RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 FUT10Q6P4F1 479 aa15.16■□□□□ 0.02
PKNOX1-209ENST00000560448 TMEM173Q86WV6 379 aaPredicted RBP15.16■□□□□ 0.02
PKNOX1-209ENST00000560448 VPS52Q8N1B4 723 aa15.16■□□□□ 0.02
PKNOX1-209ENST00000560448 MICAL1Q8TDZ2 1067 aa15.16■□□□□ 0.02
PKNOX1-209ENST00000560448 SAAL1Q96ER3 474 aa15.16■□□□□ 0.02
PKNOX1-209ENST00000560448 ZBP1Q9H171 429 aa15.16■□□□□ 0.02
PKNOX1-209ENST00000560448 ENTPD7Q9NQZ7 604 aa15.16■□□□□ 0.02
PKNOX1-209ENST00000560448 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.16■□□□□ 0.02
PKNOX1-209ENST00000560448 KIAA1468Q9P260 1216 aa15.16■□□□□ 0.02
PKNOX1-209ENST00000560448 FRMD4BQ9Y2L6 1034 aa15.16■□□□□ 0.02
PKNOX1-209ENST00000560448 PODXLO00592 558 aa15.15■□□□□ 0.02
PKNOX1-209ENST00000560448 MEFVO15553 781 aaPredicted RBP15.15■□□□□ 0.02
PKNOX1-209ENST00000560448 EXOC3O60645 756 aa15.15■□□□□ 0.02
PKNOX1-209ENST00000560448 URODP06132 367 aa15.15■□□□□ 0.02
PKNOX1-209ENST00000560448 SRGAP2BP0DMP2 458 aa15.15■□□□□ 0.02
PKNOX1-209ENST00000560448 CLCNKBP51801 687 aa15.15■□□□□ 0.02
PKNOX1-209ENST00000560448 AP3M2P53677 418 aa15.15■□□□□ 0.02
PKNOX1-209ENST00000560448 LRRC63Q05C16 580 aa15.15■□□□□ 0.02
PKNOX1-209ENST00000560448 CAMK4Q16566 473 aa15.15■□□□□ 0.02
PKNOX1-209ENST00000560448 JADE1Q6IE81 842 aa15.15■□□□□ 0.02
PKNOX1-209ENST00000560448 MRPL43Q8N983 215 aaKnown RBP15.15■□□□□ 0.02
PKNOX1-209ENST00000560448 FAM212AQ96EL1 285 aa15.15■□□□□ 0.02
PKNOX1-209ENST00000560448 DHTKD1Q96HY7 919 aaPredicted RBP15.15■□□□□ 0.02
PKNOX1-209ENST00000560448 TSG101Q99816 390 aa15.15■□□□□ 0.02
PKNOX1-209ENST00000560448 MRPL17Q9NRX2 175 aaKnown RBP15.15■□□□□ 0.02
PKNOX1-209ENST00000560448 CHST7Q9NS84 486 aa15.15■□□□□ 0.02
PKNOX1-209ENST00000560448 DMAC2Q9NW81 257 aa15.15■□□□□ 0.02
PKNOX1-209ENST00000560448 COG5Q9UP83 839 aa15.15■□□□□ 0.02
PKNOX1-209ENST00000560448 SYN3O14994 580 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 KIF4AO95239 1232 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 NR3C1P04150 777 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 DNAJB1P25685 340 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 PNPLA4P41247 253 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 GLUD2P49448 558 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 SOX4Q06945 474 aaPredicted RBP15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 COL19A1Q14993 1142 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 PSMD6Q15008 389 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 CENPPQ6IPU0 288 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 KIAA1841Q6NSI8 718 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 PPFIBP1Q86W92 1011 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 WDR49Q8IV35 697 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 FNBP1Q96RU3 617 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 MKNK1Q9BUB5 465 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 EMILIN2Q9BXX0 1053 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 OXCT2Q9BYC2 517 aaPredicted RBP15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 IKZF4Q9H2S9 585 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 PCIF1Q9H4Z3 704 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 MAN1B1Q9UKM7 699 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 NUB1Q9Y5A7 615 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 TRANK1O15050 2925 aa15.14■□□□□ 0.01
PKNOX1-209ENST00000560448 ANK1P16157 1881 aa15.13■□□□□ 0.01
PKNOX1-209ENST00000560448 PRRC2BQ5JSZ5 2229 aaKnown RBP15.13■□□□□ 0.01
PKNOX1-209ENST00000560448 BICDL2A1A5D9 508 aa15.13■□□□□ 0.01
PKNOX1-209ENST00000560448 NR2F2P24468 414 aa15.13■□□□□ 0.01
PKNOX1-209ENST00000560448 PRCPP42785 496 aa15.13■□□□□ 0.01
PKNOX1-209ENST00000560448 ERVFC1P60507 584 aa15.13■□□□□ 0.01
PKNOX1-209ENST00000560448 DSG1Q02413 1049 aa15.13■□□□□ 0.01
PKNOX1-209ENST00000560448 MORC3Q14149 939 aa15.13■□□□□ 0.01
PKNOX1-209ENST00000560448 ZCWPW2Q504Y3 356 aa15.13■□□□□ 0.01
PKNOX1-209ENST00000560448 CBWD2Q8IUF1 395 aa15.13■□□□□ 0.01
PKNOX1-209ENST00000560448 ADSSL1Q8N142 457 aa15.13■□□□□ 0.01
PKNOX1-209ENST00000560448 BCL7CQ8WUZ0 217 aaPredicted RBP15.13■□□□□ 0.01
PKNOX1-209ENST00000560448 ANKRD36BP1Q96IX9 119 aa15.13■□□□□ 0.01
PKNOX1-209ENST00000560448 MFSD14AQ96MC6 490 aa15.13■□□□□ 0.01
PKNOX1-209ENST00000560448 ZNF560Q96MR9 790 aa15.13■□□□□ 0.01
PKNOX1-209ENST00000560448 CXCL16Q9H2A7 254 aa15.13■□□□□ 0.01
PKNOX1-209ENST00000560448 DPP7Q9UHL4 492 aa15.13■□□□□ 0.01
PKNOX1-209ENST00000560448 ITGA11Q9UKX5 1188 aa15.13■□□□□ 0.01
PKNOX1-209ENST00000560448 ANO9A1A5B4 782 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 GOLGA8IPA6NC78 632 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 C2orf71A6NGG8 1288 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 GOLGA8JA6NMD2 632 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 CLIC2O15247 247 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 TNNC2P02585 160 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 NFICP08651 508 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 TMEM191BP0C7N4 346 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 CYP2J2P51589 502 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 FKBP3Q00688 224 aaKnown RBP15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 CYP24A1Q07973 514 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 DUOXA2Q1HG44 320 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 UVSSAQ2YD98 709 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 TCEAL5Q5H9L2 206 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 ELMSAN1Q6PJG2 1045 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 INTS8Q75QN2 995 aaKnown RBP15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 APPL2Q8NEU8 664 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 C18orf25Q96B23 403 aaPredicted RBP15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 PABPC5Q96DU9 382 aaKnown RBP15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 PAAF1Q9BRP4 392 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 TTPALQ9BTX7 342 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 GOLGA2P5Q9HBQ8 144 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 DPP3Q9NY33 737 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 FNIP2Q9P278 1114 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 TUBGCP4Q9UGJ1 667 aa15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 R3HCC1Q9Y3T6 440 aaKnown RBP15.12■□□□□ 0.01
PKNOX1-209ENST00000560448 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.11■□□□□ 0.01
PKNOX1-209ENST00000560448 PIRO00625 290 aa15.11■□□□□ 0.01
PKNOX1-209ENST00000560448 IKBKBO14920 756 aa15.11■□□□□ 0.01
PKNOX1-209ENST00000560448 CETN3O15182 167 aa15.11■□□□□ 0.01
PKNOX1-209ENST00000560448 CXCL14O95715 111 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms