RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CCDC60Q8IWA6 550 aaPredicted RBP8.01□□□□□ -1.13
TCF4-216ENST00000562680 BRSK2Q8IWQ3 736 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 C18orf8Q96DM3 657 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 SGSM3Q96HU1 749 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 NUP85Q9BW27 656 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 ZNF518BQ9C0D4 1074 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 KDM4CQ9H3R0 1056 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 DCDC2CA8MYV0 355 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 GZMAP12544 262 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 SP3Q02447 781 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 NFIL3Q16649 462 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 FSCN1Q16658 493 aaKnown RBP8.01□□□□□ -1.13
TCF4-216ENST00000562680 TREML2Q5T2D2 321 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 KCTD6Q8NC69 237 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 CLEC4DQ8WXI8 215 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 KRT12Q99456 494 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 CBWD1Q9BRT8 395 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 MMTAG2Q9BU76 263 aaKnown RBP8.01□□□□□ -1.13
TCF4-216ENST00000562680 PDE11AQ9HCR9 933 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 BTBD19C9JJ37 291 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 AKAP3O75969 853 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 SLURP2P0DP57 97 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 COG7P83436 770 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 ITIH3Q06033 890 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 CUL2Q13617 745 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 PSMD6Q15008 389 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 NPY5RQ15761 445 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 DUSP28Q4G0W2 176 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 ZNF394Q53GI3 561 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 KCNK18Q7Z418 384 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 CBWD2Q8IUF1 395 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 DCP1BQ8IZD4 617 aaKnown RBP8.01□□□□□ -1.13
TCF4-216ENST00000562680 USP6NLQ92738 828 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 ZNF668Q96K58 619 aaPredicted RBP8.01□□□□□ -1.13
TCF4-216ENST00000562680 NGRNQ9NPE2 291 aaKnown RBP8.01□□□□□ -1.13
TCF4-216ENST00000562680 RGS17Q9UGC6 210 aaPredicted RBP8.01□□□□□ -1.13
TCF4-216ENST00000562680 GTF3C4Q9UKN8 822 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 ZNF214Q9UL59 606 aaPredicted RBP8.01□□□□□ -1.13
TCF4-216ENST00000562680 SNX9Q9Y5X1 595 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 HEXIM1O94992 359 aaKnown RBP8.01□□□□□ -1.13
TCF4-216ENST00000562680 NPTXRO95502 500 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 ACTN1P12814 892 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 TAL1P17542 331 aaPredicted RBP8.01□□□□□ -1.13
TCF4-216ENST00000562680 PON1P27169 355 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 CAV1Q03135 178 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 TTC19Q6DKK2 380 aaPredicted RBP8.01□□□□□ -1.13
TCF4-216ENST00000562680 ZNF467Q7Z7K2 595 aaPredicted RBP8.01□□□□□ -1.13
TCF4-216ENST00000562680 IL31RAQ8NI17 732 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.01□□□□□ -1.13
TCF4-216ENST00000562680 DUSP9Q99956 384 aaKnown RBP8.01□□□□□ -1.13
TCF4-216ENST00000562680 ZBED2Q9BTP6 218 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 ST6GALNAC4Q9H4F1 302 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 SLITRK6Q9H5Y7 841 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 HMX1Q9NP08 348 aaPredicted RBP8.01□□□□□ -1.13
TCF4-216ENST00000562680 AGPAT5Q9NUQ2 364 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 MYH2Q9UKX2 1941 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 PFDN6O15212 129 aa8□□□□□ -1.13
TCF4-216ENST00000562680 SPATA31C1P0DKV0 1188 aa8□□□□□ -1.13
TCF4-216ENST00000562680 SLC8A1P32418 973 aa8□□□□□ -1.13
TCF4-216ENST00000562680 CYP2C19P33261 490 aa8□□□□□ -1.13
TCF4-216ENST00000562680 NFRKBQ6P4R8 1299 aa8□□□□□ -1.13
TCF4-216ENST00000562680 EMBQ6PCB8 327 aa8□□□□□ -1.13
TCF4-216ENST00000562680 TADA2BQ86TJ2 420 aa8□□□□□ -1.13
TCF4-216ENST00000562680 HPDLQ96IR7 371 aa8□□□□□ -1.13
TCF4-216ENST00000562680 SEZ6LQ9BYH1 1024 aa8□□□□□ -1.13
TCF4-216ENST00000562680 XPNPEP3Q9NQH7 507 aa8□□□□□ -1.13
TCF4-216ENST00000562680 DYTNA2CJ06 578 aa8□□□□□ -1.13
TCF4-216ENST00000562680 CTSHP09668 335 aa8□□□□□ -1.13
TCF4-216ENST00000562680 GCNT1Q02742 428 aa8□□□□□ -1.13
TCF4-216ENST00000562680 HHATQ5VTY9 493 aa8□□□□□ -1.13
TCF4-216ENST00000562680 NAIF1Q69YI7 327 aaPredicted RBP8□□□□□ -1.13
TCF4-216ENST00000562680 CCDC80Q76M96 950 aa8□□□□□ -1.13
TCF4-216ENST00000562680 MICAL1Q8TDZ2 1067 aa8□□□□□ -1.13
TCF4-216ENST00000562680 MED15Q96RN5 788 aa8□□□□□ -1.13
TCF4-216ENST00000562680 SELENOSQ9BQE4 189 aa8□□□□□ -1.13
TCF4-216ENST00000562680 KIFC3Q9BVG8 833 aa8□□□□□ -1.13
TCF4-216ENST00000562680 UBAP1Q9NZ09 502 aa8□□□□□ -1.13
TCF4-216ENST00000562680 ITGA11Q9UKX5 1188 aa8□□□□□ -1.13
TCF4-216ENST00000562680 PHF20L1A8MW92 1017 aa8□□□□□ -1.13
TCF4-216ENST00000562680 SNUPNO95149 360 aaKnown RBP8□□□□□ -1.13
TCF4-216ENST00000562680 GUCY2DQ02846 1103 aa8□□□□□ -1.13
TCF4-216ENST00000562680 KRT71Q3SY84 523 aa8□□□□□ -1.13
TCF4-216ENST00000562680 SLC27A1Q6PCB7 646 aa8□□□□□ -1.13
TCF4-216ENST00000562680 SEPT8Q92599 483 aa8□□□□□ -1.13
TCF4-216ENST00000562680 CALN1Q9BXU9 219 aa8□□□□□ -1.13
TCF4-216ENST00000562680 VPS18Q9P253 973 aa8□□□□□ -1.13
TCF4-216ENST00000562680 PAIP2BQ9ULR5 123 aaKnown RBP8□□□□□ -1.13
TCF4-216ENST00000562680 IGLV3-22A0A075B6J6 115 aa8□□□□□ -1.13
TCF4-216ENST00000562680 FAM187AA6NFU0 413 aa8□□□□□ -1.13
TCF4-216ENST00000562680 ABL1P00519 1130 aa8□□□□□ -1.13
TCF4-216ENST00000562680 TPP2P29144 1249 aaPredicted RBP8□□□□□ -1.13
TCF4-216ENST00000562680 CHRNA3P32297 505 aa8□□□□□ -1.13
TCF4-216ENST00000562680 GALCP54803 685 aa8□□□□□ -1.13
TCF4-216ENST00000562680 PIGHQ14442 188 aaPredicted RBP8□□□□□ -1.13
TCF4-216ENST00000562680 VEPH1Q14D04 833 aa8□□□□□ -1.13
TCF4-216ENST00000562680 E4F1Q66K89 784 aaPredicted RBP8□□□□□ -1.13
TCF4-216ENST00000562680 MOB2Q70IA6 237 aa8□□□□□ -1.13
TCF4-216ENST00000562680 B4GALNT4Q76KP1 1039 aa8□□□□□ -1.13
TCF4-216ENST00000562680 ANKS4BQ8N8V4 417 aa8□□□□□ -1.13
TCF4-216ENST00000562680 PPTC7Q8NI37 304 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms