RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 SOD2P04179 222 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 ALDH2P05091 517 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 EIF4BP23588 611 aaKnown RBP6.02□□□□□ -1.45
HERC1-213ENST00000561359 DGKGP49619 791 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 NLRP11P59045 1033 aaKnown RBP6.02□□□□□ -1.45
HERC1-213ENST00000561359 MTMR1Q13613 665 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 ALX1Q15699 326 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 PLA2G4EQ3MJ16 856 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 CCDC178Q5BJE1 867 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 PLPPR4Q7Z2D5 763 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 CACNA2D4Q7Z3S7 1137 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 KBTBD6Q86V97 674 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 IQCA1Q86XH1 822 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 ZNF280BQ86YH2 543 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 GLYCTKQ8IVS8 523 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 SPEM1Q8N4L4 309 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 SMARCC2Q8TAQ2 1214 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 HDAC7Q8WUI4 952 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 RSPH1Q8WYR4 309 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 FAM3CQ92520 227 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 ESR2Q92731 530 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 CUL5Q93034 780 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 LPPQ93052 612 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 SCLT1Q96NL6 688 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 PNMA5Q96PV4 448 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 FAM193BQ96PV7 902 aaPredicted RBP6.02□□□□□ -1.45
HERC1-213ENST00000561359 HNRNPABQ99729 332 aaKnown RBP6.02□□□□□ -1.45
HERC1-213ENST00000561359 VPS45Q9NRW7 570 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 NOP53Q9NZM5 478 aaKnown RBP6.02□□□□□ -1.45
HERC1-213ENST00000561359 KLK14Q9P0G3 267 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 SLC9A2Q9UBY0 812 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 POLIQ9UNA4 740 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 AKT3Q9Y243 479 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 FAN1Q9Y2M0 1017 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 PCDHGA5Q9Y5G8 931 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 DOCK5Q9H7D0 1870 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 LAMA4Q16363 1823 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.01□□□□□ -1.45
HERC1-213ENST00000561359 SHISA7A6NL88 538 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 TGFBR3LH3BV60 316 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 K7ESF4 209 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 MSTNO14793 375 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 TGM5O43548 720 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 RPP40O75818 363 aaKnown RBP6.01□□□□□ -1.45
HERC1-213ENST00000561359 FGAP02671 866 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 CCDC192P0DO97 292 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 PLA2G2AP14555 144 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 EPB42P16452 691 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 ITGB5P18084 799 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 CSRP1P21291 193 aaKnown RBP6.01□□□□□ -1.45
HERC1-213ENST00000561359 FGFR4P22455 802 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 WEE1P30291 646 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 RAP1GAPP47736 663 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 GLUD2P49448 558 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 SLC26A2P50443 739 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 CLCN3P51790 818 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 ACTR2P61160 394 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 FGD1P98174 961 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 UAP1L1Q3KQV9 507 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 ZNF484Q5JVG2 852 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 TWF2Q6IBS0 349 aaKnown RBP6.01□□□□□ -1.45
HERC1-213ENST00000561359 USP17L6PQ6QN14 398 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 LINC00114Q6XXX2 140 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 TAS1R1Q7RTX1 841 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 TRMT1LQ7Z2T5 733 aaKnown RBP6.01□□□□□ -1.45
HERC1-213ENST00000561359 ZNF605Q86T29 641 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 WDR5BQ86VZ2 330 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 SIRT2Q8IXJ6 389 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 DEFB124Q8NES8 71 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 ITFG1Q8TB96 612 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 URGCPQ8TCY9 931 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 MTMR8Q96EF0 704 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 ZNF668Q96K58 619 aaPredicted RBP6.01□□□□□ -1.45
HERC1-213ENST00000561359 PRIMPOLQ96LW4 560 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 PIGSQ96S52 555 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 MAP7D2Q96T17 732 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 HERC2P3Q9BVR0 1158 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 RNF41Q9H4P4 317 aaPredicted RBP6.01□□□□□ -1.45
HERC1-213ENST00000561359 SUV39H2Q9H5I1 410 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 BRD9Q9H8M2 597 aa6.01□□□□□ -1.45
HERC1-213ENST00000561359 PRG3Q9Y2Y8 225 aaPredicted RBP6.01□□□□□ -1.45
HERC1-213ENST00000561359 URB1O60287 2271 aaKnown RBP6□□□□□ -1.45
HERC1-213ENST00000561359 MYH15Q9Y2K3 1946 aa6□□□□□ -1.45
HERC1-213ENST00000561359 MEIS3P2A8K0S8 358 aa6□□□□□ -1.45
HERC1-213ENST00000561359 ADARB2-AS1A8MUL3 147 aa6□□□□□ -1.45
HERC1-213ENST00000561359 NRP1O14786 923 aa6□□□□□ -1.45
HERC1-213ENST00000561359 CCL16O15467 120 aa6□□□□□ -1.45
HERC1-213ENST00000561359 B4GALT3O60512 393 aa6□□□□□ -1.45
HERC1-213ENST00000561359 PRMT3O60678 531 aa6□□□□□ -1.45
HERC1-213ENST00000561359 XYLBO75191 536 aa6□□□□□ -1.45
HERC1-213ENST00000561359 ECI2O75521 394 aa6□□□□□ -1.45
HERC1-213ENST00000561359 OFD1O75665 1012 aa6□□□□□ -1.45
HERC1-213ENST00000561359 PAPLNO95428 1278 aa6□□□□□ -1.45
HERC1-213ENST00000561359 C22orf31O95567 290 aa6□□□□□ -1.45
HERC1-213ENST00000561359 CHRNB1P11230 501 aa6□□□□□ -1.45
HERC1-213ENST00000561359 PCP11498 1178 aaKnown RBP6□□□□□ -1.45
HERC1-213ENST00000561359 HOXB4P17483 251 aaPredicted RBP6□□□□□ -1.45
HERC1-213ENST00000561359 COL8A1P27658 744 aa6□□□□□ -1.45
HERC1-213ENST00000561359 RDXP35241 583 aaKnown RBP6□□□□□ -1.45
HERC1-213ENST00000561359 ADH7P40394 386 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms