 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 FAM13BQ9NYF5 915 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 LDHAP00338 332 aaKnown RBP16.13■□□□□ 0.17
SNX29-203ENST00000564111 TPGS2Q68CL5 300 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 ZNF280DQ6N043 979 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 CNNM4Q6P4Q7 775 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 PRSS55Q6UWB4 352 aaPredicted RBP16.13■□□□□ 0.17
SNX29-203ENST00000564111 SFR1Q86XK3 245 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 PALB2Q86YC2 1186 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 ZBTB45Q96K62 511 aaPredicted RBP16.13■□□□□ 0.17
SNX29-203ENST00000564111 CLIC6Q96NY7 704 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 CLSTN3Q9BQT9 956 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.13■□□□□ 0.17
SNX29-203ENST00000564111 EPS15L1Q9UBC2 864 aa16.13■□□□□ 0.17
SNX29-203ENST00000564111 ANK1P16157 1881 aa16.12■□□□□ 0.17
SNX29-203ENST00000564111 UBE4BO95155 1302 aa16.12■□□□□ 0.17
SNX29-203ENST00000564111 FRMD3A2A2Y4 597 aa16.12■□□□□ 0.17
SNX29-203ENST00000564111 CXCL8P10145 99 aa16.12■□□□□ 0.17
SNX29-203ENST00000564111 MCM4P33991 863 aa16.12■□□□□ 0.17
SNX29-203ENST00000564111 ZNF720Q7Z2F6 126 aa16.12■□□□□ 0.17
SNX29-203ENST00000564111 SUGP1Q8IWZ8 645 aaKnown RBP16.12■□□□□ 0.17
SNX29-203ENST00000564111 FIZ1Q96SL8 496 aa16.12■□□□□ 0.17
SNX29-203ENST00000564111 C2CD2Q9Y426 696 aa16.12■□□□□ 0.17
SNX29-203ENST00000564111 SLC8B1Q6J4K2 584 aa16.11■□□□□ 0.17
SNX29-203ENST00000564111 LRRC15Q8TF66 581 aa16.11■□□□□ 0.17
SNX29-203ENST00000564111 CPSF3Q9UKF6 684 aaKnown RBP16.11■□□□□ 0.17
SNX29-203ENST00000564111 AGO2Q9UKV8 859 aaKnown RBP16.11■□□□□ 0.17
SNX29-203ENST00000564111 FAM86C2PA6NEL3 165 aa16.11■□□□□ 0.17
SNX29-203ENST00000564111 MYMKA6NI61 221 aa16.11■□□□□ 0.17
SNX29-203ENST00000564111 PPP1R37O75864 691 aa16.11■□□□□ 0.17
SNX29-203ENST00000564111 GARTP22102 1010 aa16.11■□□□□ 0.17
SNX29-203ENST00000564111 NMT1P30419 496 aaKnown RBP16.11■□□□□ 0.17
SNX29-203ENST00000564111 ELF1P32519 619 aa16.11■□□□□ 0.17
SNX29-203ENST00000564111 SOX4Q06945 474 aaPredicted RBP16.11■□□□□ 0.17
SNX29-203ENST00000564111 TMEM132DQ14C87 1099 aa16.11■□□□□ 0.17
SNX29-203ENST00000564111 SPECC1Q5M775 1068 aa16.11■□□□□ 0.17
SNX29-203ENST00000564111 FAM173BQ6P4H8 233 aa16.11■□□□□ 0.17
SNX29-203ENST00000564111 DYMQ7RTS9 669 aa16.11■□□□□ 0.17
SNX29-203ENST00000564111 RABGGTAQ92696 567 aa16.11■□□□□ 0.17
SNX29-203ENST00000564111 DNAJC19Q96DA6 116 aa16.11■□□□□ 0.17
SNX29-203ENST00000564111 B3GALT6Q96L58 329 aa16.11■□□□□ 0.17
SNX29-203ENST00000564111 ZMAT2Q96NC0 199 aaKnown RBP16.11■□□□□ 0.17
SNX29-203ENST00000564111 PANK4Q9NVE7 773 aa16.11■□□□□ 0.17
SNX29-203ENST00000564111 KCNH3Q9ULD8 1083 aa16.11■□□□□ 0.17
SNX29-203ENST00000564111 ATP6V1DQ9Y5K8 247 aa16.11■□□□□ 0.17
SNX29-203ENST00000564111 C8AP07357 584 aa16.1■□□□□ 0.17
SNX29-203ENST00000564111 TYMPP19971 482 aa16.1■□□□□ 0.17
SNX29-203ENST00000564111 TKTP29401 623 aaKnown RBP16.1■□□□□ 0.17
SNX29-203ENST00000564111 PLD1Q13393 1074 aa16.1■□□□□ 0.17
SNX29-203ENST00000564111 ZBTB6Q15916 424 aa16.1■□□□□ 0.17
SNX29-203ENST00000564111 VARS2Q5ST30 1063 aaKnown RBP16.1■□□□□ 0.17
SNX29-203ENST00000564111 ADALQ6DHV7 355 aa16.1■□□□□ 0.17
SNX29-203ENST00000564111 USP49Q70CQ1 688 aa16.1■□□□□ 0.17
SNX29-203ENST00000564111 ZNF707Q96C28 371 aaPredicted RBP16.1■□□□□ 0.17
SNX29-203ENST00000564111 STRA6Q9BX79 667 aa16.1■□□□□ 0.17
SNX29-203ENST00000564111 USP25Q9UHP3 1055 aa16.1■□□□□ 0.17
SNX29-203ENST00000564111 DSEQ9UL01 958 aa16.1■□□□□ 0.17
SNX29-203ENST00000564111 OR6C75A6NL08 312 aa16.1■□□□□ 0.17
SNX29-203ENST00000564111 M0QZQ0 153 aa16.1■□□□□ 0.17
SNX29-203ENST00000564111 FAM189A1O60320 539 aa16.1■□□□□ 0.17
SNX29-203ENST00000564111 HOXD11P31277 338 aaPredicted RBP16.1■□□□□ 0.17
SNX29-203ENST00000564111 SNRPFP62306 86 aaKnown RBP16.1■□□□□ 0.17
SNX29-203ENST00000564111 ENOX2Q16206 610 aaKnown RBP16.1■□□□□ 0.17
SNX29-203ENST00000564111 SPATA1Q5VX52 437 aa16.1■□□□□ 0.17
SNX29-203ENST00000564111 CD300LGQ6UXG3 332 aa16.1■□□□□ 0.17
SNX29-203ENST00000564111 POMGNT1Q8WZA1 660 aa16.1■□□□□ 0.17
SNX29-203ENST00000564111 IRF2BPLQ9H1B7 796 aa16.1■□□□□ 0.17
SNX29-203ENST00000564111 GOLGA2P5Q9HBQ8 144 aa16.1■□□□□ 0.17
SNX29-203ENST00000564111 AVENQ9NQS1 362 aaPredicted RBP16.1■□□□□ 0.17
SNX29-203ENST00000564111 CACNG4Q9UBN1 327 aa16.1■□□□□ 0.17
SNX29-203ENST00000564111 LACTBL1A8MY62 500 aa16.09■□□□□ 0.17
SNX29-203ENST00000564111 EIF3DO15371 548 aaKnown RBP eCLIP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms