RNA–Protein interactions for RNA: ENST00000561610.1

PPP4C-202, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4C, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-202ENST00000561610 LMCD1Q9NZU5 365 aa20.23■□□□□ 0.83
PPP4C-202ENST00000561610 ADAM28Q9UKQ2 775 aa20.23■□□□□ 0.83
PPP4C-202ENST00000561610 NUB1Q9Y5A7 615 aa20.23■□□□□ 0.83
PPP4C-202ENST00000561610 PCDHGC5Q9Y5F6 944 aa20.23■□□□□ 0.83
PPP4C-202ENST00000561610 BDP1A6H8Y1 2624 aa20.22■□□□□ 0.83
PPP4C-202ENST00000561610 PDCD11Q14690 1871 aaKnown RBP20.22■□□□□ 0.83
PPP4C-202ENST00000561610 C2CD2LO14523 706 aa20.22■□□□□ 0.83
PPP4C-202ENST00000561610 KIF4AO95239 1232 aa20.22■□□□□ 0.83
PPP4C-202ENST00000561610 MBD3O95983 291 aa20.22■□□□□ 0.83
PPP4C-202ENST00000561610 MCM4P33991 863 aa20.22■□□□□ 0.83
PPP4C-202ENST00000561610 IRS1P35568 1242 aa20.22■□□□□ 0.83
PPP4C-202ENST00000561610 ERVFC1P60507 584 aa20.22■□□□□ 0.83
PPP4C-202ENST00000561610 SNRNP35Q16560 246 aaKnown RBP20.22■□□□□ 0.83
PPP4C-202ENST00000561610 FUT10Q6P4F1 479 aa20.22■□□□□ 0.83
PPP4C-202ENST00000561610 DCLRE1AQ6PJP8 1040 aa20.22■□□□□ 0.83
PPP4C-202ENST00000561610 DDX53Q86TM3 631 aaKnown RBP20.22■□□□□ 0.83
PPP4C-202ENST00000561610 TMEM130Q8N3G9 435 aa20.22■□□□□ 0.83
PPP4C-202ENST00000561610 SPATA20Q8TB22 786 aa20.22■□□□□ 0.83
PPP4C-202ENST00000561610 PPP2R3CQ969Q6 453 aa20.22■□□□□ 0.83
PPP4C-202ENST00000561610 CCDC127Q96BQ5 260 aa20.22■□□□□ 0.83
PPP4C-202ENST00000561610 DDX27Q96GQ7 796 aaKnown RBP20.22■□□□□ 0.83
PPP4C-202ENST00000561610 FNBP1Q96RU3 617 aa20.22■□□□□ 0.83
PPP4C-202ENST00000561610 NSUN3Q9H649 340 aaKnown RBP20.22■□□□□ 0.83
PPP4C-202ENST00000561610 IGFLR1Q9H665 355 aa20.22■□□□□ 0.83
PPP4C-202ENST00000561610 PDE11AQ9HCR9 933 aa20.22■□□□□ 0.83
PPP4C-202ENST00000561610 KIAA1468Q9P260 1216 aa20.22■□□□□ 0.83
PPP4C-202ENST00000561610 LZTS1Q9Y250 596 aa20.22■□□□□ 0.83
PPP4C-202ENST00000561610 PSMA7O14818 248 aa20.21■□□□□ 0.83
PPP4C-202ENST00000561610 CLSTN1O94985 981 aa20.21■□□□□ 0.83
PPP4C-202ENST00000561610 TMEM191BP0C7N4 346 aa20.21■□□□□ 0.83
PPP4C-202ENST00000561610 DLATP10515 647 aaKnown RBP20.21■□□□□ 0.83
PPP4C-202ENST00000561610 SMC1AQ14683 1233 aaKnown RBP20.21■□□□□ 0.83
PPP4C-202ENST00000561610 SURF1Q15526 300 aa20.21■□□□□ 0.83
PPP4C-202ENST00000561610 LMBRD2Q68DH5 695 aaPredicted RBP20.21■□□□□ 0.83
PPP4C-202ENST00000561610 RBM23Q86U06 439 aaKnown RBP20.21■□□□□ 0.83
PPP4C-202ENST00000561610 CEP57Q86XR8 500 aa20.21■□□□□ 0.83
PPP4C-202ENST00000561610 CACTINQ8WUQ7 758 aaKnown RBP20.21■□□□□ 0.83
PPP4C-202ENST00000561610 AUTS2Q8WXX7 1259 aa20.21■□□□□ 0.83
PPP4C-202ENST00000561610 FRMD4BQ9Y2L6 1034 aa20.21■□□□□ 0.83
PPP4C-202ENST00000561610 R3HCC1Q9Y3T6 440 aaKnown RBP20.21■□□□□ 0.83
PPP4C-202ENST00000561610 ANK1P16157 1881 aa20.2■□□□□ 0.82
PPP4C-202ENST00000561610 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.2■□□□□ 0.82
PPP4C-202ENST00000561610 CXCL14O95715 111 aa20.2■□□□□ 0.82
PPP4C-202ENST00000561610 URODP06132 367 aa20.2■□□□□ 0.82
PPP4C-202ENST00000561610 TNNI1P19237 187 aa20.2■□□□□ 0.82
PPP4C-202ENST00000561610 NR2F2P24468 414 aa20.2■□□□□ 0.82
PPP4C-202ENST00000561610 RPL13P26373 211 aaKnown RBP20.2■□□□□ 0.82
PPP4C-202ENST00000561610 RPL9P32969 192 aaKnown RBP20.2■□□□□ 0.82
PPP4C-202ENST00000561610 POU5F1Q01860 360 aaKnown RBP20.2■□□□□ 0.82
PPP4C-202ENST00000561610 MORC3Q14149 939 aa20.2■□□□□ 0.82
PPP4C-202ENST00000561610 UPP1Q16831 310 aa20.2■□□□□ 0.82
PPP4C-202ENST00000561610 TCEAL5Q5H9L2 206 aa20.2■□□□□ 0.82
PPP4C-202ENST00000561610 C12orf56Q8IXR9 622 aa20.2■□□□□ 0.82
PPP4C-202ENST00000561610 ANKRD36BP1Q96IX9 119 aa20.2■□□□□ 0.82
PPP4C-202ENST00000561610 B3GALT6Q96L58 329 aa20.2■□□□□ 0.82
PPP4C-202ENST00000561610 TSPAN18Q96SJ8 248 aa20.2■□□□□ 0.82
PPP4C-202ENST00000561610 NGRNQ9NPE2 291 aaKnown RBP20.2■□□□□ 0.82
PPP4C-202ENST00000561610 DPP3Q9NY33 737 aa20.2■□□□□ 0.82
PPP4C-202ENST00000561610 CTNND2Q9UQB3 1225 aa20.2■□□□□ 0.82
PPP4C-202ENST00000561610 DERAQ9Y315 318 aa20.2■□□□□ 0.82
PPP4C-202ENST00000561610 C2CD2Q9Y426 696 aa20.2■□□□□ 0.82
PPP4C-202ENST00000561610 SF3B1O75533 1304 aaKnown RBP eCLIP20.2■□□□□ 0.826e-6■■■■■ 103.4
PPP4C-202ENST00000561610 SOD2P04179 222 aa20.19■□□□□ 0.82
PPP4C-202ENST00000561610 ADRB2P07550 413 aa20.19■□□□□ 0.82
PPP4C-202ENST00000561610 KRT19P08727 400 aa20.19■□□□□ 0.82
PPP4C-202ENST00000561610 CYP3A5P20815 502 aa20.19■□□□□ 0.82
PPP4C-202ENST00000561610 PPP1R2P41236 205 aa20.19■□□□□ 0.82
PPP4C-202ENST00000561610 BRCC3P46736 316 aa20.19■□□□□ 0.82
PPP4C-202ENST00000561610 ADAM9Q13443 819 aa20.19■□□□□ 0.82
PPP4C-202ENST00000561610 CAMK1Q14012 370 aa20.19■□□□□ 0.82
PPP4C-202ENST00000561610 FAM171A1Q5VUB5 890 aa20.19■□□□□ 0.82
PPP4C-202ENST00000561610 TAS1R1Q7RTX1 841 aa20.19■□□□□ 0.82
PPP4C-202ENST00000561610 EFCAB13Q8IY85 973 aa20.19■□□□□ 0.82
PPP4C-202ENST00000561610 ADSSL1Q8N142 457 aa20.19■□□□□ 0.82
PPP4C-202ENST00000561610 HERC2P3Q9BVR0 1158 aa20.19■□□□□ 0.82
PPP4C-202ENST00000561610 GPR62Q9BZJ7 368 aa20.19■□□□□ 0.82
PPP4C-202ENST00000561610 ZBP1Q9H171 429 aa20.19■□□□□ 0.82
PPP4C-202ENST00000561610 TLE6Q9H808 572 aa20.19■□□□□ 0.82
PPP4C-202ENST00000561610 STK39Q9UEW8 545 aa20.19■□□□□ 0.82
PPP4C-202ENST00000561610 TRAF3IP3Q9Y228 551 aa20.19■□□□□ 0.82
PPP4C-202ENST00000561610 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.19■□□□□ 0.82
PPP4C-202ENST00000561610 I3L4J1 428 aa20.18■□□□□ 0.82
PPP4C-202ENST00000561610 TRAPPC3O43617 180 aa20.18■□□□□ 0.82
PPP4C-202ENST00000561610 TNNC2P02585 160 aa20.18■□□□□ 0.82
PPP4C-202ENST00000561610 POU3F3P20264 500 aaPredicted RBP20.18■□□□□ 0.82
PPP4C-202ENST00000561610 GLUD2P49448 558 aa20.18■□□□□ 0.82
PPP4C-202ENST00000561610 WNT7BP56706 349 aa20.18■□□□□ 0.82
PPP4C-202ENST00000561610 CYP24A1Q07973 514 aa20.18■□□□□ 0.82
PPP4C-202ENST00000561610 ELAVL2Q12926 359 aaKnown RBP20.18■□□□□ 0.82
PPP4C-202ENST00000561610 SPATA1Q5VX52 437 aa20.18■□□□□ 0.82
PPP4C-202ENST00000561610 PDE12Q6L8Q7 609 aaKnown RBP20.18■□□□□ 0.82
PPP4C-202ENST00000561610 TRIML1Q8N9V2 468 aa20.18■□□□□ 0.82
PPP4C-202ENST00000561610 FAM84AQ96KN4 292 aa20.18■□□□□ 0.82
PPP4C-202ENST00000561610 VN1R3Q9BXE9 311 aa20.18■□□□□ 0.82
PPP4C-202ENST00000561610 MRPL17Q9NRX2 175 aaKnown RBP20.18■□□□□ 0.82
PPP4C-202ENST00000561610 CHD9Q3L8U1 2897 aa20.17■□□□□ 0.82
PPP4C-202ENST00000561610 XIRP2A4UGR9 3374 aa20.17■□□□□ 0.82
PPP4C-202ENST00000561610 TRIM49BA6NDI0 452 aa20.17■□□□□ 0.82
PPP4C-202ENST00000561610 PER2O15055 1255 aa20.17■□□□□ 0.82
PPP4C-202ENST00000561610 CETN3O15182 167 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms