RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 GPR65Q8IYL9 337 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 ZSWIM2Q8NEG5 633 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 LEO1Q8WVC0 666 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 DDX27Q96GQ7 796 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 TRIM9Q9C026 710 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 TNMDQ9H2S6 317 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 SFXN1Q9H9B4 322 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 PLEKHA5Q9HAU0 1116 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 TSHZ2Q9NRE2 1034 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 OLFML3Q9NRN5 406 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 CPSF3Q9UKF6 684 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 CFAP45Q9UL16 551 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 STYXL1Q9Y6J8 313 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 DENND4AQ7Z401 1863 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 SPDYE4A6NLX3 237 aa12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 PPEF2O14830 753 aa12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 PRPF6O94906 941 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 ADRB2P07550 413 aa12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 MTHFRP42898 656 aa12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 PPP2R3AQ06190 1150 aa12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 ELAVL2Q12926 359 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 ATAT1Q5SQI0 421 aa12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 L1TD1Q5T7N2 865 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 ADALQ6DHV7 355 aa12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 CRELD2Q6UXH1 353 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 GPR149Q86SP6 731 aa12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 GRAMD1CQ8IYS0 662 aa12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 IQUBQ8NA54 791 aa12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 HVCN1Q96D96 273 aa12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 FAM212AQ96EL1 285 aa12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 KIF12Q96FN5 646 aa12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 RIPOR3Q96MK2 946 aa12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 RPF1Q9H9Y2 349 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 AGO2Q9UKV8 859 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-216ENST00000560243 TECTAO75443 2155 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 CCDC195A0A1B0GUA6 201 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 C2CD4DB7Z1M9 353 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 DCXO43602 365 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 NFICP08651 508 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 RPL9P32969 192 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 ABCD1P33897 745 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 OR1D2P34982 312 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 HOXD13P35453 343 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 WNT7BP56706 349 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 KYAT1Q16773 422 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 JADE1Q6IE81 842 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 CCDC65Q8IXS2 484 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 KREMEN2Q8NCW0 462 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 POMGNT1Q8WZA1 660 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 ZNF707Q96C28 371 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 NECTIN4Q96NY8 510 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 ACCSQ96QU6 501 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 BLZF1Q9H2G9 400 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 CUEDC2Q9H467 287 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 MTRRQ9UBK8 725 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 KCNH3Q9ULD8 1083 aa12.67□□□□□ -0.38
RABGGTA-216ENST00000560243 SCN1AP35498 2009 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 A0A1B0GVL5 298 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 TRAPPC3O43617 180 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 LRPAP1P30533 357 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 AFMP43652 599 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 ASIC1P78348 528 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 CREMQ03060 361 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 VARS2Q5ST30 1063 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 SLFN12LQ6IEE8 588 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 CNNM4Q6P4Q7 775 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 CMASQ8NFW8 434 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 SAAL1Q96ER3 474 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 FAM84AQ96KN4 292 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 SUSD3Q96L08 255 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 SPATA32Q96LK8 384 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 C7orf25Q9BPX7 421 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 CBWD1Q9BRT8 395 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 FAM213AQ9BRX8 229 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 C1QTNF1Q9BXJ1 281 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 FAM13BQ9NYF5 915 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 SERTAD1Q9UHV2 236 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 RAPGEFL1Q9UHV5 662 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 FBXW11Q9UKB1 542 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 UBQLN1Q9UMX0 589 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 NUB1Q9Y5A7 615 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 PCDHB13Q9Y5F0 798 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 CDY1Q9Y6F8 540 aa12.66□□□□□ -0.38
RABGGTA-216ENST00000560243 DOCK8Q8NF50 2099 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 GOLGA8IPA6NC78 632 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 GOLGA8JA6NMD2 632 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 ACTN4O43707 911 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 TBC1D4O60343 1298 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 ALADP13716 330 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 PFKFB1P16118 471 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 MCM4P33991 863 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 KRT85P78386 507 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 AMPD3Q01432 767 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 CUL4BQ13620 913 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 RAB33AQ14088 237 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 SPATA1Q5VX52 437 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 PDXDC1Q6P996 788 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms