RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 FXR2P51116 673 aaKnown RBP eCLIP20.49■□□□□ 0.87
NME3-204ENST00000563498 NEK4P51957 841 aa20.49■□□□□ 0.87
NME3-204ENST00000563498 SOX4Q06945 474 aaPredicted RBP20.49■□□□□ 0.87
NME3-204ENST00000563498 PRSS36Q5K4E3 855 aa20.49■□□□□ 0.87
NME3-204ENST00000563498 TCEAL8Q8IYN2 117 aa20.49■□□□□ 0.87
NME3-204ENST00000563498 PLA2G2FQ9BZM2 168 aa20.49■□□□□ 0.87
NME3-204ENST00000563498 CDT1Q9H211 546 aa20.49■□□□□ 0.87
NME3-204ENST00000563498 NCDNQ9UBB6 729 aa20.49■□□□□ 0.87
NME3-204ENST00000563498 WDR27A2RRH5 827 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 PRRG1O14668 218 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 LILRB5O75023 590 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 KCNE1P15382 129 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 CEBPBP17676 345 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 TRAPPC10P48553 1259 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 ADCY1Q08828 1119 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 ST3GAL1Q11201 340 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 FZD5Q13467 585 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 ECM1Q16610 540 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 TANGO2Q6ICL3 276 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 POTEHQ6S545 545 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 CEP120Q8N960 986 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 ACO2Q99798 780 aaKnown RBP20.48■□□□□ 0.87
NME3-204ENST00000563498 FAM126AQ9BYI3 521 aaPredicted RBP20.48■□□□□ 0.87
NME3-204ENST00000563498 EPC1Q9H2F5 836 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 TMEM134Q9H6X4 195 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 POLD4Q9HCU8 107 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 PRMT8Q9NR22 394 aaPredicted RBP20.48■□□□□ 0.87
NME3-204ENST00000563498 STK24Q9Y6E0 443 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 TRIP11Q15643 1979 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 GPR179Q6PRD1 2367 aa20.48■□□□□ 0.87
NME3-204ENST00000563498 SHISA7A6NL88 538 aa20.47■□□□□ 0.87
NME3-204ENST00000563498 H7C4K7 107 aa20.47■□□□□ 0.87
NME3-204ENST00000563498 PODXLO00592 558 aa20.47■□□□□ 0.87
NME3-204ENST00000563498 ZNF197O14709 1029 aa20.47■□□□□ 0.87
NME3-204ENST00000563498 SDHBP21912 280 aa20.47■□□□□ 0.87
NME3-204ENST00000563498 FCARP24071 287 aa20.47■□□□□ 0.87
NME3-204ENST00000563498 RPL9P32969 192 aaKnown RBP20.47■□□□□ 0.87
NME3-204ENST00000563498 GUCY1B3Q02153 619 aa20.47■□□□□ 0.87
NME3-204ENST00000563498 MRPL58Q14197 206 aaKnown RBP20.47■□□□□ 0.87
NME3-204ENST00000563498 ZNF568Q3ZCX4 644 aa20.47■□□□□ 0.87
NME3-204ENST00000563498 TTC38Q5R3I4 469 aa20.47■□□□□ 0.87
NME3-204ENST00000563498 TPGS2Q68CL5 300 aa20.47■□□□□ 0.87
NME3-204ENST00000563498 MAMSTRQ6ZN01 415 aa20.47■□□□□ 0.87
NME3-204ENST00000563498 SECISBP2LQ93073 1101 aaKnown RBP20.47■□□□□ 0.87
NME3-204ENST00000563498 C8orf76Q96K31 380 aa20.47■□□□□ 0.87
NME3-204ENST00000563498 MRPL4Q9BYD3 311 aaKnown RBP20.47■□□□□ 0.87
NME3-204ENST00000563498 HEBP1Q9NRV9 189 aa20.47■□□□□ 0.87
NME3-204ENST00000563498 LRWD1Q9UFC0 647 aa20.47■□□□□ 0.87
NME3-204ENST00000563498 MAFFQ9ULX9 164 aa20.47■□□□□ 0.87
NME3-204ENST00000563498 KIAA1024Q9UPX6 916 aa20.47■□□□□ 0.87
NME3-204ENST00000563498 MAN2B1O00754 1011 aa20.46■□□□□ 0.87
NME3-204ENST00000563498 MCF2P10911 925 aa20.46■□□□□ 0.87
NME3-204ENST00000563498 NPTX2P47972 431 aa20.46■□□□□ 0.87
NME3-204ENST00000563498 PDIA5Q14554 519 aa20.46■□□□□ 0.87
NME3-204ENST00000563498 RSPO4Q2I0M5 234 aaPredicted RBP20.46■□□□□ 0.87
NME3-204ENST00000563498 C4orf32Q8N8J7 132 aa20.46■□□□□ 0.87
NME3-204ENST00000563498 ZMAT2Q96NC0 199 aaKnown RBP20.46■□□□□ 0.87
NME3-204ENST00000563498 CORO1BQ9BR76 489 aa20.46■□□□□ 0.87
NME3-204ENST00000563498 IER2Q9BTL4 223 aa20.46■□□□□ 0.87
NME3-204ENST00000563498 CYP4F11Q9HBI6 524 aa20.46■□□□□ 0.87
NME3-204ENST00000563498 ZFP14Q9HCL3 533 aa20.46■□□□□ 0.87
NME3-204ENST00000563498 TRPV5Q9NQA5 729 aa20.46■□□□□ 0.87
NME3-204ENST00000563498 CNTN3Q9P232 1028 aa20.46■□□□□ 0.87
NME3-204ENST00000563498 ARHGAP28Q9P2N2 729 aa20.46■□□□□ 0.87
NME3-204ENST00000563498 INSL5Q9Y5Q6 135 aa20.46■□□□□ 0.87
NME3-204ENST00000563498 CCDC169A6NNP5 214 aa20.45■□□□□ 0.86
NME3-204ENST00000563498 PROZP22891 400 aa20.45■□□□□ 0.86
NME3-204ENST00000563498 PEX3P56589 373 aa20.45■□□□□ 0.86
NME3-204ENST00000563498 OSTNP61366 133 aa20.45■□□□□ 0.86
NME3-204ENST00000563498 DMP1Q13316 513 aaPredicted RBP20.45■□□□□ 0.86
NME3-204ENST00000563498 FAM78AQ5JUQ0 283 aa20.45■□□□□ 0.86
NME3-204ENST00000563498 PDZD4Q76G19 769 aaPredicted RBP20.45■□□□□ 0.86
NME3-204ENST00000563498 ZNF687Q8N1G0 1237 aa20.45■□□□□ 0.86
NME3-204ENST00000563498 ACAP3Q96P50 834 aa20.45■□□□□ 0.86
NME3-204ENST00000563498 LLPHQ9BRT6 129 aaKnown RBP20.45■□□□□ 0.86
NME3-204ENST00000563498 TRMT61BQ9BVS5 477 aaKnown RBP20.45■□□□□ 0.86
NME3-204ENST00000563498 BRD9Q9H8M2 597 aa20.45■□□□□ 0.86
NME3-204ENST00000563498 DDX19AQ9NUU7 478 aaKnown RBP20.45■□□□□ 0.86
NME3-204ENST00000563498 FBXL5Q9UKA1 691 aa20.45■□□□□ 0.86
NME3-204ENST00000563498 SMG5Q9UPR3 1016 aaKnown RBP20.45■□□□□ 0.86
NME3-204ENST00000563498 RBM19Q9Y4C8 960 aaKnown RBP20.45■□□□□ 0.86
NME3-204ENST00000563498 NUB1Q9Y5A7 615 aa20.45■□□□□ 0.86
NME3-204ENST00000563498 EIF5BO60841 1220 aaKnown RBP20.44■□□□□ 0.86
NME3-204ENST00000563498 SEC24AO95486 1093 aa20.44■□□□□ 0.86
NME3-204ENST00000563498 ARPP19P56211 112 aa20.44■□□□□ 0.86
NME3-204ENST00000563498 MTAPQ13126 283 aa20.44■□□□□ 0.86
NME3-204ENST00000563498 CYP4A22Q5TCH4 519 aa20.44■□□□□ 0.86
NME3-204ENST00000563498 TAS1R3Q7RTX0 852 aa20.44■□□□□ 0.86
NME3-204ENST00000563498 DAW1Q8N136 415 aa20.44■□□□□ 0.86
NME3-204ENST00000563498 ELMOD1Q8N336 334 aa20.44■□□□□ 0.86
NME3-204ENST00000563498 IGSF22Q8N9C0 903 aa20.44■□□□□ 0.86
NME3-204ENST00000563498 LEMD2Q8NC56 503 aa20.44■□□□□ 0.86
NME3-204ENST00000563498 FBXO18Q8NFZ0 1043 aa20.44■□□□□ 0.86
NME3-204ENST00000563498 IRF7Q92985 503 aa20.44■□□□□ 0.86
NME3-204ENST00000563498 TCEAL4Q96EI5 215 aa20.44■□□□□ 0.86
NME3-204ENST00000563498 SUSD3Q96L08 255 aa20.44■□□□□ 0.86
NME3-204ENST00000563498 DRC1Q96MC2 740 aa20.44■□□□□ 0.86
NME3-204ENST00000563498 ASB16Q96NS5 453 aa20.44■□□□□ 0.86
NME3-204ENST00000563498 TARS2Q9BW92 718 aaKnown RBP20.44■□□□□ 0.86
NME3-204ENST00000563498 RAB34Q9BZG1 259 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms