RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 A0A1W2PQ45 241 aaPredicted RBP12.47□□□□□ -0.41
PCAT1-202ENST00000561978 A0A1W2PQY0 241 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 ZNF233A6NK53 670 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 LRRIQ3A6PVS8 624 aaPredicted RBP12.47□□□□□ -0.41
PCAT1-202ENST00000561978 TMCO5BA8MYB1 307 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 NOP56O00567 594 aaKnown RBP12.47□□□□□ -0.41
PCAT1-202ENST00000561978 ZC3H11AO75152 810 aaKnown RBP eCLIP12.47□□□□□ -0.41
PCAT1-202ENST00000561978 LRRN2O75325 713 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 OATP04181 439 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 ADRB2P07550 413 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 MYL3P08590 195 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 COL6A1P12109 1028 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 GZMAP12544 262 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 HADHBP55084 474 aaKnown RBP12.47□□□□□ -0.41
PCAT1-202ENST00000561978 CYP24A1Q07973 514 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 SLFN12LQ6IEE8 588 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 METTL7BQ6UX53 244 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 ENOSF1Q7L5Y1 443 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 ARHGEF19Q8IW93 802 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 FAM71AQ8IYT1 594 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 FBXL13Q8NEE6 735 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 PPTC7Q8NI37 304 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 PLEKHO2Q8TD55 490 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 AENQ8WTP8 325 aaKnown RBP12.47□□□□□ -0.41
PCAT1-202ENST00000561978 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.47□□□□□ -0.41
PCAT1-202ENST00000561978 BSNDQ8WZ55 320 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 CCDC127Q96BQ5 260 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 NIFKQ9BYG3 293 aaKnown RBP12.47□□□□□ -0.41
PCAT1-202ENST00000561978 POLR3FQ9H1D9 316 aaPredicted RBP12.47□□□□□ -0.41
PCAT1-202ENST00000561978 ISCUQ9H1K1 167 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 XPNPEP1Q9NQW7 623 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 GEMIN8Q9NWZ8 242 aaKnown RBP12.47□□□□□ -0.41
PCAT1-202ENST00000561978 DMGDHQ9UI17 866 aaKnown RBP12.47□□□□□ -0.41
PCAT1-202ENST00000561978 PACSIN2Q9UNF0 486 aaPredicted RBP12.47□□□□□ -0.41
PCAT1-202ENST00000561978 STXBP5LQ9Y2K9 1186 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 MYH9P35579 1960 aaKnown RBP12.47□□□□□ -0.41
PCAT1-202ENST00000561978 CCDC188H7C350 402 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 PGRMC1O00264 195 aaKnown RBP12.47□□□□□ -0.41
PCAT1-202ENST00000561978 RTN2O75298 545 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 ZMYND10O75800 440 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 ZNF286BP0CG31 522 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 RFC5P40937 340 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 DNA2P51530 1060 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 NKX3-2P78367 333 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 NNTQ13423 1086 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 EMC2Q15006 297 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 MTERF2Q49AM1 385 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 FAM160B1Q5W0V3 765 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 NT5DC3Q86UY8 548 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 OLIG1Q8TAK6 271 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 SLC7A3Q8WY07 619 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 EMID1Q96A84 441 aaPredicted RBP12.47□□□□□ -0.41
PCAT1-202ENST00000561978 SAAL1Q96ER3 474 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 HES6Q96HZ4 224 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 NT5C1BQ96P26 610 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.47□□□□□ -0.41
PCAT1-202ENST00000561978 KIFC3Q9BVG8 833 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 STARD7Q9NQZ5 370 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 RAB20Q9NX57 234 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 PCDH10Q9P2E7 1040 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 TMEM59LQ9UK28 342 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 PHF24Q9UPV7 400 aa12.47□□□□□ -0.41
PCAT1-202ENST00000561978 IGKV6D-21A0A0A0MT36 114 aa12.46□□□□□ -0.41
PCAT1-202ENST00000561978 MOXD2PA6NHM9 499 aa12.46□□□□□ -0.41
PCAT1-202ENST00000561978 EXTL3O43909 919 aa12.46□□□□□ -0.41
PCAT1-202ENST00000561978 CEP104O60308 925 aa12.46□□□□□ -0.41
PCAT1-202ENST00000561978 LDHAP00338 332 aaKnown RBP12.46□□□□□ -0.41
PCAT1-202ENST00000561978 USP8P40818 1118 aa12.46□□□□□ -0.41
PCAT1-202ENST00000561978 NAMPTP43490 491 aa12.46□□□□□ -0.41
PCAT1-202ENST00000561978 LIG4P49917 911 aa12.46□□□□□ -0.41
PCAT1-202ENST00000561978 GPC5P78333 572 aa12.46□□□□□ -0.41
PCAT1-202ENST00000561978 PURAQ00577 322 aaKnown RBP12.46□□□□□ -0.41
PCAT1-202ENST00000561978 EXOC8Q8IYI6 725 aa12.46□□□□□ -0.41
PCAT1-202ENST00000561978 PPM1KQ8N3J5 372 aa12.46□□□□□ -0.41
PCAT1-202ENST00000561978 RASGEF1CQ8N431 466 aa12.46□□□□□ -0.41
PCAT1-202ENST00000561978 EIF1ADQ8N9N8 165 aaKnown RBP12.46□□□□□ -0.41
PCAT1-202ENST00000561978 GLT1D1Q96MS3 346 aa12.46□□□□□ -0.41
PCAT1-202ENST00000561978 NAP1L3Q99457 506 aaPredicted RBP12.46□□□□□ -0.41
PCAT1-202ENST00000561978 TSEN34Q9BSV6 310 aaKnown RBP12.46□□□□□ -0.41
PCAT1-202ENST00000561978 TMEM121BQ9BXQ6 578 aaPredicted RBP12.46□□□□□ -0.41
PCAT1-202ENST00000561978 DHX33Q9H6R0 707 aaKnown RBP12.46□□□□□ -0.41
PCAT1-202ENST00000561978 GDF3Q9NR23 364 aa12.46□□□□□ -0.41
PCAT1-202ENST00000561978 SMARCAL1Q9NZC9 954 aa12.46□□□□□ -0.41
PCAT1-202ENST00000561978 EHD2Q9NZN4 543 aa12.46□□□□□ -0.41
PCAT1-202ENST00000561978 TTC7AQ9ULT0 858 aaPredicted RBP12.46□□□□□ -0.41
PCAT1-202ENST00000561978 HPCAL4Q9UM19 191 aa12.46□□□□□ -0.41
PCAT1-202ENST00000561978 ARID2Q68CP9 1835 aa12.46□□□□□ -0.42
PCAT1-202ENST00000561978 ZEB2O60315 1214 aa12.45□□□□□ -0.42
PCAT1-202ENST00000561978 FTLP02792 175 aaPredicted RBP12.45□□□□□ -0.42
PCAT1-202ENST00000561978 ABCB4P21439 1286 aa12.45□□□□□ -0.42
PCAT1-202ENST00000561978 SLC7A5Q01650 507 aa12.45□□□□□ -0.42
PCAT1-202ENST00000561978 PPP2R5EQ16537 467 aa12.45□□□□□ -0.42
PCAT1-202ENST00000561978 DGKDQ16760 1214 aa12.45□□□□□ -0.42
PCAT1-202ENST00000561978 SLC39A4Q6P5W5 647 aa12.45□□□□□ -0.42
PCAT1-202ENST00000561978 TRIM50Q86XT4 487 aa12.45□□□□□ -0.42
PCAT1-202ENST00000561978 RPUSD2Q8IZ73 545 aaKnown RBP12.45□□□□□ -0.42
PCAT1-202ENST00000561978 METTL13Q8N6R0 699 aa12.45□□□□□ -0.42
PCAT1-202ENST00000561978 ZSWIM2Q8NEG5 633 aa12.45□□□□□ -0.42
PCAT1-202ENST00000561978 DEPTORQ8TB45 409 aa12.45□□□□□ -0.42
PCAT1-202ENST00000561978 HDAC7Q8WUI4 952 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms