RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PARVGQ9HBI0 331 aa17.43■□□□□ 0.38
LMX1B-204ENST00000561065 SLC38A7Q9NVC3 462 aa17.43■□□□□ 0.38
LMX1B-204ENST00000561065 TBX20Q9UMR3 447 aa17.43■□□□□ 0.38
LMX1B-204ENST00000561065 SRPRBQ9Y5M8 271 aaKnown RBP17.43■□□□□ 0.38
LMX1B-204ENST00000561065 CDY1Q9Y6F8 540 aa17.43■□□□□ 0.38
LMX1B-204ENST00000561065 MORC2Q9Y6X9 1032 aaPredicted RBP17.43■□□□□ 0.38
LMX1B-204ENST00000561065 DMDP11532 3685 aa17.42■□□□□ 0.38
LMX1B-204ENST00000561065 TTC26A0AVF1 554 aa17.42■□□□□ 0.38
LMX1B-204ENST00000561065 TISP43B9A030 160 aa17.42■□□□□ 0.38
LMX1B-204ENST00000561065 HNRNPDLO14979 420 aaKnown RBP17.42■□□□□ 0.38
LMX1B-204ENST00000561065 CLDN3O15551 220 aa17.42■□□□□ 0.38
LMX1B-204ENST00000561065 KRT18P05783 430 aaKnown RBP17.42■□□□□ 0.38
LMX1B-204ENST00000561065 NMT1P30419 496 aaKnown RBP17.42■□□□□ 0.38
LMX1B-204ENST00000561065 HOXD11P31277 338 aaPredicted RBP17.42■□□□□ 0.38
LMX1B-204ENST00000561065 GBP2P32456 591 aaPredicted RBP17.42■□□□□ 0.38
LMX1B-204ENST00000561065 NTHL1P78549 312 aa17.42■□□□□ 0.38
LMX1B-204ENST00000561065 NHLH1Q02575 133 aa17.42■□□□□ 0.38
LMX1B-204ENST00000561065 STK38Q15208 465 aa17.42■□□□□ 0.38
LMX1B-204ENST00000561065 SUGP1Q8IWZ8 645 aaKnown RBP17.42■□□□□ 0.38
LMX1B-204ENST00000561065 MYCT1Q8N699 235 aa17.42■□□□□ 0.38
LMX1B-204ENST00000561065 KRI1Q8N9T8 703 aaKnown RBP17.42■□□□□ 0.38
LMX1B-204ENST00000561065 SLC7A14Q8TBB6 771 aa17.42■□□□□ 0.38
LMX1B-204ENST00000561065 RSAD2Q8WXG1 361 aa17.42■□□□□ 0.38
LMX1B-204ENST00000561065 BICD1Q96G01 975 aa17.42■□□□□ 0.38
LMX1B-204ENST00000561065 KCNH6Q9H252 994 aa17.42■□□□□ 0.38
LMX1B-204ENST00000561065 IKZF4Q9H2S9 585 aa17.42■□□□□ 0.38
LMX1B-204ENST00000561065 KCNK12Q9HB15 430 aa17.42■□□□□ 0.38
LMX1B-204ENST00000561065 EPS15L1Q9UBC2 864 aa17.42■□□□□ 0.38
LMX1B-204ENST00000561065 A0A087X0B3 334 aa17.41■□□□□ 0.38
LMX1B-204ENST00000561065 CCL16O15467 120 aa17.41■□□□□ 0.38
LMX1B-204ENST00000561065 NARSO43776 548 aaKnown RBP17.41■□□□□ 0.38
LMX1B-204ENST00000561065 TRAK2O60296 914 aa17.41■□□□□ 0.38
LMX1B-204ENST00000561065 DDIT3P35638 169 aa17.41■□□□□ 0.38
LMX1B-204ENST00000561065 LIG4P49917 911 aa17.41■□□□□ 0.38
LMX1B-204ENST00000561065 GUCY2FP51841 1108 aa17.41■□□□□ 0.38
LMX1B-204ENST00000561065 SLC39A14Q15043 492 aa17.41■□□□□ 0.38
LMX1B-204ENST00000561065 VARS2Q5ST30 1063 aaKnown RBP17.41■□□□□ 0.38
LMX1B-204ENST00000561065 LIN9Q5TKA1 542 aa17.41■□□□□ 0.38
LMX1B-204ENST00000561065 PDXDC1Q6P996 788 aa17.41■□□□□ 0.38
LMX1B-204ENST00000561065 MAP4K3Q8IVH8 894 aa17.41■□□□□ 0.38
LMX1B-204ENST00000561065 ZHX3Q9H4I2 956 aa17.41■□□□□ 0.38
LMX1B-204ENST00000561065 PIDD1Q9HB75 910 aa17.41■□□□□ 0.38
LMX1B-204ENST00000561065 CFAP45Q9UL16 551 aa17.41■□□□□ 0.38
LMX1B-204ENST00000561065 DUSP12Q9UNI6 340 aa17.41■□□□□ 0.38
LMX1B-204ENST00000561065 BACE2Q9Y5Z0 518 aa17.41■□□□□ 0.38
LMX1B-204ENST00000561065 USP34Q70CQ2 3546 aa17.4■□□□□ 0.38
LMX1B-204ENST00000561065 WDR27A2RRH5 827 aa17.4■□□□□ 0.38
LMX1B-204ENST00000561065 TBC1D4O60343 1298 aa17.4■□□□□ 0.38
LMX1B-204ENST00000561065 TBCAO75347 108 aaKnown RBP17.4■□□□□ 0.38
LMX1B-204ENST00000561065 CLTAP09496 248 aa17.4■□□□□ 0.38
LMX1B-204ENST00000561065 HOXA9P31269 272 aa17.4■□□□□ 0.38
LMX1B-204ENST00000561065 MATR3P43243 847 aaKnown RBP eCLIP17.4■□□□□ 0.38
LMX1B-204ENST00000561065 GTF2BQ00403 316 aa17.4■□□□□ 0.38
LMX1B-204ENST00000561065 ROR1Q01973 937 aa17.4■□□□□ 0.38
LMX1B-204ENST00000561065 TCF15Q12870 199 aa17.4■□□□□ 0.38
LMX1B-204ENST00000561065 ENOX2Q16206 610 aaKnown RBP17.4■□□□□ 0.38
LMX1B-204ENST00000561065 ZC2HC1CQ53FD0 456 aaPredicted RBP17.4■□□□□ 0.38
LMX1B-204ENST00000561065 PPM1LQ5SGD2 360 aa17.4■□□□□ 0.38
LMX1B-204ENST00000561065 ANKS3Q6ZW76 656 aa17.4■□□□□ 0.38
LMX1B-204ENST00000561065 GRASPQ7Z6J2 395 aaPredicted RBP17.4■□□□□ 0.38
LMX1B-204ENST00000561065 SFR1Q86XK3 245 aa17.4■□□□□ 0.38
LMX1B-204ENST00000561065 ST13P5Q8NFI4 369 aaPredicted RBP17.4■□□□□ 0.38
LMX1B-204ENST00000561065 STAMQ92783 540 aa17.4■□□□□ 0.38
LMX1B-204ENST00000561065 STK17AQ9UEE5 414 aa17.4■□□□□ 0.38
LMX1B-204ENST00000561065 COL4A3Q01955 1670 aa17.4■□□□□ 0.38
LMX1B-204ENST00000561065 PIEZO1Q92508 2521 aa17.4■□□□□ 0.38
LMX1B-204ENST00000561065 SCN1AP35498 2009 aa17.39■□□□□ 0.38
LMX1B-204ENST00000561065 CACNA1HO95180 2353 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 A0A0B4J269 797 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 MYMKA6NI61 221 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 ANKRD63C9JTQ0 380 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 PPEF2O14830 753 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 TRAPPC3O43617 180 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 PPP1R37O75864 691 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 HNRNPA1P09651 372 aaKnown RBP eCLIP17.39■□□□□ 0.37
LMX1B-204ENST00000561065 ZSCAN22P10073 491 aaPredicted RBP17.39■□□□□ 0.37
LMX1B-204ENST00000561065 AVPR2P30518 371 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 RPL9P32969 192 aaKnown RBP17.39■□□□□ 0.37
LMX1B-204ENST00000561065 TDGQ13569 410 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 MRPL58Q14197 206 aaKnown RBP17.39■□□□□ 0.37
LMX1B-204ENST00000561065 ZBTB6Q15916 424 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 AXDND1Q5T1B0 1012 aaPredicted RBP17.39■□□□□ 0.37
LMX1B-204ENST00000561065 RRAGBQ5VZM2 374 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 CWF19L1Q69YN2 538 aaKnown RBP17.39■□□□□ 0.37
LMX1B-204ENST00000561065 SLC8B1Q6J4K2 584 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 CCDC73Q6ZRK6 1079 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 DYMQ7RTS9 669 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 DNAJC19Q96DA6 116 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 SUSD3Q96L08 255 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 LRRC27Q9C0I9 530 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 HCFC1R1Q9NWW0 138 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 ATP6V1DQ9Y5K8 247 aa17.39■□□□□ 0.37
LMX1B-204ENST00000561065 LACTBL1A8MY62 500 aa17.38■□□□□ 0.37
LMX1B-204ENST00000561065 SYN3O14994 580 aa17.38■□□□□ 0.37
LMX1B-204ENST00000561065 OGTO15294 1046 aa17.38■□□□□ 0.37
LMX1B-204ENST00000561065 PPP6R2O75170 966 aa17.38■□□□□ 0.37
LMX1B-204ENST00000561065 ADRB2P07550 413 aa17.38■□□□□ 0.37
LMX1B-204ENST00000561065 POU2F2P09086 479 aa17.38■□□□□ 0.37
LMX1B-204ENST00000561065 LAMP2P13473 410 aa17.38■□□□□ 0.37
LMX1B-204ENST00000561065 LRPAP1P30533 357 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms