RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 JADE1Q6IE81 842 aa20.86■□□□□ 0.93
SPSB3-204ENST00000563741 GJB7Q6PEY0 223 aa20.86■□□□□ 0.93
SPSB3-204ENST00000563741 TMEM139Q8IV31 216 aa20.86■□□□□ 0.93
SPSB3-204ENST00000563741 NLRC4Q9NPP4 1024 aa20.86■□□□□ 0.93
SPSB3-204ENST00000563741 FAM105AQ9NUU6 356 aa20.86■□□□□ 0.93
SPSB3-204ENST00000563741 AJAP1Q9UKB5 411 aaPredicted RBP20.86■□□□□ 0.93
SPSB3-204ENST00000563741 NBNO60934 754 aa20.85■□□□□ 0.93
SPSB3-204ENST00000563741 CXCL10P02778 98 aa20.85■□□□□ 0.93
SPSB3-204ENST00000563741 AKAP5P24588 427 aa20.85■□□□□ 0.93
SPSB3-204ENST00000563741 DUOXA2Q1HG44 320 aa20.85■□□□□ 0.93
SPSB3-204ENST00000563741 CACNA2D4Q7Z3S7 1137 aa20.85■□□□□ 0.93
SPSB3-204ENST00000563741 APOL6Q9BWW8 343 aa20.85■□□□□ 0.93
SPSB3-204ENST00000563741 NAA15Q9BXJ9 866 aaKnown RBP20.85■□□□□ 0.93
SPSB3-204ENST00000563741 IFIH1Q9BYX4 1025 aaKnown RBP20.85■□□□□ 0.93
SPSB3-204ENST00000563741 RNF39Q9H2S5 420 aa20.85■□□□□ 0.93
SPSB3-204ENST00000563741 PLEKHA5Q9HAU0 1116 aa20.85■□□□□ 0.93
SPSB3-204ENST00000563741 CXXC1Q9P0U4 656 aaPredicted RBP20.85■□□□□ 0.93
SPSB3-204ENST00000563741 PCDHB2Q9Y5E7 798 aa20.85■□□□□ 0.93
SPSB3-204ENST00000563741 HLA-DRAP01903 254 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 TMEM191BP0C7N4 346 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 ZSCAN20P17040 1043 aaPredicted RBP20.84■□□□□ 0.93
SPSB3-204ENST00000563741 PIK3CAP42336 1068 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 YARSP54577 528 aaKnown RBP20.84■□□□□ 0.93
SPSB3-204ENST00000563741 E4F1Q66K89 784 aaPredicted RBP20.84■□□□□ 0.93
SPSB3-204ENST00000563741 IQCEQ6IPM2 695 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 PHLDB3Q6NSJ2 640 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 TRAPPC11Q7Z392 1133 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 CD302Q8IX05 232 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 ZNF397Q8NF99 534 aaPredicted RBP20.84■□□□□ 0.93
SPSB3-204ENST00000563741 OR8K1Q8NGG5 319 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 TRAIPQ9BWF2 469 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 CXCL16Q9H2A7 254 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 C2CD2Q9Y426 696 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 LRRC53A6NM62 1247 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 FECHP22830 423 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 TMEM132DQ14C87 1099 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 SCARA3Q6AZY7 606 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 PDXDC1Q6P996 788 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 ALKAL1Q6UXT8 129 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 RRAGAQ7L523 313 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 CCDC112Q8NEF3 446 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.84■□□□□ 0.933e-7■■■■■ 371.5
SPSB3-204ENST00000563741 CNTN3Q9P232 1028 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 SLC4A7Q9Y6M7 1214 aa20.84■□□□□ 0.93
SPSB3-204ENST00000563741 ZBBXA8MT70 800 aa20.83■□□□□ 0.92
SPSB3-204ENST00000563741 SLC34A2O95436 690 aa20.83■□□□□ 0.92
SPSB3-204ENST00000563741 SKILP12757 684 aa20.83■□□□□ 0.92
SPSB3-204ENST00000563741 RFX1P22670 979 aa20.83■□□□□ 0.92
SPSB3-204ENST00000563741 NCOA4Q13772 614 aa20.83■□□□□ 0.92
SPSB3-204ENST00000563741 ARHGEF19Q8IW93 802 aa20.83■□□□□ 0.92
SPSB3-204ENST00000563741 ANKRD36BP1Q96IX9 119 aa20.83■□□□□ 0.92
SPSB3-204ENST00000563741 BAG1Q99933 345 aaPredicted RBP20.83■□□□□ 0.92
SPSB3-204ENST00000563741 ADAM2Q99965 735 aa20.83■□□□□ 0.92
SPSB3-204ENST00000563741 PI4K2AQ9BTU6 479 aa20.83■□□□□ 0.92
SPSB3-204ENST00000563741 RALGAPA2Q2PPJ7 1873 aa20.83■□□□□ 0.92
SPSB3-204ENST00000563741 BAIAP3O94812 1187 aa20.82■□□□□ 0.92
SPSB3-204ENST00000563741 TNNC2P02585 160 aa20.82■□□□□ 0.92
SPSB3-204ENST00000563741 JAM2P57087 298 aa20.82■□□□□ 0.92
SPSB3-204ENST00000563741 RAPGEF1Q13905 1077 aa20.82■□□□□ 0.92
SPSB3-204ENST00000563741 MEA1Q16626 185 aa20.82■□□□□ 0.92
SPSB3-204ENST00000563741 FAM109BQ6ICB4 259 aaPredicted RBP20.82■□□□□ 0.92
SPSB3-204ENST00000563741 CNKSR3Q6P9H4 555 aa20.82■□□□□ 0.92
SPSB3-204ENST00000563741 C1orf127Q8N9H9 656 aa20.82■□□□□ 0.92
SPSB3-204ENST00000563741 ELMO3Q96BJ8 720 aa20.82■□□□□ 0.92
SPSB3-204ENST00000563741 KIF12Q96FN5 646 aa20.82■□□□□ 0.92
SPSB3-204ENST00000563741 ZMAT2Q96NC0 199 aaKnown RBP20.82■□□□□ 0.92
SPSB3-204ENST00000563741 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.82■□□□□ 0.92
SPSB3-204ENST00000563741 PARP2Q9UGN5 583 aa20.82■□□□□ 0.92
SPSB3-204ENST00000563741 DNAJC12Q9UKB3 198 aa20.82■□□□□ 0.92
SPSB3-204ENST00000563741 PLAGL2Q9UPG8 496 aa20.82■□□□□ 0.92
SPSB3-204ENST00000563741 ZKSCAN5Q9Y2L8 839 aa20.82■□□□□ 0.92
SPSB3-204ENST00000563741 DAAM1Q9Y4D1 1078 aa20.82■□□□□ 0.92
SPSB3-204ENST00000563741 CITO14578 2027 aa20.82■□□□□ 0.92
SPSB3-204ENST00000563741 MEIS3P2A8K0S8 358 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 ZC3H11AO75152 810 aaKnown RBP eCLIP20.81■□□□□ 0.92
SPSB3-204ENST00000563741 PHACTR2O75167 634 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 HNRNPH3P31942 346 aaKnown RBP20.81■□□□□ 0.92
SPSB3-204ENST00000563741 RAB27AP51159 221 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 XKR4Q5GH76 650 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 WDR59Q6PJI9 974 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 NT5DC4Q86YG4 428 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 TMEM130Q8N3G9 435 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 NT5C1BQ96P26 610 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 KLK14Q9P0G3 267 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 SIX4Q9UIU6 781 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 DERAQ9Y315 318 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 A0A0U1RQF3 1178 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 ZNF623O75123 536 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 GLRA4Q5JXX5 417 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 CXorf38Q8TB03 319 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 HELQQ8TDG4 1101 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 LINC01599Q8WXQ3 324 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 SPAG5Q96R06 1193 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 PYCARDQ9ULZ3 195 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 MYO6Q9UM54 1294 aa20.81■□□□□ 0.92
SPSB3-204ENST00000563741 GRXCR1A8MXD5 290 aa20.8■□□□□ 0.92
SPSB3-204ENST00000563741 F8VZ95 297 aa20.8■□□□□ 0.92
SPSB3-204ENST00000563741 CST3P01034 146 aaPredicted RBP20.8■□□□□ 0.92
SPSB3-204ENST00000563741 ATF7P17544 494 aaPredicted RBP20.8■□□□□ 0.92
SPSB3-204ENST00000563741 MRPL10Q7Z7H8 261 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms