RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 RNF180Q86T96 592 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 SERINC5Q86VE9 423 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 SLC47A2Q86VL8 602 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 ZNF710Q8N1W2 664 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 SLAIN1Q8ND83 568 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 FAM81BQ96LP2 452 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 ASB7Q9H672 318 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 TNNC2P02585 160 aa19.4■□□□□ 0.7
COMMD4-208ENST00000563220 ACO1P21399 889 aaKnown RBP19.4■□□□□ 0.7
COMMD4-208ENST00000563220 TNFAIP3P21580 790 aa19.4■□□□□ 0.7
COMMD4-208ENST00000563220 AXLP30530 894 aa19.4■□□□□ 0.7
COMMD4-208ENST00000563220 GRK4P32298 578 aa19.4■□□□□ 0.7
COMMD4-208ENST00000563220 MRPS6P82932 125 aaKnown RBP19.4■□□□□ 0.7
COMMD4-208ENST00000563220 RBM10P98175 930 aaKnown RBP19.4■□□□□ 0.7
COMMD4-208ENST00000563220 CUL2Q13617 745 aa19.4■□□□□ 0.7
COMMD4-208ENST00000563220 C10orf76Q5T2E6 689 aa19.4■□□□□ 0.7
COMMD4-208ENST00000563220 NOP9Q86U38 636 aaKnown RBP19.4■□□□□ 0.7
COMMD4-208ENST00000563220 PALB2Q86YC2 1186 aa19.4■□□□□ 0.7
COMMD4-208ENST00000563220 EPS8L1Q8TE68 723 aa19.4■□□□□ 0.7
COMMD4-208ENST00000563220 CXCL16Q9H2A7 254 aa19.4■□□□□ 0.7
COMMD4-208ENST00000563220 SNTG2Q9NY99 539 aa19.4■□□□□ 0.7
COMMD4-208ENST00000563220 NOCTQ9UK39 431 aaKnown RBP19.4■□□□□ 0.7
COMMD4-208ENST00000563220 PTCH2Q9Y6C5 1203 aa19.4■□□□□ 0.7
COMMD4-208ENST00000563220 CDY2AQ9Y6F7 541 aa19.4■□□□□ 0.7
COMMD4-208ENST00000563220 THSD7BQ9C0I4 1608 aa19.39■□□□□ 0.7
COMMD4-208ENST00000563220 URI1O94763 535 aaPredicted RBP19.39■□□□□ 0.7
COMMD4-208ENST00000563220 CHRNB2P17787 502 aa19.39■□□□□ 0.7
COMMD4-208ENST00000563220 ACLYP53396 1101 aa19.39■□□□□ 0.7
COMMD4-208ENST00000563220 TRPC3Q13507 836 aa19.39■□□□□ 0.7
COMMD4-208ENST00000563220 RPUSD2Q8IZ73 545 aaKnown RBP19.39■□□□□ 0.7
COMMD4-208ENST00000563220 C1orf127Q8N9H9 656 aa19.39■□□□□ 0.7
COMMD4-208ENST00000563220 SECISBP2LQ93073 1101 aaKnown RBP19.39■□□□□ 0.7
COMMD4-208ENST00000563220 L2HGDHQ9H9P8 463 aa19.39■□□□□ 0.7
COMMD4-208ENST00000563220 HMX1Q9NP08 348 aaPredicted RBP19.39■□□□□ 0.7
COMMD4-208ENST00000563220 LUC7LQ9NQ29 371 aaKnown RBP19.39■□□□□ 0.7
COMMD4-208ENST00000563220 SIX4Q9UIU6 781 aa19.39■□□□□ 0.7
COMMD4-208ENST00000563220 PIN4Q9Y237 131 aaKnown RBP19.39■□□□□ 0.7
COMMD4-208ENST00000563220 NOC2LQ9Y3T9 749 aaKnown RBP19.39■□□□□ 0.7
COMMD4-208ENST00000563220 HES2Q9Y543 173 aa19.39■□□□□ 0.7
COMMD4-208ENST00000563220 KRT5P13647 590 aa19.39■□□□□ 0.69
COMMD4-208ENST00000563220 CYP11B1P15538 503 aa19.39■□□□□ 0.69
COMMD4-208ENST00000563220 PRMT2P55345 433 aa19.39■□□□□ 0.69
COMMD4-208ENST00000563220 SGSM1Q2NKQ1 1148 aa19.39■□□□□ 0.69
COMMD4-208ENST00000563220 FAM228AQ86W67 206 aa19.39■□□□□ 0.69
COMMD4-208ENST00000563220 TXLNBQ8N3L3 684 aa19.39■□□□□ 0.69
COMMD4-208ENST00000563220 CXorf38Q8TB03 319 aa19.39■□□□□ 0.69
COMMD4-208ENST00000563220 XYLT2Q9H1B5 865 aa19.39■□□□□ 0.69
COMMD4-208ENST00000563220 TAS2R14Q9NYV8 317 aa19.39■□□□□ 0.69
COMMD4-208ENST00000563220 TRIM17Q9Y577 477 aa19.39■□□□□ 0.69
COMMD4-208ENST00000563220 MOCS3O95396 460 aa19.38■□□□□ 0.69
COMMD4-208ENST00000563220 CALCAP01258 141 aa19.38■□□□□ 0.69
COMMD4-208ENST00000563220 CHRNA1P02708 482 aa19.38■□□□□ 0.69
COMMD4-208ENST00000563220 ITGA7Q13683 1181 aa19.38■□□□□ 0.69
COMMD4-208ENST00000563220 PTGISQ16647 500 aa19.38■□□□□ 0.69
COMMD4-208ENST00000563220 UBXN11Q5T124 520 aa19.38■□□□□ 0.69
COMMD4-208ENST00000563220 TAF3Q5VWG9 929 aa19.38■□□□□ 0.69
COMMD4-208ENST00000563220 RSPH3Q86UC2 560 aa19.38■□□□□ 0.69
COMMD4-208ENST00000563220 PCDHB18PQ96TA0 734 aa19.38■□□□□ 0.69
COMMD4-208ENST00000563220 CCDC94Q9BW85 323 aaPredicted RBP19.38■□□□□ 0.69
COMMD4-208ENST00000563220 IMPG2Q9BZV3 1241 aa19.38■□□□□ 0.69
COMMD4-208ENST00000563220 TRPV2Q9Y5S1 764 aa19.38■□□□□ 0.69
COMMD4-208ENST00000563220 TMCO5BA8MYB1 307 aa19.37■□□□□ 0.69
COMMD4-208ENST00000563220 CTSHP09668 335 aa19.37■□□□□ 0.69
COMMD4-208ENST00000563220 TBXAS1P24557 533 aaPredicted RBP19.37■□□□□ 0.69
COMMD4-208ENST00000563220 APBB1IPQ7Z5R6 666 aaPredicted RBP19.37■□□□□ 0.69
COMMD4-208ENST00000563220 RPAINQ86UA6 219 aa19.37■□□□□ 0.69
COMMD4-208ENST00000563220 DDX1Q92499 740 aaKnown RBP19.37■□□□□ 0.69
COMMD4-208ENST00000563220 SEPT11Q9NVA2 429 aaKnown RBP19.37■□□□□ 0.69
COMMD4-208ENST00000563220 CAPN6Q9Y6Q1 641 aa19.37■□□□□ 0.69
COMMD4-208ENST00000563220 DNAH12Q6ZR08 3092 aa19.37■□□□□ 0.69
COMMD4-208ENST00000563220 CTAGE9A4FU28 777 aa19.37■□□□□ 0.69
COMMD4-208ENST00000563220 M0QZ92 97 aa19.37■□□□□ 0.69
COMMD4-208ENST00000563220 CTIFO43310 598 aaKnown RBP19.37■□□□□ 0.69
COMMD4-208ENST00000563220 BUB1O43683 1085 aa19.37■□□□□ 0.69
COMMD4-208ENST00000563220 CABYRO75952 493 aa19.37■□□□□ 0.69
COMMD4-208ENST00000563220 CLSTN1O94985 981 aa19.37■□□□□ 0.69
COMMD4-208ENST00000563220 MMEP08473 750 aa19.37■□□□□ 0.69
COMMD4-208ENST00000563220 KRT19P08727 400 aa19.37■□□□□ 0.69
COMMD4-208ENST00000563220 GUCY2FP51841 1108 aa19.37■□□□□ 0.69
COMMD4-208ENST00000563220 FMO1Q01740 532 aa19.37■□□□□ 0.69
COMMD4-208ENST00000563220 MGAT3Q09327 533 aa19.37■□□□□ 0.69
COMMD4-208ENST00000563220 TMEM132DQ14C87 1099 aa19.37■□□□□ 0.69
COMMD4-208ENST00000563220 NAPGQ99747 312 aaPredicted RBP19.37■□□□□ 0.69
COMMD4-208ENST00000563220 SENP6Q9GZR1 1112 aaPredicted RBP19.37■□□□□ 0.69
COMMD4-208ENST00000563220 NXF3Q9H4D5 531 aaKnown RBP19.37■□□□□ 0.69
COMMD4-208ENST00000563220 C2CD2Q9Y426 696 aa19.37■□□□□ 0.69
COMMD4-208ENST00000563220 FAM170AA1A519 330 aa19.36■□□□□ 0.69
COMMD4-208ENST00000563220 H2AFZP0C0S5 128 aa19.36■□□□□ 0.69
COMMD4-208ENST00000563220 GALCP54803 685 aa19.36■□□□□ 0.69
COMMD4-208ENST00000563220 ZNF699Q32M78 642 aa19.36■□□□□ 0.69
COMMD4-208ENST00000563220 H2AFVQ71UI9 128 aa19.36■□□□□ 0.69
COMMD4-208ENST00000563220 CD302Q8IX05 232 aa19.36■□□□□ 0.69
COMMD4-208ENST00000563220 RNF10Q8N5U6 811 aaKnown RBP19.36■□□□□ 0.69
COMMD4-208ENST00000563220 UBR7Q8N806 425 aa19.36■□□□□ 0.69
COMMD4-208ENST00000563220 SH3TC2Q8TF17 1288 aa19.36■□□□□ 0.69
COMMD4-208ENST00000563220 ZMAT2Q96NC0 199 aaKnown RBP19.36■□□□□ 0.69
COMMD4-208ENST00000563220 OSBPL7Q9BZF2 842 aa19.36■□□□□ 0.69
COMMD4-208ENST00000563220 TRIM6Q9C030 488 aaPredicted RBP19.36■□□□□ 0.69
COMMD4-208ENST00000563220 PLEKHA5Q9HAU0 1116 aa19.36■□□□□ 0.69
COMMD4-208ENST00000563220 TRMT13Q9NUP7 481 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms