RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 CEP135Q66GS9 1140 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 ANKRD40Q6AI12 368 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 JADE1Q6IE81 842 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 FILIP1Q7Z7B0 1213 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 CBWD2Q8IUF1 395 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 FAM114A1Q8IWE2 563 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 FAM186BQ8IYM0 893 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 SMYD4Q8IYR2 804 aaPredicted RBP13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 LRRC52Q8N7C0 313 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 SPPL3Q8TCT6 385 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 ZMAT2Q96NC0 199 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 TLR9Q9NR96 1032 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 INTS13Q9NVM9 706 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 MTMR10Q9NXD2 777 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 DPP3Q9NY33 737 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 DNAJB4Q9UDY4 337 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 NUB1Q9Y5A7 615 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 GOLGA8IPA6NC78 632 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 GOLGA8JA6NMD2 632 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 PODXLO00592 558 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 SYN3O14994 580 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 SOD2P04179 222 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 ITGB1P05556 798 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 CCDC192P0DO97 292 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 BMP6P22004 513 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 AFF1P51825 1210 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 RBP5P82980 135 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 TFAMQ00059 246 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 MYO1EQ12965 1108 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 SMC1AQ14683 1233 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 GRIN2CQ14957 1233 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 STX1AQ16623 288 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 TPD52L1Q16890 204 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 SV2CQ496J9 727 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 GLRA4Q5JXX5 417 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 ZBTB41Q5SVQ8 909 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 ISM2Q6H9L7 571 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 KIAA1841Q6NSI8 718 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 TTI2Q6NXR4 508 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 ELMSAN1Q6PJG2 1045 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 FRMD5Q7Z6J6 570 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 CSGALNACT2Q8N6G5 542 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 RDH13Q8NBN7 331 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 APPL2Q8NEU8 664 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 SPATA18Q8TC71 538 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 PARD3BQ8TEW8 1205 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 POF1BQ8WVV4 589 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 CDCA3Q99618 268 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 CGRRF1Q99675 332 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 PDE11AQ9HCR9 933 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 ARMCX3Q9UH62 379 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 DPP7Q9UHL4 492 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 DSEQ9UL01 958 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 MTUS1Q9ULD2 1270 aa13.03□□□□□ -0.32
RABGGTA-215ENST00000560207 MTCL1Q9Y4B5 1905 aaKnown RBP13.02□□□□□ -0.32
RABGGTA-215ENST00000560207 ANO9A1A5B4 782 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 CASTOR2A6NHX0 329 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 PIRO00625 290 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 URODP06132 367 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 FAM163BP0C2L3 166 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 CTSAP10619 480 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 ATICP31939 592 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 TAF6P49848 677 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 CLCNKBP51801 687 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 VAMP7P51809 220 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 MARSP56192 900 aaKnown RBP13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 CETN1Q12798 172 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 BFSP1Q12934 665 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 KLHL10Q6JEL2 608 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 CAVIN1Q6NZI2 390 aaKnown RBP13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 FUT10Q6P4F1 479 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 PPFIBP1Q86W92 1011 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 TAF4BQ92750 862 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 FAXDC2Q96IV6 333 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 HERC2P3Q9BVR0 1158 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 IKZF4Q9H2S9 585 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 PRDM12Q9H4Q4 367 aa13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 MRPL17Q9NRX2 175 aaKnown RBP13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 PRG3Q9Y2Y8 225 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-215ENST00000560207 LAMA3Q16787 3333 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 SCN1AP35498 2009 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 N4BP1O75113 896 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 AKAP3O75969 853 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 ARHGEF15O94989 841 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 STAU1O95793 577 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 EFEMP2O95967 443 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 NFICP08651 508 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 SRGAP2BP0DMP2 458 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 DLATP10515 647 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 CD44P16070 742 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 GLUD2P49448 558 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 TRPC3Q13507 836 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 C9orf57Q5W0N0 161 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 SMYD5Q6GMV2 418 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 ANKS3Q6ZW76 656 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 DPH6Q7L8W6 267 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 TMC7Q7Z402 723 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 RNF168Q8IYW5 571 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms