RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 DLGAP2Q9P1A6 1054 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 SF3B1O75533 1304 aaKnown RBP eCLIP14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 FAM135BQ49AJ0 1406 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 PIK3CDO00329 1044 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 CYBBP04839 570 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 S100A1P23297 94 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 BTDP43251 543 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 SESN2P58004 480 aaPredicted RBP14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 TTC39BQ5VTQ0 682 aaPredicted RBP14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 TBCKQ8TEA7 893 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 CDY2AQ9Y6F7 541 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 CDY1Q9Y6F8 540 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 ZMYM4Q5VZL5 1548 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 DYRK3O43781 588 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 MFAP3LO75121 409 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 ATP6V1B1P15313 513 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 A0A1W2PRG6 482 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 DENND3A2RUS2 1198 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 PSTPIP1O43586 416 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 ATP9BO43861 1147 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 HOXB7P09629 217 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 PLCG1P19174 1290 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 PRIM2P49643 509 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 BTKQ06187 659 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 LRRC24Q50LG9 513 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 KCTD1Q719H9 257 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 ENKURQ8TC29 256 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 WNK4Q96J92 1243 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 SPACA6W5XKT8 324 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 PGK2P07205 417 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 GNA15P30679 374 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 YWHABP31946 246 aaKnown RBP14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 ADD1P35611 737 aaKnown RBP14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 ZCWPW2Q504Y3 356 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 MAP3K20Q9NYL2 800 aaKnown RBP14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 DNAJC12Q9UKB3 198 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 AATKQ6ZMQ8 1374 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 ZC3H4Q9UPT8 1303 aaKnown RBP14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 CLDN3O15551 220 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 JAK3P52333 1124 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 BCAR1P56945 870 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 SPASTQ9UBP0 616 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 KDM5AP29375 1690 aaKnown RBP14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 NFICP08651 508 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 DCTN2Q13561 401 aaKnown RBP14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 SLITRK2Q9H156 845 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 UBA2Q9UBT2 640 aaPredicted RBP14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 DAPK2Q9UIK4 370 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 EIF3HO15372 352 aaKnown RBP eCLIP14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 RMND5BQ96G75 393 aaPredicted RBP14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 APOL4Q9BPW4 351 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 ABHD10Q9NUJ1 306 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 TMA7Q9Y2S6 64 aaKnown RBP14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 RPN2P04844 631 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 MYL3P08590 195 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 TCN1P20061 433 aaPredicted RBP14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 MXD3Q9BW11 206 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 RGS18Q9NS28 235 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 PSMD12O00232 456 aaPredicted RBP14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 KCNN4O15554 427 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 AGTP01019 485 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 ARHGDIBP52566 201 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 UGT3A1Q6NUS8 523 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 VN1R5Q7Z5H4 357 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 ADGRF5Q8IZF2 1346 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 RAB2AP61019 212 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 CACNB1Q02641 598 aaPredicted RBP14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 VEPH1Q14D04 833 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 ZSWIM7Q19AV6 140 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 SYDE2Q5VT97 1194 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 CHSY1Q86X52 802 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 IZUMO1Q8IYV9 350 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 ZNF473Q8WTR7 871 aaKnown RBP14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 PPP1R16BQ96T49 567 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 PACSIN1Q9BY11 444 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 ARAP1Q96P48 1450 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 M0QYV0 167 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 PDIA3P30101 505 aaKnown RBP14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 PHKA2P46019 1235 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 EPS8Q12929 822 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 CDC73Q6P1J9 531 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 PTPRN2Q92932 1015 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 TRIM51Q9BSJ1 452 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 ZNF304Q9HCX3 659 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 ARHGEF11O15085 1522 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 POLR3AO14802 1390 aaPredicted RBP14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 AQRO60306 1485 aaKnown RBP eCLIP14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 PFASO15067 1338 aa14.5□□□□□ -0.09
CSPG4P12-202ENST00000559989 PTPN12Q05209 780 aaKnown RBP14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 THOC7Q6I9Y2 204 aaKnown RBP14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 C1orf131Q8NDD1 294 aaKnown RBP14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 SUCLG2Q96I99 432 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 TASP1Q9H6P5 420 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 ZBTB1Q9Y2K1 713 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 PCDHGA4Q9Y5G9 962 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 PNMA8CA0A1B0GUJ8 204 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 TRIM43BA6NCK2 446 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 TRPC5OSA6NMA1 111 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 A8MXQ7 604 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms