RNA–Protein interactions for RNA: ENST00000560502.5

LDLR-213, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 509 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-213ENST00000560502 NAB2Q15742 525 aa15.34■□□□□ 0.05
LDLR-213ENST00000560502 RRAGBQ5VZM2 374 aa15.34■□□□□ 0.05
LDLR-213ENST00000560502 PHLDB3Q6NSJ2 640 aa15.34■□□□□ 0.05
LDLR-213ENST00000560502 PRSS55Q6UWB4 352 aaPredicted RBP15.34■□□□□ 0.05
LDLR-213ENST00000560502 USP49Q70CQ1 688 aa15.34■□□□□ 0.05
LDLR-213ENST00000560502 GET4Q7L5D6 327 aaPredicted RBP15.34■□□□□ 0.05
LDLR-213ENST00000560502 GLYCTKQ8IVS8 523 aa15.34■□□□□ 0.05
LDLR-213ENST00000560502 ADSSL1Q8N142 457 aa15.34■□□□□ 0.05
LDLR-213ENST00000560502 GPR152Q8TDT2 470 aa15.34■□□□□ 0.05
LDLR-213ENST00000560502 PIK3R5Q8WYR1 880 aa15.34■□□□□ 0.05
LDLR-213ENST00000560502 CCDC43Q96MW1 224 aaKnown RBP15.34■□□□□ 0.05
LDLR-213ENST00000560502 BPIFA3Q9BQP9 254 aa15.34■□□□□ 0.05
LDLR-213ENST00000560502 PDZD7Q9H5P4 517 aa15.34■□□□□ 0.05
LDLR-213ENST00000560502 SLC2A4RGQ9NR83 387 aa15.34■□□□□ 0.05
LDLR-213ENST00000560502 DLGAP2Q9P1A6 1054 aa15.34■□□□□ 0.05
LDLR-213ENST00000560502 LRWD1Q9UFC0 647 aa15.34■□□□□ 0.05
LDLR-213ENST00000560502 PARP2Q9UGN5 583 aa15.34■□□□□ 0.05
LDLR-213ENST00000560502 SERTAD1Q9UHV2 236 aa15.34■□□□□ 0.05
LDLR-213ENST00000560502 CA14Q9ULX7 337 aa15.34■□□□□ 0.05
LDLR-213ENST00000560502 PATJQ8NI35 1801 aa15.33■□□□□ 0.05
LDLR-213ENST00000560502 WDR87Q6ZQQ6 2873 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 LRRIQ4A6NIV6 560 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 TADA2AO75478 443 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 KIF4AO95239 1232 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 NLRP12P59046 1061 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 CT47A1Q5JQC4 288 aaPredicted RBP15.33■□□□□ 0.04
LDLR-213ENST00000560502 KRT79Q5XKE5 535 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 HAUS3Q68CZ6 603 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 PDILTQ8N807 584 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 MCPH1Q8NEM0 835 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 RASSF8Q8NHQ8 419 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 ERMNQ8TAM6 284 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 SPATA20Q8TB22 786 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 LNX1Q8TBB1 728 aaPredicted RBP15.33■□□□□ 0.04
LDLR-213ENST00000560502 BSNDQ8WZ55 320 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 SMARCE1Q969G3 411 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 GSDMAQ96QA5 445 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 CLSTN3Q9BQT9 956 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 CXCL16Q9H2A7 254 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 TUFT1Q9NNX1 390 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 ARHGEF3Q9NR81 526 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 DACH1Q9UI36 760 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 ZFP37Q9Y6Q3 630 aaPredicted RBP15.33■□□□□ 0.04
LDLR-213ENST00000560502 NUMBLQ9Y6R0 609 aa15.33■□□□□ 0.04
LDLR-213ENST00000560502 COL4A3Q01955 1670 aa15.32■□□□□ 0.04
LDLR-213ENST00000560502 CEP250Q9BV73 2442 aa15.32■□□□□ 0.04
LDLR-213ENST00000560502 A0A087X0B3 334 aa15.32■□□□□ 0.04
LDLR-213ENST00000560502 CASTOR2A6NHX0 329 aa15.32■□□□□ 0.04
LDLR-213ENST00000560502 MED24O75448 989 aa15.32■□□□□ 0.04
LDLR-213ENST00000560502 RECQL4O94761 1208 aa15.32■□□□□ 0.04
LDLR-213ENST00000560502 EDN1P05305 212 aa15.32■□□□□ 0.04
LDLR-213ENST00000560502 HNRNPA1P09651 372 aaKnown RBP eCLIP15.32■□□□□ 0.04
LDLR-213ENST00000560502 ANO6Q4KMQ2 910 aa15.32■□□□□ 0.04
LDLR-213ENST00000560502 HYIQ5T013 277 aa15.32■□□□□ 0.04
LDLR-213ENST00000560502 CATSPER3Q86XQ3 398 aa15.32■□□□□ 0.04
LDLR-213ENST00000560502 TTPALQ9BTX7 342 aa15.32■□□□□ 0.04
LDLR-213ENST00000560502 LRRC27Q9C0I9 530 aa15.32■□□□□ 0.04
LDLR-213ENST00000560502 CCDC113Q9H0I3 377 aa15.32■□□□□ 0.04
LDLR-213ENST00000560502 RMND1Q9NWS8 449 aa15.32■□□□□ 0.04
LDLR-213ENST00000560502 N4BP3O15049 544 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 POU2F2P09086 479 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 FSHRP23945 695 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 HOXA9P31269 272 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 ZNF165P49910 485 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 AMPD3Q01432 767 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 PSMD5Q16401 504 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 FAM171A1Q5VUB5 890 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 MAEAQ7L5Y9 396 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 ZBTB8OSQ8IWT0 167 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 HASPINQ8TF76 798 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 PAGE5Q96GU1 130 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 CDK5RAP3Q96JB5 506 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 POLR3CQ9BUI4 534 aaPredicted RBP15.31■□□□□ 0.04
LDLR-213ENST00000560502 C2orf40Q9H1Z8 148 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 SEMA4AQ9H3S1 761 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 SNTG2Q9NY99 539 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 CDH7Q9ULB5 785 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 PCDHA5Q9Y5H7 936 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 DCHS1Q96JQ0 3298 aa15.31■□□□□ 0.04
LDLR-213ENST00000560502 STK25O00506 426 aa15.3■□□□□ 0.04
LDLR-213ENST00000560502 ACKR2O00590 384 aa15.3■□□□□ 0.04
LDLR-213ENST00000560502 ADAM12O43184 909 aa15.3■□□□□ 0.04
LDLR-213ENST00000560502 THP07101 528 aa15.3■□□□□ 0.04
LDLR-213ENST00000560502 C8AP07357 584 aa15.3■□□□□ 0.04
LDLR-213ENST00000560502 CYP11B2P19099 503 aa15.3■□□□□ 0.04
LDLR-213ENST00000560502 MUTP22033 750 aa15.3■□□□□ 0.04
LDLR-213ENST00000560502 RFX1P22670 979 aa15.3■□□□□ 0.04
LDLR-213ENST00000560502 NTHL1P78549 312 aa15.3■□□□□ 0.04
LDLR-213ENST00000560502 PNOCQ13519 176 aa15.3■□□□□ 0.04
LDLR-213ENST00000560502 KARSQ15046 597 aaKnown RBP15.3■□□□□ 0.04
LDLR-213ENST00000560502 TMEM119Q4V9L6 283 aa15.3■□□□□ 0.04
LDLR-213ENST00000560502 LIN9Q5TKA1 542 aa15.3■□□□□ 0.04
LDLR-213ENST00000560502 EEF1DP3Q658K8 133 aa15.3■□□□□ 0.04
LDLR-213ENST00000560502 DCLRE1AQ6PJP8 1040 aa15.3■□□□□ 0.04
LDLR-213ENST00000560502 GPR179Q6PRD1 2367 aa15.3■□□□□ 0.04
LDLR-213ENST00000560502 PARM1Q6UWI2 310 aa15.3■□□□□ 0.04
LDLR-213ENST00000560502 GRASPQ7Z6J2 395 aaPredicted RBP15.3■□□□□ 0.04
LDLR-213ENST00000560502 MLKLQ8NB16 471 aa15.3■□□□□ 0.04
LDLR-213ENST00000560502 SNX29Q8TEQ0 813 aa15.3■□□□□ 0.04
LDLR-213ENST00000560502 FGF14Q92915 247 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms