RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 FGF14Q92915 247 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 ZNF396Q96N95 335 aaPredicted RBP11.77□□□□□ -0.53
TPM1-227ENST00000560970 CLSTN3Q9BQT9 956 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 KIFC3Q9BVG8 833 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 FOXQ1Q9C009 403 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 CCSER1Q9C0I3 900 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 SNTG2Q9NY99 539 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 DLGAP2Q9P1A6 1054 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 DAXXQ9UER7 740 aaPredicted RBP11.77□□□□□ -0.53
TPM1-227ENST00000560970 SIT1Q9Y3P8 196 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 R4GN57 208 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 PHLPP2Q6ZVD8 1323 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 DENND4CQ5VZ89 1909 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 NPHP3-ACAD11A0A0J9YXS1 232 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 TTLL13PA6NNM8 815 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 SPTLC2O15270 562 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 CCL16O15467 120 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 SLC26A4O43511 780 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 HIP1RO75146 1068 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 YEATS4O95619 227 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 PLA2G4BP0C869 781 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 PDIA4P13667 645 aaKnown RBP11.76□□□□□ -0.53
TPM1-227ENST00000560970 DDIT3P35638 169 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 UBA7P41226 1012 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 NTHL1P78549 312 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 MCM6Q14566 821 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 PARM1Q6UWI2 310 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 APBB1IPQ7Z5R6 666 aaPredicted RBP11.76□□□□□ -0.53
TPM1-227ENST00000560970 SYT2Q8N9I0 419 aaPredicted RBP11.76□□□□□ -0.53
TPM1-227ENST00000560970 KRI1Q8N9T8 703 aaKnown RBP11.76□□□□□ -0.53
TPM1-227ENST00000560970 KCNG4Q8TDN1 519 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 FGF13Q92913 245 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 SHDQ96IW2 340 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 CDK5RAP3Q96JB5 506 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 MTRRQ9UBK8 725 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 POLIQ9UNA4 740 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 GDAQ9Y2T3 454 aa11.76□□□□□ -0.53
TPM1-227ENST00000560970 EP300Q09472 2414 aaPredicted RBP11.75□□□□□ -0.53
TPM1-227ENST00000560970 ACKR2O00590 384 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 ADAM12O43184 909 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 PPP6R2O75170 966 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 SP9P0CG40 484 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 LIG1P18858 919 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 FGFR3P22607 806 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 EFNA5P52803 228 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 STARD6P59095 220 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 PFKPQ01813 784 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 CACNB1Q02641 598 aaPredicted RBP11.75□□□□□ -0.53
TPM1-227ENST00000560970 RAD51AP2Q09MP3 1159 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 RAB33AQ14088 237 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 MLF2Q15773 248 aaPredicted RBP11.75□□□□□ -0.53
TPM1-227ENST00000560970 PABPC1LQ4VXU2 614 aaKnown RBP11.75□□□□□ -0.53
TPM1-227ENST00000560970 ARSHQ5FYA8 562 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 GLRA4Q5JXX5 417 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 EEF1DP3Q658K8 133 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 C1orf210Q8IVY1 113 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 NPAS3Q8IXF0 933 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 RAD54LQ92698 747 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 CALML4Q96GE6 196 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 DDX27Q96GQ7 796 aaKnown RBP11.75□□□□□ -0.53
TPM1-227ENST00000560970 UROC1Q96N76 676 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 PPP1R10Q96QC0 940 aaKnown RBP11.75□□□□□ -0.53
TPM1-227ENST00000560970 HINFPQ9BQA5 517 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 CXCL16Q9H2A7 254 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 KCNH3Q9ULD8 1083 aa11.75□□□□□ -0.53
TPM1-227ENST00000560970 CEP250Q9BV73 2442 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 B3GAT3O94766 335 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 GLULP15104 373 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 GUCY2CP25092 1073 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 PRKCQQ04759 706 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 DHX8Q14562 1220 aaKnown RBP11.74□□□□□ -0.53
TPM1-227ENST00000560970 AXDND1Q5T1B0 1012 aaPredicted RBP11.74□□□□□ -0.53
TPM1-227ENST00000560970 ATF7IP2Q5U623 682 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 SHC4Q6S5L8 630 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 ANKS3Q6ZW76 656 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 RTL10Q7L3V2 364 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 GPBP1Q86WP2 473 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 KCTD17Q8N5Z5 321 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 ST13P5Q8NFI4 369 aaPredicted RBP11.74□□□□□ -0.53
TPM1-227ENST00000560970 RASSF8Q8NHQ8 419 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 ITFG1Q8TB96 612 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 LARP4BQ92615 738 aaKnown RBP11.74□□□□□ -0.53
TPM1-227ENST00000560970 KIFAP3Q92845 792 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 IFT74Q96LB3 600 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 KXD1Q9BQD3 176 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 DDX23Q9BUQ8 820 aaKnown RBP11.74□□□□□ -0.53
TPM1-227ENST00000560970 BCO2Q9BYV7 579 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 HCFC1R1Q9NWW0 138 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 USP20Q9Y2K6 914 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 CDY1Q9Y6F8 540 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 KIAA1549LQ6ZVL6 1849 aa11.74□□□□□ -0.53
TPM1-227ENST00000560970 KANSL1LA0AUZ9 987 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 SFI1A8K8P3 1242 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 SPTLC1O15269 473 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 TRAPPC3O43617 180 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 TKTP29401 623 aaKnown RBP11.73□□□□□ -0.53
TPM1-227ENST00000560970 OR1D2P34982 312 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 MAGEA9P43362 315 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 NPTX2P47972 431 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 CLCNKBP51801 687 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms