RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 RIPOR3Q96MK2 946 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 UROC1Q96N76 676 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 ZNF396Q96N95 335 aaPredicted RBP12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 NECTIN4Q96NY8 510 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 ST6GALNAC4Q9H4F1 302 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 DAXXQ9UER7 740 aaPredicted RBP12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 WDFY4Q6ZS81 3184 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 KMT2EQ8IZD2 1858 aa12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 OGTO15294 1046 aa12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 PAPLNO95428 1278 aa12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 ASGR2P07307 311 aa12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 ADRB2P07550 413 aa12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 HSP90AA1P07900 732 aaKnown RBP12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 CLTAP09496 248 aa12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 OR1D2P34982 312 aa12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 TXLNAP40222 546 aa12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 ACOT2P49753 483 aa12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 WNT7BP56706 349 aa12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 ZXDAP98168 799 aa12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 CRELD2Q6UXH1 353 aaPredicted RBP12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 C15orf39Q6ZRI6 1047 aa12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 KREMEN2Q8NCW0 462 aa12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 CMASQ8NFW8 434 aaPredicted RBP12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 EDAQ92838 391 aa12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 MTRRQ9UBK8 725 aa12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 FBXW11Q9UKB1 542 aa12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 CPSF3Q9UKF6 684 aaKnown RBP12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 PCDHA7Q9UN72 937 aa12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 STYXL1Q9Y6J8 313 aa12.09□□□□□ -0.47
LPCAT4-202ENST00000562404 SPDYE4A6NLX3 237 aa12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 PRR33A8MZF0 331 aa12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 TBC1D4O60343 1298 aa12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 CUTAO60888 179 aa12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 IDEP14735 1019 aa12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 CASP1P29466 404 aa12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 ELAVL2Q12926 359 aaKnown RBP12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 VARS2Q5ST30 1063 aaKnown RBP12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 SCARA3Q6AZY7 606 aa12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 HFE2Q6ZVN8 426 aa12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 DHX58Q96C10 678 aa12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 KIF12Q96FN5 646 aa12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 MSTO1Q9BUK6 570 aa12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 MRPL44Q9H9J2 332 aaKnown RBP12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 PLEKHA5Q9HAU0 1116 aa12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 SLC38A7Q9NVC3 462 aa12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 KBTBD4Q9NVX7 518 aa12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 LIMD1Q9UGP4 676 aa12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 CDY1Q9Y6F8 540 aa12.08□□□□□ -0.48
LPCAT4-202ENST00000562404 ZMYND10O75800 440 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 PRPF6O94906 941 aaKnown RBP12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 GCNT3O95395 438 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 NFICP08651 508 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 LRPAP1P30533 357 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 RPL9P32969 192 aaKnown RBP12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 NTHL1P78549 312 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 RAB33AQ14088 237 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 MRPL58Q14197 206 aaKnown RBP12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 PTPN21Q16825 1174 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 JADE1Q6IE81 842 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 HDAC7Q8WUI4 952 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 SMG7Q92540 1137 aaKnown RBP12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 FAM212AQ96EL1 285 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 ASIC4Q96FT7 647 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 FAM84AQ96KN4 292 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 SUSD3Q96L08 255 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 MYADMQ96S97 322 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 PRKD2Q9BZL6 878 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 TRIM9Q9C026 710 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 PLEKHA4Q9H4M7 779 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 RPF1Q9H9Y2 349 aaKnown RBP12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 WDR6Q9NNW5 1121 aaKnown RBP12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 OLFML3Q9NRN5 406 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 PANK4Q9NVE7 773 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 SEL1LQ9UBV2 794 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 USTQ9Y2C2 406 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 NR2E1Q9Y466 385 aa12.07□□□□□ -0.48
LPCAT4-202ENST00000562404 ZDBF2Q9HCK1 2354 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 WDR27A2RRH5 827 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 SPTLC1O15269 473 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 C1RP00736 705 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 C8AP07357 584 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 GAP43P17677 238 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 SCP2P22307 547 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 HOXD13P35453 343 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 ROR1Q01973 937 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 CREMQ03060 361 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 PPP2R3AQ06190 1150 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 L1TD1Q5T7N2 865 aaKnown RBP12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 SPATA1Q5VX52 437 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 ADALQ6DHV7 355 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 POTEHQ6S545 545 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 TRIM67Q6ZTA4 783 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 CCDC149Q6ZUS6 474 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 EFCAB13Q8IY85 973 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 ZDHHC14Q8IZN3 488 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 TDRD5Q8NAT2 981 aaKnown RBP12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 ST13P5Q8NFI4 369 aaPredicted RBP12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 HVCN1Q96D96 273 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 RHOBTB2Q9BYZ6 727 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms