RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 POU3F3P20264 500 aaPredicted RBP17.71■□□□□ 0.43
USB1-204ENST00000561568 AP3M2P53677 418 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 TFAMQ00059 246 aaKnown RBP17.71■□□□□ 0.43
USB1-204ENST00000561568 SOX4Q06945 474 aaPredicted RBP17.71■□□□□ 0.43
USB1-204ENST00000561568 NFKBIBQ15653 356 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 TTI2Q6NXR4 508 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 Q7L0L9 218 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 WDR49Q8IV35 697 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 ZC3H3Q8IXZ2 948 aaKnown RBP17.71■□□□□ 0.43
USB1-204ENST00000561568 FAM186BQ8IYM0 893 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 PARD3BQ8TEW8 1205 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 POF1BQ8WVV4 589 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 ANKRD36BP1Q96IX9 119 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 PAAF1Q9BRP4 392 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 INTS13Q9NVM9 706 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 ANO10Q9NW15 660 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 MTMR10Q9NXD2 777 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 ADAM28Q9UKQ2 775 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 CTNND2Q9UQB3 1225 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 TRIM49BA6NDI0 452 aa17.7■□□□□ 0.42
USB1-204ENST00000561568 EPOPA6NHQ4 379 aa17.7■□□□□ 0.42
USB1-204ENST00000561568 PODXLO00592 558 aa17.7■□□□□ 0.42
USB1-204ENST00000561568 GRM6O15303 877 aa17.7■□□□□ 0.42
USB1-204ENST00000561568 TNNC2P02585 160 aa17.7■□□□□ 0.42
USB1-204ENST00000561568 TMEM191BP0C7N4 346 aa17.7■□□□□ 0.42
USB1-204ENST00000561568 DLATP10515 647 aaKnown RBP17.7■□□□□ 0.42
USB1-204ENST00000561568 EPB41P11171 864 aaKnown RBP17.7■□□□□ 0.42
USB1-204ENST00000561568 MCCD1P59942 119 aaPredicted RBP17.7■□□□□ 0.42
USB1-204ENST00000561568 CLDN10P78369 228 aa17.7■□□□□ 0.42
USB1-204ENST00000561568 ELAVL2Q12926 359 aaKnown RBP17.7■□□□□ 0.42
USB1-204ENST00000561568 DPCR1Q3MIW9 517 aa17.7■□□□□ 0.42
USB1-204ENST00000561568 EFCAB13Q8IY85 973 aa17.7■□□□□ 0.42
USB1-204ENST00000561568 CSGALNACT2Q8N6G5 542 aa17.7■□□□□ 0.42
USB1-204ENST00000561568 RABGGTAQ92696 567 aa17.7■□□□□ 0.42
USB1-204ENST00000561568 CDX2Q99626 313 aaPredicted RBP17.7■□□□□ 0.42
USB1-204ENST00000561568 DUSP9Q99956 384 aaKnown RBP17.7■□□□□ 0.42
USB1-204ENST00000561568 GOLGA2P5Q9HBQ8 144 aa17.7■□□□□ 0.42
USB1-204ENST00000561568 METTL14Q9HCE5 456 aaKnown RBP17.7■□□□□ 0.42
USB1-204ENST00000561568 TUBGCP4Q9UGJ1 667 aa17.7■□□□□ 0.42
USB1-204ENST00000561568 R3HCC1Q9Y3T6 440 aaKnown RBP17.7■□□□□ 0.42
USB1-204ENST00000561568 TDRD15B5MCY1 1934 aaKnown RBP17.7■□□□□ 0.42
USB1-204ENST00000561568 ANO9A1A5B4 782 aa17.69■□□□□ 0.42
USB1-204ENST00000561568 SLC16A3O15427 465 aaKnown RBP17.69■□□□□ 0.42
USB1-204ENST00000561568 LPXNO60711 386 aa17.69■□□□□ 0.42
USB1-204ENST00000561568 GNA14O95837 355 aa17.69■□□□□ 0.42
USB1-204ENST00000561568 VAMP7P51809 220 aa17.69■□□□□ 0.42
USB1-204ENST00000561568 WNT7BP56706 349 aa17.69■□□□□ 0.42
USB1-204ENST00000561568 STX17P56962 302 aa17.69■□□□□ 0.42
USB1-204ENST00000561568 TMEM173Q86WV6 379 aaPredicted RBP17.69■□□□□ 0.42
USB1-204ENST00000561568 MICAL1Q8TDZ2 1067 aa17.69■□□□□ 0.42
USB1-204ENST00000561568 MRPL38Q96DV4 380 aaKnown RBP17.69■□□□□ 0.42
USB1-204ENST00000561568 EEF2KMTQ96G04 330 aa17.69■□□□□ 0.42
USB1-204ENST00000561568 POP1Q99575 1024 aaKnown RBP17.69■□□□□ 0.42
USB1-204ENST00000561568 CGRRF1Q99675 332 aa17.69■□□□□ 0.42
USB1-204ENST00000561568 SRRTQ9BXP5 876 aaKnown RBP17.69■□□□□ 0.42
USB1-204ENST00000561568 NGRNQ9NPE2 291 aaKnown RBP17.69■□□□□ 0.42
USB1-204ENST00000561568 MARCH5Q9NX47 278 aa17.69■□□□□ 0.42
USB1-204ENST00000561568 ITGA11Q9UKX5 1188 aa17.69■□□□□ 0.42
USB1-204ENST00000561568 SSX2IPQ9Y2D8 614 aa17.69■□□□□ 0.42
USB1-204ENST00000561568 NUB1Q9Y5A7 615 aa17.69■□□□□ 0.42
USB1-204ENST00000561568 TRIP11Q15643 1979 aa17.69■□□□□ 0.42
USB1-204ENST00000561568 RALGAPA2Q2PPJ7 1873 aa17.69■□□□□ 0.42
USB1-204ENST00000561568 PIRO00625 290 aa17.68■□□□□ 0.42
USB1-204ENST00000561568 RBP5P82980 135 aa17.68■□□□□ 0.42
USB1-204ENST00000561568 STX1AQ16623 288 aa17.68■□□□□ 0.42
USB1-204ENST00000561568 TPD52L1Q16890 204 aaPredicted RBP17.68■□□□□ 0.42
USB1-204ENST00000561568 C9orf57Q5W0N0 161 aa17.68■□□□□ 0.42
USB1-204ENST00000561568 TMC7Q7Z402 723 aa17.68■□□□□ 0.42
USB1-204ENST00000561568 FRMD5Q7Z6J6 570 aa17.68■□□□□ 0.42
USB1-204ENST00000561568 VPS52Q8N1B4 723 aa17.68■□□□□ 0.42
USB1-204ENST00000561568 GDPD5Q8WTR4 605 aa17.68■□□□□ 0.42
USB1-204ENST00000561568 TLR9Q9NR96 1032 aa17.68■□□□□ 0.42
USB1-204ENST00000561568 CACNG4Q9UBN1 327 aa17.68■□□□□ 0.42
USB1-204ENST00000561568 SF3B1O75533 1304 aaKnown RBP eCLIP17.68■□□□□ 0.42
USB1-204ENST00000561568 LAMA2P24043 3122 aaKnown RBP17.67■□□□□ 0.42
USB1-204ENST00000561568 STX10O60499 249 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 KIF4AO95239 1232 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 CXCL14O95715 111 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 EFEMP2O95967 443 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 SOD2P04179 222 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 IGFBP4P22692 258 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 DNAJB1P25685 340 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 PNPLA4P41247 253 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 BFSP1Q12934 665 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 CAMK1Q14012 370 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 USP41Q3LFD5 358 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 KIAA1841Q6NSI8 718 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 FUT10Q6P4F1 479 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 TRAPPC11Q7Z392 1133 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 GPR65Q8IYL9 337 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 BCL7CQ8WUZ0 217 aaPredicted RBP17.67■□□□□ 0.42
USB1-204ENST00000561568 ZNF516Q92618 1163 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 BORCS6Q96GS4 357 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 GPR62Q9BZJ7 368 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 ARMCX3Q9UH62 379 aaPredicted RBP17.67■□□□□ 0.42
USB1-204ENST00000561568 AGAP1Q9UPQ3 857 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 LAMA3Q16787 3333 aa17.67■□□□□ 0.42
USB1-204ENST00000561568 LRRIQ3A6PVS8 624 aaPredicted RBP17.66■□□□□ 0.42
USB1-204ENST00000561568 F8W810 466 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 PHACTR2O75167 634 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms