RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 PIK3C3Q8NEB9 887 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 SLC35G2Q8TBE7 412 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 ZNF480Q8WV37 535 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 RIN2Q8WYP3 895 aaPredicted RBP4.69□□□□□ -1.66
HERC1-215ENST00000561436 HPS3Q969F9 1004 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 LRRC59Q96AG4 307 aaKnown RBP4.69□□□□□ -1.66
HERC1-215ENST00000561436 SLC7A6OSQ96CW6 309 aaPredicted RBP4.69□□□□□ -1.66
HERC1-215ENST00000561436 C1GALT1C1Q96EU7 318 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 KRTAP4-2Q9BYR5 136 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 GTPBP4Q9BZE4 634 aaKnown RBP4.69□□□□□ -1.66
HERC1-215ENST00000561436 ING3Q9NXR8 418 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 PLA2G3Q9NZ20 509 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 ARHGEF5Q12774 1597 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 FRMPD2Q68DX3 1309 aaPredicted RBP4.69□□□□□ -1.66
HERC1-215ENST00000561436 RNF17Q9BXT8 1623 aaKnown RBP4.68□□□□□ -1.66
HERC1-215ENST00000561436 ANKRD30AQ9BXX3 1397 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 KIF15Q9NS87 1388 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 MAP3K1Q13233 1512 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 LMTK2Q8IWU2 1503 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 DUOX2Q9NRD8 1548 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 A0A1W2PR48 441 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 A0A1W2PRX2 142 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 UBE2QL1A1L167 161 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 SLC16A6O15403 523 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 ALDH1A2O94788 518 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 NBPF7P0C2Y1 421 aaPredicted RBP4.68□□□□□ -1.66
HERC1-215ENST00000561436 GAAP10253 952 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 TNFRSF1AP19438 455 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 CTSSP25774 331 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 RBM6P78332 1123 aaKnown RBP4.68□□□□□ -1.66
HERC1-215ENST00000561436 PURAQ00577 322 aaKnown RBP4.68□□□□□ -1.66
HERC1-215ENST00000561436 CD69Q07108 199 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 GBX1Q14549 363 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 GRM7Q14831 915 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 FAM214AQ32MH5 1076 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 C19orf54Q5BKX5 351 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 ATAT1Q5SQI0 421 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 KSR2Q6VAB6 950 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 PDZD4Q76G19 769 aaPredicted RBP4.68□□□□□ -1.66
HERC1-215ENST00000561436 TAS1R1Q7RTX1 841 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 SRGAP1Q7Z6B7 1085 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 ADGRE4PQ86SQ3 457 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 TTC7BQ86TV6 843 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 RSPH3Q86UC2 560 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 D2HGDHQ8N465 521 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 PLA2G15Q8NCC3 412 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 DIS3LQ8TF46 1054 aaKnown RBP4.68□□□□□ -1.66
HERC1-215ENST00000561436 SNX33Q8WV41 574 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 EXTL1Q92935 676 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 CYFIP2Q96F07 1278 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 TAAR9Q96RI9 348 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 C1QTNF3Q9BXJ4 246 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 KRTAP4-11Q9BYQ6 195 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 SLC12A5Q9H2X9 1139 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 DMRT3Q9NQL9 472 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 ANLNQ9NQW6 1124 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 MAN1C1Q9NR34 630 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 TLR9Q9NR96 1032 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 TDP1Q9NUW8 608 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 SH3BP1Q9Y3L3 701 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 NOS1P29475 1434 aa4.68□□□□□ -1.66
HERC1-215ENST00000561436 RPRD2Q5VT52 1461 aaKnown RBP4.68□□□□□ -1.66
HERC1-215ENST00000561436 CDC42BPBQ9Y5S2 1711 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 DCCP43146 1447 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 H3BML4 177 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 PLSCR1O15162 318 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 MTSS1O43312 755 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 HTRA2O43464 458 aaPredicted RBP4.67□□□□□ -1.66
HERC1-215ENST00000561436 SGTAO43765 313 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 ARIH2O95376 493 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 GASTP01350 101 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 AMHP03971 560 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 JUNP05412 331 aaKnown RBP4.67□□□□□ -1.66
HERC1-215ENST00000561436 GYPEP15421 78 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 ADSLP30566 484 aaPredicted RBP4.67□□□□□ -1.66
HERC1-215ENST00000561436 DUSP2Q05923 314 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 OS9Q13438 667 aaPredicted RBP4.67□□□□□ -1.66
HERC1-215ENST00000561436 BRD3Q15059 726 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 ATP2B3Q16720 1220 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 SPTY2D1Q68D10 685 aaPredicted RBP4.67□□□□□ -1.66
HERC1-215ENST00000561436 RHOT1Q8IXI2 618 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 DRC7Q8IY82 874 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 MSL3Q8N5Y2 521 aaKnown RBP4.67□□□□□ -1.66
HERC1-215ENST00000561436 RUNDC1Q96C34 613 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 MTFMTQ96DP5 389 aaKnown RBP4.67□□□□□ -1.66
HERC1-215ENST00000561436 BCO1Q9HAY6 547 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.67□□□□□ -1.66
HERC1-215ENST00000561436 SCOCQ9UIL1 159 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 SERPINB13Q9UIV8 391 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 POLHQ9Y253 713 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 TSC22D4Q9Y3Q8 395 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 SLC30A1Q9Y6M5 507 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 ADGBQ8N7X0 1667 aa4.67□□□□□ -1.66
HERC1-215ENST00000561436 SETD5Q9C0A6 1442 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 CAPN14A8MX76 684 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 FAM227AF5H4B4 570 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 TMEM127O75204 238 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 CRHR1P34998 444 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 ZNF267Q14586 743 aaPredicted RBP4.66□□□□□ -1.66
HERC1-215ENST00000561436 UBE3CQ15386 1083 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms