RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ELOA2Q8IYF1 753 aaPredicted RBP9.29□□□□□ -0.92
UBR1-204ENST00000563239 SPATA20Q8TB22 786 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 SLC22A17Q8WUG5 538 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 ERCC4Q92889 916 aaPredicted RBP9.29□□□□□ -0.92
UBR1-204ENST00000563239 KIF12Q96FN5 646 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 FAM84AQ96KN4 292 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 FBXL18Q96ME1 805 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 UROC1Q96N76 676 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 KCTD10Q9H3F6 313 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 TLE6Q9H808 572 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 RXFP1Q9HBX9 757 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 SLC38A7Q9NVC3 462 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 CLEC1BQ9P126 229 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 THEGQ9P2T0 379 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 COG5Q9UP83 839 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 ANK1P16157 1881 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 CITO14578 2027 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.28□□□□□ -0.92
UBR1-204ENST00000563239 I3L4J1 428 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 CLIC2O15247 247 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 NCK2O43639 380 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 PRPF40AO75400 957 aaKnown RBP9.28□□□□□ -0.92
UBR1-204ENST00000563239 B3GAT3O94766 335 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 CNPP09543 421 aaKnown RBP9.28□□□□□ -0.92
UBR1-204ENST00000563239 CYP3A5P20815 502 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 FGFR3P22607 806 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 RPL9P32969 192 aaKnown RBP9.28□□□□□ -0.92
UBR1-204ENST00000563239 BRCC3P46736 316 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 SNRPFP62306 86 aaKnown RBP9.28□□□□□ -0.92
UBR1-204ENST00000563239 ARMCX5Q6P1M9 558 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 TMEM184AQ6ZMB5 413 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 CBWD2Q8IUF1 395 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 BRSK2Q8IWQ3 736 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 CD302Q8IX05 232 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 C12orf56Q8IXR9 622 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 GPR65Q8IYL9 337 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 GPD1LQ8N335 351 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.28□□□□□ -0.92
UBR1-204ENST00000563239 CXorf38Q8TB03 319 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 LNX1Q8TBB1 728 aaPredicted RBP9.28□□□□□ -0.92
UBR1-204ENST00000563239 TMEM174Q8WUU8 243 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 ATXN2LQ8WWM7 1075 aaKnown RBP9.28□□□□□ -0.92
UBR1-204ENST00000563239 FAM212AQ96EL1 285 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 DDX27Q96GQ7 796 aaKnown RBP9.28□□□□□ -0.92
UBR1-204ENST00000563239 MSLNLQ96KJ4 702 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 KLHL5Q96PQ7 755 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 TSPAN18Q96SJ8 248 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 CDCA3Q99618 268 aaPredicted RBP9.28□□□□□ -0.92
UBR1-204ENST00000563239 GZF1Q9H116 711 aaPredicted RBP9.28□□□□□ -0.92
UBR1-204ENST00000563239 ASB7Q9H672 318 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 DMAC2Q9NW81 257 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 CLDND1Q9NY35 253 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 HSPBP1Q9NZL4 362 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 STK39Q9UEW8 545 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 UBQLN1Q9UMX0 589 aaKnown RBP9.28□□□□□ -0.92
UBR1-204ENST00000563239 DERAQ9Y315 318 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 C2CD2Q9Y426 696 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 PCDHA5Q9Y5H7 936 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 SF3B1O75533 1304 aaKnown RBP eCLIP9.28□□□□□ -0.923e-6■■■■■ 137.9
UBR1-204ENST00000563239 PTPRJQ12913 1337 aa9.28□□□□□ -0.92
UBR1-204ENST00000563239 ANO9A1A5B4 782 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 H3BQ06 376 aaPredicted RBP9.27□□□□□ -0.93
UBR1-204ENST00000563239 PIRO00625 290 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 C2CD2LO14523 706 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 KIAA0391O15091 583 aaKnown RBP9.27□□□□□ -0.93
UBR1-204ENST00000563239 SPTLC1O15269 473 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 TEX28O15482 410 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 IL18RAPO95256 599 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 LDHAP00338 332 aaKnown RBP9.27□□□□□ -0.93
UBR1-204ENST00000563239 URODP06132 367 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 BMP1P13497 986 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 KCNA5P22460 613 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 TKTP29401 623 aaKnown RBP9.27□□□□□ -0.93
UBR1-204ENST00000563239 GLUD2P49448 558 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 AARSP49588 968 aaKnown RBP eCLIP9.27□□□□□ -0.93
UBR1-204ENST00000563239 KCNQ1P51787 676 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 UBE2HP62256 183 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 TMEM132DQ14C87 1099 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 USP41Q3LFD5 358 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 LEXMQ3ZCV2 418 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 FAM171A1Q5VUB5 890 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 PRSS55Q6UWB4 352 aaPredicted RBP9.27□□□□□ -0.93
UBR1-204ENST00000563239 RSPO2Q6UXX9 243 aaPredicted RBP9.27□□□□□ -0.93
UBR1-204ENST00000563239 SMYD4Q8IYR2 804 aaPredicted RBP9.27□□□□□ -0.93
UBR1-204ENST00000563239 FEZF2Q8TBJ5 459 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 RIN2Q8WYP3 895 aaPredicted RBP9.27□□□□□ -0.93
UBR1-204ENST00000563239 ASB2Q96Q27 587 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 PDE11AQ9HCR9 933 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 MRPL17Q9NRX2 175 aaKnown RBP9.27□□□□□ -0.93
UBR1-204ENST00000563239 RBAKQ9NYW8 714 aaPredicted RBP9.27□□□□□ -0.93
UBR1-204ENST00000563239 BARX2Q9UMQ3 279 aaPredicted RBP9.27□□□□□ -0.93
UBR1-204ENST00000563239 MAPK8IP1Q9UQF2 711 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 HCFC2Q9Y5Z7 792 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 VWA8A3KMH1 1905 aa9.27□□□□□ -0.93
UBR1-204ENST00000563239 PDXKO00764 312 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 ADAM12O43184 909 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 TBC1D4O60343 1298 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 EPCAMP16422 314 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 RPL17P18621 184 aaKnown RBP9.26□□□□□ -0.93
UBR1-204ENST00000563239 BMP6P22004 513 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms