RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 TRMT2AQ8IZ69 625 aaKnown RBP6.39□□□□□ -1.39
LINC00254-201ENST00000563416 PPM1NQ8N819 430 aa6.39□□□□□ -1.39
LINC00254-201ENST00000563416 ZFP28Q8NHY6 868 aa6.39□□□□□ -1.39
LINC00254-201ENST00000563416 CYFIP2Q96F07 1278 aa6.39□□□□□ -1.39
LINC00254-201ENST00000563416 FUBP3Q96I24 572 aaKnown RBP eCLIP6.39□□□□□ -1.39
LINC00254-201ENST00000563416 FAM193BQ96PV7 902 aaPredicted RBP6.39□□□□□ -1.39
LINC00254-201ENST00000563416 MANSC1Q9H8J5 431 aa6.39□□□□□ -1.39
LINC00254-201ENST00000563416 TMEM140Q9NV12 185 aa6.39□□□□□ -1.39
LINC00254-201ENST00000563416 CEP72Q9P209 647 aa6.39□□□□□ -1.39
LINC00254-201ENST00000563416 TNRQ92752 1358 aa6.39□□□□□ -1.39
LINC00254-201ENST00000563416 NOS1P29475 1434 aa6.39□□□□□ -1.39
LINC00254-201ENST00000563416 ADGRB3O60242 1522 aa6.39□□□□□ -1.39
LINC00254-201ENST00000563416 TMEM131LA2VDJ0 1609 aa6.39□□□□□ -1.39
LINC00254-201ENST00000563416 TBKBP1A7MCY6 615 aa6.38□□□□□ -1.39
LINC00254-201ENST00000563416 PLSCR1O15162 318 aa6.38□□□□□ -1.39
LINC00254-201ENST00000563416 TEX33O43247 280 aa6.38□□□□□ -1.39
LINC00254-201ENST00000563416 FZD7O75084 574 aa6.38□□□□□ -1.39
LINC00254-201ENST00000563416 NDUFS2O75306 463 aa6.38□□□□□ -1.39
LINC00254-201ENST00000563416 PEX11BO96011 259 aa6.38□□□□□ -1.39
LINC00254-201ENST00000563416 SNRPA1P09661 255 aaKnown RBP6.38□□□□□ -1.39
LINC00254-201ENST00000563416 C1SP09871 688 aa6.38□□□□□ -1.39
LINC00254-201ENST00000563416 SREBF1P36956 1147 aa6.38□□□□□ -1.39
LINC00254-201ENST00000563416 TUBA3CQ13748 450 aa6.38□□□□□ -1.39
LINC00254-201ENST00000563416 LSM12Q3MHD2 195 aaKnown RBP6.38□□□□□ -1.39
LINC00254-201ENST00000563416 RABL3Q5HYI8 236 aa6.38□□□□□ -1.39
LINC00254-201ENST00000563416 EFCAB12Q6NXP0 572 aa6.38□□□□□ -1.39
LINC00254-201ENST00000563416 TUBA3EQ6PEY2 450 aa6.38□□□□□ -1.39
LINC00254-201ENST00000563416 DRICH1Q6PGQ1 229 aaPredicted RBP6.38□□□□□ -1.39
LINC00254-201ENST00000563416 MIGA2Q7L4E1 593 aa6.38□□□□□ -1.39
LINC00254-201ENST00000563416 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.38□□□□□ -1.39
LINC00254-201ENST00000563416 CACTINQ8WUQ7 758 aaKnown RBP6.38□□□□□ -1.39
LINC00254-201ENST00000563416 JADE3Q92613 823 aa6.38□□□□□ -1.39
LINC00254-201ENST00000563416 TFAP2CQ92754 450 aa6.38□□□□□ -1.39
LINC00254-201ENST00000563416 HOXB13Q92826 284 aaPredicted RBP6.38□□□□□ -1.39
LINC00254-201ENST00000563416 GPATCH3Q96I76 525 aa6.38□□□□□ -1.39
LINC00254-201ENST00000563416 C7orf25Q9BPX7 421 aa6.38□□□□□ -1.39
LINC00254-201ENST00000563416 CPEB1Q9BZB8 566 aaKnown RBP6.38□□□□□ -1.39
LINC00254-201ENST00000563416 SLIT1O75093 1534 aa6.38□□□□□ -1.39
LINC00254-201ENST00000563416 STRCP1A6NGW2 1772 aa6.37□□□□□ -1.39
LINC00254-201ENST00000563416 IFT172Q9UG01 1749 aa6.37□□□□□ -1.39
LINC00254-201ENST00000563416 CLTCL1P53675 1640 aa6.37□□□□□ -1.39
LINC00254-201ENST00000563416 TRIM24O15164 1050 aa6.37□□□□□ -1.39
LINC00254-201ENST00000563416 TOB2Q14106 344 aaPredicted RBP6.37□□□□□ -1.39
LINC00254-201ENST00000563416 PTPN21Q16825 1174 aa6.37□□□□□ -1.39
LINC00254-201ENST00000563416 BMT2Q1RMZ1 405 aa6.37□□□□□ -1.39
LINC00254-201ENST00000563416 RRP12Q5JTH9 1297 aaKnown RBP6.37□□□□□ -1.39
LINC00254-201ENST00000563416 MFSD14BQ5SR56 506 aa6.37□□□□□ -1.39
LINC00254-201ENST00000563416 GPRIN1Q7Z2K8 1008 aa6.37□□□□□ -1.39
LINC00254-201ENST00000563416 REPS2Q8NFH8 660 aa6.37□□□□□ -1.39
LINC00254-201ENST00000563416 CASKIN2Q8WXE0 1202 aa6.37□□□□□ -1.39
LINC00254-201ENST00000563416 CEP95Q96GE4 821 aa6.37□□□□□ -1.39
LINC00254-201ENST00000563416 DCLRE1CQ96SD1 692 aaKnown RBP6.37□□□□□ -1.39
LINC00254-201ENST00000563416 SMAD5Q99717 465 aaKnown RBP6.37□□□□□ -1.39
LINC00254-201ENST00000563416 SLC13A1Q9BZW2 595 aa6.37□□□□□ -1.39
LINC00254-201ENST00000563416 POGKQ9P215 609 aa6.37□□□□□ -1.39
LINC00254-201ENST00000563416 EIF2B4Q9UI10 523 aaKnown RBP6.37□□□□□ -1.39
LINC00254-201ENST00000563416 TRPM2O94759 1503 aa6.36□□□□□ -1.39
LINC00254-201ENST00000563416 ARHGAP23Q9P227 1491 aa6.36□□□□□ -1.39
LINC00254-201ENST00000563416 PTPRTO14522 1441 aa6.36□□□□□ -1.39
LINC00254-201ENST00000563416 PPFIA4O75335 1185 aa6.36□□□□□ -1.39
LINC00254-201ENST00000563416 RAP2AP10114 183 aa6.36□□□□□ -1.39
LINC00254-201ENST00000563416 WASP42768 502 aa6.36□□□□□ -1.39
LINC00254-201ENST00000563416 GDF5P43026 501 aa6.36□□□□□ -1.39
LINC00254-201ENST00000563416 HSPA2P54652 639 aa6.36□□□□□ -1.39
LINC00254-201ENST00000563416 CLRN1P58418 232 aa6.36□□□□□ -1.39
LINC00254-201ENST00000563416 IGBP1P78318 339 aa6.36□□□□□ -1.39
LINC00254-201ENST00000563416 ANKS6Q68DC2 871 aa6.36□□□□□ -1.39
LINC00254-201ENST00000563416 NRG4Q8WWG1 115 aa6.36□□□□□ -1.39
LINC00254-201ENST00000563416 NDC1Q9BTX1 674 aa6.36□□□□□ -1.39
LINC00254-201ENST00000563416 ASPSCR1Q9BZE9 553 aa6.36□□□□□ -1.39
LINC00254-201ENST00000563416 INTUQ9ULD6 942 aa6.36□□□□□ -1.39
LINC00254-201ENST00000563416 SORCS3Q9UPU3 1222 aa6.36□□□□□ -1.39
LINC00254-201ENST00000563416 XIRP1Q702N8 1843 aaKnown RBP6.36□□□□□ -1.39
LINC00254-201ENST00000563416 PPLO60437 1756 aa6.36□□□□□ -1.39
LINC00254-201ENST00000563416 MED14O60244 1454 aa6.35□□□□□ -1.39
LINC00254-201ENST00000563416 CXorf49A8MYA2 514 aaPredicted RBP6.35□□□□□ -1.39
LINC00254-201ENST00000563416 DIRC3C9JPN6 131 aa6.35□□□□□ -1.39
LINC00254-201ENST00000563416 SCAF4O95104 1147 aaKnown RBP6.35□□□□□ -1.39
LINC00254-201ENST00000563416 ALOX15P16050 662 aaPredicted RBP6.35□□□□□ -1.39
LINC00254-201ENST00000563416 GUCY1A2P33402 732 aa6.35□□□□□ -1.39
LINC00254-201ENST00000563416 PTGS2P35354 604 aa6.35□□□□□ -1.39
LINC00254-201ENST00000563416 EXOSC10Q01780 885 aaKnown RBP6.35□□□□□ -1.39
LINC00254-201ENST00000563416 SEPT2Q15019 361 aa6.35□□□□□ -1.39
LINC00254-201ENST00000563416 PCBP2Q15366 365 aaKnown RBP eCLIP6.35□□□□□ -1.39
LINC00254-201ENST00000563416 ATP2B3Q16720 1220 aa6.35□□□□□ -1.39
LINC00254-201ENST00000563416 BRDTQ58F21 947 aaPredicted RBP6.35□□□□□ -1.39
LINC00254-201ENST00000563416 ATXN7L2Q5T6C5 722 aaPredicted RBP6.35□□□□□ -1.39
LINC00254-201ENST00000563416 DRC7Q8IY82 874 aa6.35□□□□□ -1.39
LINC00254-201ENST00000563416 OR10H5Q8NGA6 315 aa6.35□□□□□ -1.39
LINC00254-201ENST00000563416 CCHCR1Q8TD31 782 aa6.35□□□□□ -1.39
LINC00254-201ENST00000563416 HDAC10Q969S8 669 aa6.35□□□□□ -1.39
LINC00254-201ENST00000563416 TEKT5Q96M29 485 aa6.35□□□□□ -1.39
LINC00254-201ENST00000563416 AJAP1Q9UKB5 411 aaPredicted RBP6.35□□□□□ -1.39
LINC00254-201ENST00000563416 LTBP4Q8N2S1 1624 aa6.35□□□□□ -1.39
LINC00254-201ENST00000563416 CHD2O14647 1828 aaKnown RBP6.34□□□□□ -1.39
LINC00254-201ENST00000563416 TNKSO95271 1327 aa6.34□□□□□ -1.39
LINC00254-201ENST00000563416 NPIPB8E9PQR5 432 aa6.34□□□□□ -1.39
LINC00254-201ENST00000563416 FZD9O00144 591 aa6.34□□□□□ -1.39
LINC00254-201ENST00000563416 PCDHGA12O60330 932 aa6.34□□□□□ -1.39
LINC00254-201ENST00000563416 FAM20BO75063 409 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms