RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 KCTD19Q17RG1 926 aaPredicted RBP11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 DUOXA2Q1HG44 320 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 H2AFVQ71UI9 128 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 WDR49Q8IV35 697 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 PASD1Q8IV76 773 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 TRIM58Q8NG06 486 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 COG1Q8WTW3 980 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 WNT8BQ93098 351 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 NXF1Q9UBU9 619 aaKnown RBP11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 NOCTQ9UK39 431 aaKnown RBP11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 NENFQ9UMX5 172 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 SAR1BQ9Y6B6 198 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 ANK1P16157 1881 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 MBLAC1A4D2B0 266 aaPredicted RBP11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 FTLP02792 175 aaPredicted RBP11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 CTSHP09668 335 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 CCDC172P0C7W6 258 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 IBSPP21815 317 aaPredicted RBP11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 RAP1GAPP47736 663 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 FMO1Q01740 532 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 ORC1Q13415 861 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 CUL2Q13617 745 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 NBPF20Q3BBV1 942 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 SLC10A6Q3KNW5 377 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 LUC7LQ9NQ29 371 aaKnown RBP11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 SNTG2Q9NY99 539 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 PCDHB4Q9Y5E5 795 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 A0A1B0GUA9 196 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 GRID2IPA4D2P6 1211 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 ITGB3P05106 788 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 RARBP10826 455 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 AKAP5P24588 427 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 PDE6CP51160 858 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 GCNT1Q02742 428 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 POU5F1BQ06416 359 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 TRPC3Q13507 836 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 FAM187BQ17R55 369 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 GLRA4Q5JXX5 417 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 LLGL2Q6P1M3 1020 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 SLC35G2Q8TBE7 412 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 ALS2CR12Q96Q35 445 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 MMS19Q96T76 1030 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 HINFPQ9BQA5 517 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 GCOM2Q9BZD3 368 aaPredicted RBP11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 XPNPEP3Q9NQH7 507 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 POLIQ9UNA4 740 aa11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 LAMA2P24043 3122 aaKnown RBP11.68□□□□□ -0.54
SNRPA1-211ENST00000560433 SMIM35A0A1B0GVV1 85 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 TADA3O75528 432 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 CLTAP09496 248 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 VEGFBP49765 207 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 CDH8P55286 799 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 GDF6Q6KF10 455 aaPredicted RBP11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 IFNLR1Q8IU57 520 aaPredicted RBP11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 C1orf127Q8N9H9 656 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 CPA5Q8WXQ8 436 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 MS4A14Q96JA4 679 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 TLR10Q9BXR5 811 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 OSBPL7Q9BZF2 842 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 CREBZFQ9NS37 354 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 KLK14Q9P0G3 267 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 PIN4Q9Y237 131 aaKnown RBP11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 JRKLQ9Y4A0 524 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 PDE2AO00408 941 aaPredicted RBP11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 SEPT4O43236 478 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 ASGR1P07306 291 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 ACO1P21399 889 aaKnown RBP11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 EIF4BP23588 611 aaKnown RBP11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 GJA9P57773 515 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 MRPS25P82663 173 aaKnown RBP11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 SNX17Q15036 470 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 KCNA10Q16322 511 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 PAPD7Q5XG87 772 aaKnown RBP11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 SRGAP1Q7Z6B7 1085 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 ZNF410Q86VK4 478 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 DDX1Q92499 740 aaKnown RBP11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 UBXN4Q92575 508 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 ANKRD36BP1Q96IX9 119 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 ADPGKQ9BRR6 497 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 IMPG2Q9BZV3 1241 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 NXF3Q9H4D5 531 aaKnown RBP11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 SIX4Q9UIU6 781 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 COG5Q9UP83 839 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 Q9Y3F1 56 aa11.67□□□□□ -0.54
SNRPA1-211ENST00000560433 ASS1P00966 412 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 TNNC2P02585 160 aa11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 MCF2P10911 925 aa11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 DARSP14868 501 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 APLP1P51693 650 aa11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 ZNF699Q32M78 642 aa11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 WDR72Q3MJ13 1102 aa11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 CTNNBL1Q8WYA6 563 aaPredicted RBP11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 VTI1AQ96AJ9 217 aa11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 BTBD6Q96KE9 485 aa11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 ACAP3Q96P50 834 aa11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 RNF39Q9H2S5 420 aa11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 B4GALT4O60513 344 aa11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 ZC3H11AO75152 810 aaKnown RBP eCLIP11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 CDR1P51861 262 aa11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 C10orf76Q5T2E6 689 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms