RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 C6P13671 934 aa7.9□□□□□ -1.14
SMG1-204ENST00000561940 PCSK1P29120 753 aa7.9□□□□□ -1.14
SMG1-204ENST00000561940 HK3P52790 923 aa7.9□□□□□ -1.14
SMG1-204ENST00000561940 RABGGTBP53611 331 aa7.9□□□□□ -1.14
SMG1-204ENST00000561940 PTTG1IPP53801 180 aa7.9□□□□□ -1.14
SMG1-204ENST00000561940 ZNF280AP59817 542 aaPredicted RBP7.9□□□□□ -1.14
SMG1-204ENST00000561940 RAB1AP62820 205 aa7.9□□□□□ -1.14
SMG1-204ENST00000561940 CNN3Q15417 329 aaKnown RBP7.9□□□□□ -1.14
SMG1-204ENST00000561940 KHDC1Q4VXA5 237 aaKnown RBP7.9□□□□□ -1.14
SMG1-204ENST00000561940 CCDC157Q569K6 752 aa7.9□□□□□ -1.14
SMG1-204ENST00000561940 PRAMEF14Q5SWL7 426 aa7.9□□□□□ -1.14
SMG1-204ENST00000561940 ANKS6Q68DC2 871 aa7.9□□□□□ -1.14
SMG1-204ENST00000561940 DAAM2Q86T65 1068 aa7.9□□□□□ -1.14
SMG1-204ENST00000561940 RSPH3Q86UC2 560 aa7.9□□□□□ -1.14
SMG1-204ENST00000561940 IFI44Q8TCB0 444 aa7.9□□□□□ -1.14
SMG1-204ENST00000561940 LSM14BQ9BX40 385 aaKnown RBP7.9□□□□□ -1.14
SMG1-204ENST00000561940 LANCL2Q9NS86 450 aa7.9□□□□□ -1.14
SMG1-204ENST00000561940 L1RE1Q9UN81 338 aa7.9□□□□□ -1.14
SMG1-204ENST00000561940 POLHQ9Y253 713 aa7.9□□□□□ -1.14
SMG1-204ENST00000561940 XDHP47989 1333 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 ANO9A1A5B4 782 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 NPIPB8E9PQR5 432 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 FAM20BO75063 409 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 FSHBP01225 129 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 SLC5A1P13866 664 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 PHKG2P15735 406 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 GUCY1A2P33402 732 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 PTPN7P35236 360 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 PICALMQ13492 652 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 SEMA5AQ13591 1074 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 BRD3Q15059 726 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 C1QL3Q5VWW1 255 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 APBB1IPQ7Z5R6 666 aaPredicted RBP7.89□□□□□ -1.15
SMG1-204ENST00000561940 TMPRSS6Q8IU80 811 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 SH2D3CQ8N5H7 860 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 C3orf20Q8ND61 904 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 ZNF503Q96F45 646 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 CEP95Q96GE4 821 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 NAA15Q9BXJ9 866 aaKnown RBP7.89□□□□□ -1.15
SMG1-204ENST00000561940 CPEB1Q9BZB8 566 aaKnown RBP7.89□□□□□ -1.15
SMG1-204ENST00000561940 ZNF700Q9H0M5 742 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 SPON1Q9HCB6 807 aa7.89□□□□□ -1.15
SMG1-204ENST00000561940 KLRG2A4D1S0 409 aaPredicted RBP7.88□□□□□ -1.15
SMG1-204ENST00000561940 CAPN8A6NHC0 703 aa7.88□□□□□ -1.15
SMG1-204ENST00000561940 GPR32O75388 356 aa7.88□□□□□ -1.15
SMG1-204ENST00000561940 CRHR1P34998 444 aa7.88□□□□□ -1.15
SMG1-204ENST00000561940 IL12RB1P42701 662 aa7.88□□□□□ -1.15
SMG1-204ENST00000561940 ATP8B2P98198 1209 aa7.88□□□□□ -1.15
SMG1-204ENST00000561940 TLE1Q04724 770 aa7.88□□□□□ -1.15
SMG1-204ENST00000561940 MTM1Q13496 603 aa7.88□□□□□ -1.15
SMG1-204ENST00000561940 RNF220Q5VTB9 566 aa7.88□□□□□ -1.15
SMG1-204ENST00000561940 HEATR3Q7Z4Q2 680 aa7.88□□□□□ -1.15
SMG1-204ENST00000561940 FAM83AQ86UY5 434 aa7.88□□□□□ -1.15
SMG1-204ENST00000561940 Q8N1X5 172 aa7.88□□□□□ -1.15
SMG1-204ENST00000561940 CELF5Q8N6W0 485 aaKnown RBP7.88□□□□□ -1.15
SMG1-204ENST00000561940 DCBLD1Q8N8Z6 715 aa7.88□□□□□ -1.15
SMG1-204ENST00000561940 SENP6Q9GZR1 1112 aaPredicted RBP7.88□□□□□ -1.15
SMG1-204ENST00000561940 ATP6V0A4Q9HBG4 840 aa7.88□□□□□ -1.15
SMG1-204ENST00000561940 LMBRD1Q9NUN5 540 aa7.88□□□□□ -1.15
SMG1-204ENST00000561940 CEP72Q9P209 647 aa7.88□□□□□ -1.15
SMG1-204ENST00000561940 ABCF2Q9UG63 623 aa7.88□□□□□ -1.15
SMG1-204ENST00000561940 PHTF1Q9UMS5 762 aa7.88□□□□□ -1.15
SMG1-204ENST00000561940 RUVBL1Q9Y265 456 aaKnown RBP7.88□□□□□ -1.15
SMG1-204ENST00000561940 ACTL7AQ9Y615 435 aa7.88□□□□□ -1.15
SMG1-204ENST00000561940 SLC16A6O15403 523 aa7.87□□□□□ -1.15
SMG1-204ENST00000561940 PQBP1O60828 265 aaKnown RBP7.87□□□□□ -1.15
SMG1-204ENST00000561940 IFIT2P09913 472 aaKnown RBP7.87□□□□□ -1.15
SMG1-204ENST00000561940 DDCP20711 480 aa7.87□□□□□ -1.15
SMG1-204ENST00000561940 PEX2P28328 305 aa7.87□□□□□ -1.15
SMG1-204ENST00000561940 FAM193AP78312 1265 aa7.87□□□□□ -1.15
SMG1-204ENST00000561940 NKX6-1P78426 367 aaPredicted RBP7.87□□□□□ -1.15
SMG1-204ENST00000561940 PTH1RQ03431 593 aa7.87□□□□□ -1.15
SMG1-204ENST00000561940 SNAPC2Q13487 334 aa7.87□□□□□ -1.15
SMG1-204ENST00000561940 PLS1Q14651 629 aa7.87□□□□□ -1.15
SMG1-204ENST00000561940 LSM12Q3MHD2 195 aaKnown RBP7.87□□□□□ -1.15
SMG1-204ENST00000561940 GJC2Q5T442 439 aaPredicted RBP7.87□□□□□ -1.15
SMG1-204ENST00000561940 THEMIS2Q5TEJ8 643 aa7.87□□□□□ -1.15
SMG1-204ENST00000561940 IGFL4Q6B9Z1 124 aa7.87□□□□□ -1.15
SMG1-204ENST00000561940 DARS2Q6PI48 645 aaKnown RBP7.87□□□□□ -1.15
SMG1-204ENST00000561940 CRIP3Q6Q6R5 217 aa7.87□□□□□ -1.15
SMG1-204ENST00000561940 MAEAQ7L5Y9 396 aa7.87□□□□□ -1.15
SMG1-204ENST00000561940 FBXO41Q8TF61 875 aa7.87□□□□□ -1.15
SMG1-204ENST00000561940 SLC35A4Q96G79 324 aa7.87□□□□□ -1.15
SMG1-204ENST00000561940 CDK5RAP3Q96JB5 506 aa7.87□□□□□ -1.15
SMG1-204ENST00000561940 POLR3GLQ9BT43 218 aa7.87□□□□□ -1.15
SMG1-204ENST00000561940 ZMAT3Q9HA38 289 aaKnown RBP7.87□□□□□ -1.15
SMG1-204ENST00000561940 HS3ST3A1Q9Y663 406 aa7.87□□□□□ -1.15
SMG1-204ENST00000561940 A0A088AWK7 358 aa7.86□□□□□ -1.15
SMG1-204ENST00000561940 GOLGA6L6A8MZA4 724 aa7.86□□□□□ -1.15
SMG1-204ENST00000561940 H3BUI4 141 aa7.86□□□□□ -1.15
SMG1-204ENST00000561940 RPLP2P05387 115 aaKnown RBP7.86□□□□□ -1.15
SMG1-204ENST00000561940 MALP21145 153 aa7.86□□□□□ -1.15
SMG1-204ENST00000561940 TACR2P21452 398 aa7.86□□□□□ -1.15
SMG1-204ENST00000561940 SERPINB3P29508 390 aa7.86□□□□□ -1.15
SMG1-204ENST00000561940 ALDH1A3P47895 512 aa7.86□□□□□ -1.15
SMG1-204ENST00000561940 MIIPQ5JXC2 388 aa7.86□□□□□ -1.15
SMG1-204ENST00000561940 MFSD14BQ5SR56 506 aa7.86□□□□□ -1.15
SMG1-204ENST00000561940 APOA5Q6Q788 366 aa7.86□□□□□ -1.15
SMG1-204ENST00000561940 GADL1Q6ZQY3 521 aa7.86□□□□□ -1.15
SMG1-204ENST00000561940 SAMD3Q8N6K7 520 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms