RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 CREBRFQ8IUR6 639 aa20.35■□□□□ 0.85
RAB40C-207ENST00000563109 CNOT6LQ96LI5 555 aaKnown RBP20.35■□□□□ 0.85
RAB40C-207ENST00000563109 COLEC11Q9BWP8 271 aa20.35■□□□□ 0.85
RAB40C-207ENST00000563109 TSPY26PQ9H489 355 aa20.35■□□□□ 0.85
RAB40C-207ENST00000563109 GOLGA2P5Q9HBQ8 144 aa20.35■□□□□ 0.85
RAB40C-207ENST00000563109 DPP3Q9NY33 737 aa20.35■□□□□ 0.85
RAB40C-207ENST00000563109 FAN1Q9Y2M0 1017 aa20.35■□□□□ 0.85
RAB40C-207ENST00000563109 PRG3Q9Y2Y8 225 aaPredicted RBP20.35■□□□□ 0.85
RAB40C-207ENST00000563109 BECN2A8MW95 431 aa20.34■□□□□ 0.85
RAB40C-207ENST00000563109 PODXLO00592 558 aa20.34■□□□□ 0.85
RAB40C-207ENST00000563109 B4GALT3O60512 393 aa20.34■□□□□ 0.85
RAB40C-207ENST00000563109 GALTP07902 379 aa20.34■□□□□ 0.85
RAB40C-207ENST00000563109 TRIM49P0CI25 452 aa20.34■□□□□ 0.85
RAB40C-207ENST00000563109 TRIM49CP0CI26 452 aa20.34■□□□□ 0.85
RAB40C-207ENST00000563109 SOX4Q06945 474 aaPredicted RBP20.34■□□□□ 0.85
RAB40C-207ENST00000563109 PLEKHO2Q8TD55 490 aa20.34■□□□□ 0.85
RAB40C-207ENST00000563109 ANP32EQ9BTT0 268 aa20.34■□□□□ 0.85
RAB40C-207ENST00000563109 PLVAPQ9BX97 442 aa20.34■□□□□ 0.85
RAB40C-207ENST00000563109 ITGA11Q9UKX5 1188 aa20.34■□□□□ 0.85
RAB40C-207ENST00000563109 MTUS1Q9ULD2 1270 aa20.34■□□□□ 0.85
RAB40C-207ENST00000563109 PTPRJQ12913 1337 aa20.33■□□□□ 0.85
RAB40C-207ENST00000563109 TMEM265A0A087WTH1 108 aa20.33■□□□□ 0.85
RAB40C-207ENST00000563109 NRP1O14786 923 aa20.33■□□□□ 0.85
RAB40C-207ENST00000563109 IKBKBO14920 756 aa20.33■□□□□ 0.85
RAB40C-207ENST00000563109 ARHGEF15O94989 841 aa20.33■□□□□ 0.85
RAB40C-207ENST00000563109 LRPAP1P30533 357 aa20.33■□□□□ 0.85
RAB40C-207ENST00000563109 BMPR1AP36894 532 aa20.33■□□□□ 0.85
RAB40C-207ENST00000563109 PBX3P40426 434 aa20.33■□□□□ 0.85
RAB40C-207ENST00000563109 MTIF2P46199 727 aaKnown RBP20.33■□□□□ 0.85
RAB40C-207ENST00000563109 CLCNKBP51801 687 aa20.33■□□□□ 0.85
RAB40C-207ENST00000563109 GUCY2FP51841 1108 aa20.33■□□□□ 0.85
RAB40C-207ENST00000563109 MARSP56192 900 aaKnown RBP20.33■□□□□ 0.85
RAB40C-207ENST00000563109 ZNF445P59923 1031 aa20.33■□□□□ 0.85
RAB40C-207ENST00000563109 ERVK-21P61565 698 aa20.33■□□□□ 0.85
RAB40C-207ENST00000563109 DLG4P78352 724 aa20.33■□□□□ 0.85
RAB40C-207ENST00000563109 CLDN10P78369 228 aa20.33■□□□□ 0.85
RAB40C-207ENST00000563109 BIRC3Q13489 604 aa20.33■□□□□ 0.85
RAB40C-207ENST00000563109 BORCS6Q96GS4 357 aa20.33■□□□□ 0.85
RAB40C-207ENST00000563109 POP1Q99575 1024 aaKnown RBP20.33■□□□□ 0.85
RAB40C-207ENST00000563109 C17orf80Q9BSJ5 609 aa20.33■□□□□ 0.85
RAB40C-207ENST00000563109 SPG21Q9NZD8 308 aa20.33■□□□□ 0.85
RAB40C-207ENST00000563109 PHACTR2O75167 634 aa20.32■□□□□ 0.84
RAB40C-207ENST00000563109 ITGB3P05106 788 aa20.32■□□□□ 0.84
RAB40C-207ENST00000563109 RB1P06400 928 aa20.32■□□□□ 0.84
RAB40C-207ENST00000563109 KRT19P08727 400 aa20.32■□□□□ 0.84
RAB40C-207ENST00000563109 LINC00271P0C7V0 271 aa20.32■□□□□ 0.84
RAB40C-207ENST00000563109 GTF2H1P32780 548 aa20.32■□□□□ 0.84
RAB40C-207ENST00000563109 TPM4P67936 248 aa20.32■□□□□ 0.84
RAB40C-207ENST00000563109 UPP1Q16831 310 aa20.32■□□□□ 0.84
RAB40C-207ENST00000563109 EPC2Q52LR7 807 aa20.32■□□□□ 0.84
RAB40C-207ENST00000563109 SLC39A11Q8N1S5 342 aa20.32■□□□□ 0.84
RAB40C-207ENST00000563109 FBXO22Q8NEZ5 403 aa20.32■□□□□ 0.84
RAB40C-207ENST00000563109 OR5B17Q8NGF7 314 aa20.32■□□□□ 0.84
RAB40C-207ENST00000563109 TMEM169Q96HH4 297 aa20.32■□□□□ 0.84
RAB40C-207ENST00000563109 ZNF560Q96MR9 790 aa20.32■□□□□ 0.84
RAB40C-207ENST00000563109 C11orf84Q9BUA3 381 aaPredicted RBP20.32■□□□□ 0.84
RAB40C-207ENST00000563109 MMRN2Q9H8L6 949 aa20.32■□□□□ 0.84
RAB40C-207ENST00000563109 CACNG4Q9UBN1 327 aa20.32■□□□□ 0.84
RAB40C-207ENST00000563109 KCNJ18B7U540 433 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 NT5C1B-RDH14C9J2C7 533 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 TMEM189-UBE2V1I3L0A0 370 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 TADA2AO75478 443 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 B3GAT3O94766 335 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 KIF4AO95239 1232 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 EEF1GP26641 437 aaKnown RBP20.31■□□□□ 0.84
RAB40C-207ENST00000563109 KRT17Q04695 432 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 TRPC3Q13507 836 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 KCNJ12Q14500 433 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 HSP90AA4PQ58FG1 418 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 C9orf57Q5W0N0 161 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 DCLRE1AQ6PJP8 1040 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 TRAPPC11Q7Z392 1133 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 TRIM59Q8IWR1 403 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 C1orf127Q8N9H9 656 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 ANKRD20A12PQ8NF67 263 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 FAM200AQ8TCP9 573 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 ARNTL2Q8WYA1 636 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 RABGGTAQ92696 567 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 PAAF1Q9BRP4 392 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 TMEM8AQ9HCN3 771 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 SAMSN1Q9NSI8 373 aaKnown RBP20.31■□□□□ 0.84
RAB40C-207ENST00000563109 NUB1Q9Y5A7 615 aa20.31■□□□□ 0.84
RAB40C-207ENST00000563109 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.31■□□□□ 0.84
RAB40C-207ENST00000563109 COL4A4P53420 1690 aaPredicted RBP20.31■□□□□ 0.84
RAB40C-207ENST00000563109 C5orf67F2Z3F1 127 aa20.3■□□□□ 0.84
RAB40C-207ENST00000563109 N4BP1O75113 896 aaKnown RBP20.3■□□□□ 0.84
RAB40C-207ENST00000563109 CLSTN1O94985 981 aa20.3■□□□□ 0.84
RAB40C-207ENST00000563109 TPM2P07951 284 aa20.3■□□□□ 0.84
RAB40C-207ENST00000563109 POLR2BP30876 1174 aaKnown RBP20.3■□□□□ 0.84
RAB40C-207ENST00000563109 PNPLA4P41247 253 aa20.3■□□□□ 0.84
RAB40C-207ENST00000563109 GCLMP48507 274 aa20.3■□□□□ 0.84
RAB40C-207ENST00000563109 MXI1P50539 228 aa20.3■□□□□ 0.84
RAB40C-207ENST00000563109 RBP5P82980 135 aa20.3■□□□□ 0.84
RAB40C-207ENST00000563109 HABP4Q5JVS0 413 aaKnown RBP20.3■□□□□ 0.84
RAB40C-207ENST00000563109 DHX40Q8IX18 779 aaKnown RBP20.3■□□□□ 0.84
RAB40C-207ENST00000563109 SLC35C1Q96A29 364 aa20.3■□□□□ 0.84
RAB40C-207ENST00000563109 IGSF21Q96ID5 467 aa20.3■□□□□ 0.84
RAB40C-207ENST00000563109 FAM84AQ96KN4 292 aa20.3■□□□□ 0.84
RAB40C-207ENST00000563109 ZNF576Q9H609 170 aa20.3■□□□□ 0.84
RAB40C-207ENST00000563109 CERS4Q9HA82 394 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms