RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 TIFAQ96CG3 184 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 PAAF1Q9BRP4 392 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 C17orf80Q9BSJ5 609 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 INTS13Q9NVM9 706 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 UBQLN1Q9UMX0 589 aaKnown RBP11.13□□□□□ -0.63
LRRC28-221ENST00000561276 FAN1Q9Y2M0 1017 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 PCDHB12Q9Y5F1 795 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 PTPRJQ12913 1337 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 LRRIQ3A6PVS8 624 aaPredicted RBP11.12□□□□□ -0.63
LRRC28-221ENST00000561276 IKBKBO14920 756 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 SLC16A3O15427 465 aaKnown RBP11.12□□□□□ -0.63
LRRC28-221ENST00000561276 GNA14O95837 355 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 LAG3P18627 525 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 RPL9P32969 192 aaKnown RBP11.12□□□□□ -0.63
LRRC28-221ENST00000561276 SLC11A1P49279 550 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 GUCY2FP51841 1108 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 NUBP1P53384 320 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 ERVK-21P61565 698 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 CLDN10P78369 228 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 BFSP1Q12934 665 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 UPP1Q16831 310 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 DUOXA2Q1HG44 320 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 EPC2Q52LR7 807 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 HSP90AA4PQ58FG1 418 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 HABP4Q5JVS0 413 aaKnown RBP11.12□□□□□ -0.63
LRRC28-221ENST00000561276 C1orf220Q5T0J3 134 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 ASTLQ6HA08 431 aaPredicted RBP11.12□□□□□ -0.63
LRRC28-221ENST00000561276 LRSAM1Q6UWE0 723 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 SPRED2Q7Z698 418 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 USP37Q86T82 979 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 WDR49Q8IV35 697 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 COLGALT1Q8NBJ5 622 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 BEST2Q8NFU1 509 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 OR5B17Q8NGF7 314 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 DDX27Q96GQ7 796 aaKnown RBP11.12□□□□□ -0.63
LRRC28-221ENST00000561276 FAM84AQ96KN4 292 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 ZNF558Q96NG5 402 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 TGS1Q96RS0 853 aaKnown RBP11.12□□□□□ -0.63
LRRC28-221ENST00000561276 CGRRF1Q99675 332 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 BPIFA3Q9BQP9 254 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 TMEM175Q9BSA9 504 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 THAP9Q9H5L6 903 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 CERS4Q9HA82 394 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 METTL14Q9HCE5 456 aaKnown RBP11.12□□□□□ -0.63
LRRC28-221ENST00000561276 SAMSN1Q9NSI8 373 aaKnown RBP11.12□□□□□ -0.63
LRRC28-221ENST00000561276 FANCLQ9NW38 375 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 TUBGCP4Q9UGJ1 667 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 ARMCX3Q9UH62 379 aaPredicted RBP11.12□□□□□ -0.63
LRRC28-221ENST00000561276 MTUS1Q9ULD2 1270 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 RWDD3Q9Y3V2 267 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 NFE2L3Q9Y4A8 694 aa11.12□□□□□ -0.63
LRRC28-221ENST00000561276 C5orf67F2Z3F1 127 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 F8W810 466 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 CST3P01034 146 aaPredicted RBP11.11□□□□□ -0.63
LRRC28-221ENST00000561276 TNNC2P02585 160 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 TMEM191BP0C7N4 346 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 IGFBP6P24592 240 aaPredicted RBP11.11□□□□□ -0.63
LRRC28-221ENST00000561276 CTNNB1P35222 781 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 AP3M2P53677 418 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 MARSP56192 900 aaKnown RBP11.11□□□□□ -0.63
LRRC28-221ENST00000561276 MYL5Q02045 173 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 ENPEPQ07075 957 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 TCERG1LQ5VWI1 586 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 SCARA3Q6AZY7 606 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 DCLRE1AQ6PJP8 1040 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 AOPEPQ8N6M6 819 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 KLHL23Q8NBE8 558 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 IGSF21Q96ID5 467 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 LRCH3Q96II8 777 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 ANKRD36BP1Q96IX9 119 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 UROC1Q96N76 676 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 SAMD11Q96NU1 681 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 COLEC11Q9BWP8 271 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 PLVAPQ9BX97 442 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 MTMR12Q9C0I1 747 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 ZNF576Q9H609 170 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 SPG21Q9NZD8 308 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 PRG3Q9Y2Y8 225 aaPredicted RBP11.11□□□□□ -0.63
LRRC28-221ENST00000561276 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.11□□□□□ -0.63
LRRC28-221ENST00000561276 SCN1AP35498 2009 aa11.11□□□□□ -0.63
LRRC28-221ENST00000561276 ANO9A1A5B4 782 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 CARNS1A5YM72 827 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 SMTNL1A8MU46 457 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 PODXLO00592 558 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 PIRO00625 290 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 ATMINO43313 823 aaPredicted RBP11.1□□□□□ -0.63
LRRC28-221ENST00000561276 TADA2AO75478 443 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 FGF18O76093 207 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 B3GAT3O94766 335 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 CAVIN2O95810 425 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 C4BPAP04003 597 aaKnown RBP11.1□□□□□ -0.63
LRRC28-221ENST00000561276 ITGB3P05106 788 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 ITGB1P05556 798 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 RB1P06400 928 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 KRT19P08727 400 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 TRIM49P0CI25 452 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 TRIM49CP0CI26 452 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 LRPAP1P30533 357 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 GCLMP48507 274 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 ZNF445P59923 1031 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms