RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 DGKKQ5KSL6 1271 aa17.61■□□□□ 0.41
RNF40-205ENST00000563909 CEP170P1Q96L14 293 aa17.61■□□□□ 0.41
RNF40-205ENST00000563909 HELZ2Q9BYK8 2649 aaKnown RBP17.61■□□□□ 0.41
RNF40-205ENST00000563909 WDR27A2RRH5 827 aa17.6■□□□□ 0.41
RNF40-205ENST00000563909 SLC38A8A6NNN8 435 aa17.6■□□□□ 0.41
RNF40-205ENST00000563909 ZNF197O14709 1029 aa17.6■□□□□ 0.41
RNF40-205ENST00000563909 ASAP2O43150 1006 aa17.6■□□□□ 0.41
RNF40-205ENST00000563909 LRG1P02750 347 aa17.6■□□□□ 0.41
RNF40-205ENST00000563909 KPNA1P52294 538 aaPredicted RBP17.6■□□□□ 0.41
RNF40-205ENST00000563909 AKAP17AQ02040 695 aaKnown RBP17.6■□□□□ 0.41
RNF40-205ENST00000563909 ELAVL2Q12926 359 aaKnown RBP17.6■□□□□ 0.41
RNF40-205ENST00000563909 NTRK3Q16288 839 aa17.6■□□□□ 0.41
RNF40-205ENST00000563909 SOWAHCQ53LP3 525 aaPredicted RBP17.6■□□□□ 0.41
RNF40-205ENST00000563909 DAB2IPQ5VWQ8 1189 aa17.6■□□□□ 0.41
RNF40-205ENST00000563909 C1orf228Q6PIY5 440 aa17.6■□□□□ 0.41
RNF40-205ENST00000563909 FERMT3Q86UX7 667 aa17.6■□□□□ 0.41
RNF40-205ENST00000563909 EXOC8Q8IYI6 725 aa17.6■□□□□ 0.41
RNF40-205ENST00000563909 TRIM22Q8IYM9 498 aa17.6■□□□□ 0.41
RNF40-205ENST00000563909 BICD2Q8TD16 824 aa17.6■□□□□ 0.41
RNF40-205ENST00000563909 DEPDC1BQ8WUY9 529 aa17.6■□□□□ 0.41
RNF40-205ENST00000563909 GTF3C6Q969F1 213 aa17.6■□□□□ 0.41
RNF40-205ENST00000563909 RNF26Q9BY78 433 aaPredicted RBP17.6■□□□□ 0.41
RNF40-205ENST00000563909 DHX33Q9H6R0 707 aaKnown RBP17.6■□□□□ 0.41
RNF40-205ENST00000563909 BPTFQ12830 3046 aa17.59■□□□□ 0.41
RNF40-205ENST00000563909 INO80B-WBP1J3KQ70 363 aa17.59■□□□□ 0.41
RNF40-205ENST00000563909 ARNTLO00327 626 aa17.59■□□□□ 0.41
RNF40-205ENST00000563909 PRPF3O43395 683 aaKnown RBP17.59■□□□□ 0.41
RNF40-205ENST00000563909 MICAL2O94851 1124 aa17.59■□□□□ 0.41
RNF40-205ENST00000563909 LARGE1O95461 756 aa17.59■□□□□ 0.41
RNF40-205ENST00000563909 NPTXRO95502 500 aa17.59■□□□□ 0.41
RNF40-205ENST00000563909 CEACAM1P13688 526 aa17.59■□□□□ 0.41
RNF40-205ENST00000563909 ARF4P18085 180 aaPredicted RBP17.59■□□□□ 0.41
RNF40-205ENST00000563909 CCR2P41597 374 aa17.59■□□□□ 0.41
RNF40-205ENST00000563909 USP11P51784 963 aa17.59■□□□□ 0.41
RNF40-205ENST00000563909 SSRP1Q08945 709 aaKnown RBP17.59■□□□□ 0.41
RNF40-205ENST00000563909 SPIRE1Q08AE8 756 aa17.59■□□□□ 0.41
RNF40-205ENST00000563909 B3GNT9Q6UX72 402 aa17.59■□□□□ 0.41
RNF40-205ENST00000563909 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.59■□□□□ 0.41
RNF40-205ENST00000563909 CDR2LQ86X02 465 aaPredicted RBP17.59■□□□□ 0.41
RNF40-205ENST00000563909 MFSD6LQ8IWD5 586 aa17.59■□□□□ 0.41
RNF40-205ENST00000563909 NECAB1Q8N987 351 aa17.59■□□□□ 0.41
RNF40-205ENST00000563909 TCP11Q8WWU5 503 aa17.59■□□□□ 0.41
RNF40-205ENST00000563909 MSANTD3Q96H12 275 aa17.59■□□□□ 0.41
RNF40-205ENST00000563909 MTRRQ9UBK8 725 aa17.59■□□□□ 0.41
RNF40-205ENST00000563909 MAST4O15021 2626 aa17.59■□□□□ 0.41
RNF40-205ENST00000563909 ARHGEF37A1IGU5 675 aa17.58■□□□□ 0.4
RNF40-205ENST00000563909 PRRG1O14668 218 aa17.58■□□□□ 0.4
RNF40-205ENST00000563909 EXTL3O43909 919 aa17.58■□□□□ 0.4
RNF40-205ENST00000563909 RFC5P40937 340 aa17.58■□□□□ 0.4
RNF40-205ENST00000563909 PTENP60484 403 aa17.58■□□□□ 0.4
RNF40-205ENST00000563909 TXNDC11Q6PKC3 985 aa17.58■□□□□ 0.4
RNF40-205ENST00000563909 PDZD4Q76G19 769 aaPredicted RBP17.58■□□□□ 0.4
RNF40-205ENST00000563909 ZC3H10Q96K80 434 aaKnown RBP17.58■□□□□ 0.4
RNF40-205ENST00000563909 SLC26A6Q9BXS9 759 aa17.58■□□□□ 0.4
RNF40-205ENST00000563909 C8orf33Q9H7E9 229 aaPredicted RBP17.58■□□□□ 0.4
RNF40-205ENST00000563909 ZMYM2Q9UBW7 1377 aa17.57■□□□□ 0.4
RNF40-205ENST00000563909 FGFR3P22607 806 aa17.57■□□□□ 0.4
RNF40-205ENST00000563909 ELF1P32519 619 aa17.57■□□□□ 0.4
RNF40-205ENST00000563909 QARSP47897 775 aaKnown RBP17.57■□□□□ 0.4
RNF40-205ENST00000563909 EMC2Q15006 297 aa17.57■□□□□ 0.4
RNF40-205ENST00000563909 AMHR2Q16671 573 aa17.57■□□□□ 0.4
RNF40-205ENST00000563909 CYP4A22Q5TCH4 519 aa17.57■□□□□ 0.4
RNF40-205ENST00000563909 KIAA1211LQ6NV74 962 aa17.57■□□□□ 0.4
RNF40-205ENST00000563909 SLC27A1Q6PCB7 646 aa17.57■□□□□ 0.4
RNF40-205ENST00000563909 YAF2Q8IY57 180 aa17.57■□□□□ 0.4
RNF40-205ENST00000563909 CCDC148Q8NFR7 591 aa17.57■□□□□ 0.4
RNF40-205ENST00000563909 TTC8Q8TAM2 541 aa17.57■□□□□ 0.4
RNF40-205ENST00000563909 ZSCAN18Q8TBC5 510 aaPredicted RBP17.57■□□□□ 0.4
RNF40-205ENST00000563909 FAM200AQ8TCP9 573 aa17.57■□□□□ 0.4
RNF40-205ENST00000563909 SPAG17Q6Q759 2223 aa17.57■□□□□ 0.4
RNF40-205ENST00000563909 NCANO14594 1321 aa17.56■□□□□ 0.4
RNF40-205ENST00000563909 HEPACAM2A8MVW5 462 aa17.56■□□□□ 0.4
RNF40-205ENST00000563909 SPECC1L-ADORA2AF8WAN1 911 aa17.56■□□□□ 0.4
RNF40-205ENST00000563909 B4GALT5O43286 388 aa17.56■□□□□ 0.4
RNF40-205ENST00000563909 CD2BP2O95400 341 aaKnown RBP17.56■□□□□ 0.4
RNF40-205ENST00000563909 MBTD1Q05BQ5 628 aa17.56■□□□□ 0.4
RNF40-205ENST00000563909 Q4G0T1 1027 aa17.56■□□□□ 0.4
RNF40-205ENST00000563909 SYNPOQ8N3V7 929 aa17.56■□□□□ 0.4
RNF40-205ENST00000563909 ZNF461Q8TAF7 563 aa17.56■□□□□ 0.4
RNF40-205ENST00000563909 TRPV4Q9HBA0 871 aa17.56■□□□□ 0.4
RNF40-205ENST00000563909 NEUROG3Q9Y4Z2 214 aa17.56■□□□□ 0.4
RNF40-205ENST00000563909 PPME1Q9Y570 386 aa17.56■□□□□ 0.4
RNF40-205ENST00000563909 BACE2Q9Y5Z0 518 aa17.56■□□□□ 0.4
RNF40-205ENST00000563909 CCDC163A0A0D9SF12 145 aa17.55■□□□□ 0.4
RNF40-205ENST00000563909 MYBPHLA2RUH7 354 aa17.55■□□□□ 0.4
RNF40-205ENST00000563909 EML1O00423 815 aa17.55■□□□□ 0.4
RNF40-205ENST00000563909 PTGESO14684 152 aa17.55■□□□□ 0.4
RNF40-205ENST00000563909 HYAL3O43820 417 aaPredicted RBP17.55■□□□□ 0.4
RNF40-205ENST00000563909 AKAP3O75969 853 aa17.55■□□□□ 0.4
RNF40-205ENST00000563909 DEXIO95424 95 aa17.55■□□□□ 0.4
RNF40-205ENST00000563909 CAVIN2O95810 425 aa17.55■□□□□ 0.4
RNF40-205ENST00000563909 THP07101 528 aa17.55■□□□□ 0.4
RNF40-205ENST00000563909 GJA1P17302 382 aa17.55■□□□□ 0.4
RNF40-205ENST00000563909 CSRP1P21291 193 aaKnown RBP17.55■□□□□ 0.4
RNF40-205ENST00000563909 IGFBP6P24592 240 aaPredicted RBP17.55■□□□□ 0.4
RNF40-205ENST00000563909 CREB5Q02930 508 aa17.55■□□□□ 0.4
RNF40-205ENST00000563909 CCINQ13939 588 aa17.55■□□□□ 0.4
RNF40-205ENST00000563909 MXD4Q14582 209 aaPredicted RBP17.55■□□□□ 0.4
RNF40-205ENST00000563909 PON2Q15165 354 aa17.55■□□□□ 0.4
RNF40-205ENST00000563909 PLK5Q496M5 336 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms