RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 TUT1Q9H6E5 874 aaKnown RBP7.07□□□□□ -1.28
CAPN3-210ENST00000561817 SUGCTQ9HAC7 445 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 IFT122Q9HBG6 1241 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 KIAA1586Q9HCI6 787 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 TMEM8AQ9HCN3 771 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 LZTFL1Q9NQ48 299 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 SLC5A4Q9NY91 659 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 MYO1AQ9UBC5 1043 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 APEX2Q9UBZ4 518 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 DNAI1Q9UI46 699 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 SALL4Q9UJQ4 1053 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 DNAJC12Q9UKB3 198 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 AGO2Q9UKV8 859 aaKnown RBP7.07□□□□□ -1.28
CAPN3-210ENST00000561817 ZHX1Q9UKY1 873 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-210ENST00000561817 Q9Y3F1 56 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 TRIM17Q9Y577 477 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 PCDHA13Q9Y5I0 950 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 ATP8B3O60423 1300 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 A0A087X0T9 212 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 MBLAC1A4D2B0 266 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-210ENST00000561817 ZNF233A6NK53 670 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 CFAP99D6REC4 459 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 FOXN3O00409 490 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-210ENST00000561817 DDX3XO00571 662 aaKnown RBP eCLIP7.06□□□□□ -1.28
CAPN3-210ENST00000561817 ACKR2O00590 384 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 MEFVO15553 781 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-210ENST00000561817 DYNC1LI2O43237 492 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-210ENST00000561817 TOM1L1O75674 476 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 PARNO95453 639 aaKnown RBP7.06□□□□□ -1.28
CAPN3-210ENST00000561817 VNN1O95497 513 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 MYCP01106 439 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-210ENST00000561817 PRKCBP05771 671 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 FAM228BP0C875 321 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 PNMA6AP0CW24 399 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-210ENST00000561817 SRGAP2CP0DJJ0 459 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 CYP2B6P20813 491 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 SOX5P35711 763 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 STAT1P42224 750 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 MXI1P50539 228 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 AMPD2Q01433 879 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 GFPT1Q06210 699 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-210ENST00000561817 KLHL30Q0D2K2 578 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 STRN3Q13033 797 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 NNTQ13423 1086 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 GRIK4Q16099 956 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 SLC18A3Q16572 532 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 DGKDQ16760 1214 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 PTPROQ16827 1216 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 ZACNQ401N2 412 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 SLC9C1Q4G0N8 1177 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 EEF1DP3Q658K8 133 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 KRT39Q6A163 491 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 SCARA3Q6AZY7 606 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 TSHZ1Q6ZSZ6 1077 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 RHPN2Q8IUC4 686 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 BRSK2Q8IWQ3 736 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 FAM71AQ8IYT1 594 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 KIAA0319LQ8IZA0 1049 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 CNPY4Q8N129 248 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 SLC35F6Q8N357 371 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 RNF149Q8NC42 400 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 LRRN4CLQ8ND94 238 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 LNX1Q8TBB1 728 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-210ENST00000561817 TAS1R2Q8TE23 839 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 SHC3Q92529 594 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 KAT5Q92993 513 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 JAKMIP2Q96AA8 810 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 VTI1AQ96AJ9 217 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 LENG1Q96BZ8 264 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-210ENST00000561817 BICD1Q96G01 975 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 CFHR5Q9BXR6 569 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 MRPL4Q9BYD3 311 aaKnown RBP7.06□□□□□ -1.28
CAPN3-210ENST00000561817 ADAMTS10Q9H324 1103 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 CUEDC1Q9NWM3 386 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-210ENST00000561817 NXF1Q9UBU9 619 aaKnown RBP7.06□□□□□ -1.28
CAPN3-210ENST00000561817 BZW2Q9Y6E2 419 aaKnown RBP7.06□□□□□ -1.28
CAPN3-210ENST00000561817 DUSP10Q9Y6W6 482 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 ANK1P16157 1881 aa7.06□□□□□ -1.28
CAPN3-210ENST00000561817 hCG_2014768A0A024R1R8 64 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 UQCRHLA0A096LP55 91 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 BTNL10A8MVZ5 291 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 OGTO15294 1046 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 B4GALT5O43286 388 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 AKR1B10O60218 316 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 KIF5CO60282 957 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 GFPT2O94808 682 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 LDHAP00338 332 aaKnown RBP7.05□□□□□ -1.28
CAPN3-210ENST00000561817 UQCRHP07919 91 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 CYBAP13498 195 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 FERP16591 822 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 TNFSF9P41273 254 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 MAGEA1P43355 309 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 PSMC4P43686 418 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 ACOT2P49753 483 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 FCGRTP55899 365 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 LACTBP83111 547 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-210ENST00000561817 PPFIA1Q13136 1202 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 PRPF4BQ13523 1007 aaKnown RBP7.05□□□□□ -1.28
CAPN3-210ENST00000561817 TFDP1Q14186 410 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 MAPK6Q16659 721 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms