RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 VIPR2P41587 438 aa17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 SOX4Q06945 474 aaPredicted RBP17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 SIM2Q14190 667 aaPredicted RBP17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 CSRP2Q16527 193 aa17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 PDXDC1Q6P996 788 aa17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 MAMSTRQ6ZN01 415 aa17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 Q6ZS52 159 aa17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 RSPRY1Q96DX4 576 aa17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 PRIMPOLQ96LW4 560 aa17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 CCDC43Q96MW1 224 aaKnown RBP17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 PPP1R10Q96QC0 940 aaKnown RBP17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 CCDC113Q9H0I3 377 aa17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 RBM12Q9NTZ6 932 aaKnown RBP17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 PDRG1Q9NUG6 133 aa17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 PRMT7Q9NVM4 692 aaPredicted RBP17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 RAB23Q9ULC3 237 aa17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 BACE2Q9Y5Z0 518 aa17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 SPEGQ15772 3267 aa17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 NUP210Q8TEM1 1887 aaPredicted RBP17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 WDFY3Q8IZQ1 3526 aa17.22■□□□□ 0.35
AC243562.3-201ENST00000559866 STK36Q9NRP7 1315 aa17.21■□□□□ 0.35
AC243562.3-201ENST00000559866 K7ESF4 209 aa17.21■□□□□ 0.35
AC243562.3-201ENST00000559866 B3GAT3O94766 335 aa17.21■□□□□ 0.35
AC243562.3-201ENST00000559866 PRKCBP05771 671 aa17.21■□□□□ 0.35
AC243562.3-201ENST00000559866 PTPN2P17706 415 aa17.21■□□□□ 0.35
AC243562.3-201ENST00000559866 CCR3P51677 355 aa17.21■□□□□ 0.35
AC243562.3-201ENST00000559866 NRLP54845 237 aa17.21■□□□□ 0.35
AC243562.3-201ENST00000559866 UPP1Q16831 310 aa17.21■□□□□ 0.35
AC243562.3-201ENST00000559866 FAM187BQ17R55 369 aa17.21■□□□□ 0.35
AC243562.3-201ENST00000559866 SLFN12Q8IYM2 578 aa17.21■□□□□ 0.35
AC243562.3-201ENST00000559866 TRMT61BQ9BVS5 477 aaKnown RBP17.21■□□□□ 0.35
AC243562.3-201ENST00000559866 ZFP14Q9HCL3 533 aa17.21■□□□□ 0.35
AC243562.3-201ENST00000559866 RXFP3Q9NSD7 469 aa17.21■□□□□ 0.35
AC243562.3-201ENST00000559866 ASPMQ8IZT6 3477 aa17.2■□□□□ 0.34
AC243562.3-201ENST00000559866 MAN2B1O00754 1011 aa17.2■□□□□ 0.34
AC243562.3-201ENST00000559866 N4BP3O15049 544 aa17.2■□□□□ 0.34
AC243562.3-201ENST00000559866 LRP3O75074 770 aa17.2■□□□□ 0.34
AC243562.3-201ENST00000559866 ABLIM3O94929 683 aa17.2■□□□□ 0.34
AC243562.3-201ENST00000559866 LRG1P02750 347 aa17.2■□□□□ 0.34
AC243562.3-201ENST00000559866 LIG1P18858 919 aa17.2■□□□□ 0.34
AC243562.3-201ENST00000559866 CCNE1P24864 410 aa17.2■□□□□ 0.34
AC243562.3-201ENST00000559866 PMLP29590 882 aa17.2■□□□□ 0.34
AC243562.3-201ENST00000559866 SOX9P48436 509 aa17.2■□□□□ 0.34
AC243562.3-201ENST00000559866 NR5A1Q13285 461 aa17.2■□□□□ 0.34
AC243562.3-201ENST00000559866 CCDC6Q16204 474 aa17.2■□□□□ 0.34
AC243562.3-201ENST00000559866 SLC8B1Q6J4K2 584 aa17.2■□□□□ 0.34
AC243562.3-201ENST00000559866 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.2■□□□□ 0.34
AC243562.3-201ENST00000559866 TNFRSF25Q93038 417 aa17.2■□□□□ 0.34
AC243562.3-201ENST00000559866 KIFC3Q9BVG8 833 aa17.2■□□□□ 0.34
AC243562.3-201ENST00000559866 BRMS1Q9HCU9 246 aa17.2■□□□□ 0.34
AC243562.3-201ENST00000559866 INSL5Q9Y5Q6 135 aa17.2■□□□□ 0.34
AC243562.3-201ENST00000559866 SPATA31C1P0DKV0 1188 aa17.19■□□□□ 0.34
AC243562.3-201ENST00000559866 CXCL12P48061 93 aa17.19■□□□□ 0.34
AC243562.3-201ENST00000559866 ARPP19P56211 112 aa17.19■□□□□ 0.34
AC243562.3-201ENST00000559866 PRPF4BQ13523 1007 aaKnown RBP17.19■□□□□ 0.34
AC243562.3-201ENST00000559866 SF3A2Q15428 464 aaKnown RBP17.19■□□□□ 0.34
AC243562.3-201ENST00000559866 N4BP2L1Q5TBK1 243 aaPredicted RBP17.19■□□□□ 0.34
AC243562.3-201ENST00000559866 HEATR6Q6AI08 1181 aaKnown RBP17.19■□□□□ 0.34
AC243562.3-201ENST00000559866 ANKS3Q6ZW76 656 aa17.19■□□□□ 0.34
AC243562.3-201ENST00000559866 RTL10Q7L3V2 364 aa17.19■□□□□ 0.34
AC243562.3-201ENST00000559866 TMEM130Q8N3G9 435 aa17.19■□□□□ 0.34
AC243562.3-201ENST00000559866 FAM160A2Q8N612 972 aaPredicted RBP17.19■□□□□ 0.34
AC243562.3-201ENST00000559866 CEP120Q8N960 986 aa17.19■□□□□ 0.34
AC243562.3-201ENST00000559866 ZNF461Q8TAF7 563 aa17.19■□□□□ 0.34
AC243562.3-201ENST00000559866 WASF1Q92558 559 aa17.19■□□□□ 0.34
AC243562.3-201ENST00000559866 POLD4Q9HCU8 107 aa17.19■□□□□ 0.34
AC243562.3-201ENST00000559866 CEP72Q9P209 647 aa17.19■□□□□ 0.34
AC243562.3-201ENST00000559866 PRRG1O14668 218 aa17.18■□□□□ 0.34
AC243562.3-201ENST00000559866 PSMC3P17980 439 aa17.18■□□□□ 0.34
AC243562.3-201ENST00000559866 RBM25P49756 843 aaKnown RBP17.18■□□□□ 0.34
AC243562.3-201ENST00000559866 SCRN1Q12765 414 aa17.18■□□□□ 0.34
AC243562.3-201ENST00000559866 PTGDRQ13258 359 aa17.18■□□□□ 0.34
AC243562.3-201ENST00000559866 TXNDC11Q6PKC3 985 aa17.18■□□□□ 0.34
AC243562.3-201ENST00000559866 SMARCD2Q92925 531 aa17.18■□□□□ 0.34
AC243562.3-201ENST00000559866 IRF7Q92985 503 aa17.18■□□□□ 0.34
AC243562.3-201ENST00000559866 IER2Q9BTL4 223 aa17.18■□□□□ 0.34
AC243562.3-201ENST00000559866 TTC12Q9H892 705 aaPredicted RBP17.18■□□□□ 0.34
AC243562.3-201ENST00000559866 CYP4F11Q9HBI6 524 aa17.18■□□□□ 0.34
AC243562.3-201ENST00000559866 TRPV5Q9NQA5 729 aa17.18■□□□□ 0.34
AC243562.3-201ENST00000559866 PCDHA12Q9UN75 941 aa17.18■□□□□ 0.34
AC243562.3-201ENST00000559866 CITO14578 2027 aa17.18■□□□□ 0.34
AC243562.3-201ENST00000559866 LAMA1P25391 3075 aa17.17■□□□□ 0.34
AC243562.3-201ENST00000559866 SLC38A8A6NNN8 435 aa17.17■□□□□ 0.34
AC243562.3-201ENST00000559866 TM4SF5O14894 197 aa17.17■□□□□ 0.34
AC243562.3-201ENST00000559866 MED24O75448 989 aa17.17■□□□□ 0.34
AC243562.3-201ENST00000559866 HOXB3P14651 431 aaPredicted RBP17.17■□□□□ 0.34
AC243562.3-201ENST00000559866 ATF2P15336 505 aa17.17■□□□□ 0.34
AC243562.3-201ENST00000559866 KRT2P35908 639 aa17.17■□□□□ 0.34
AC243562.3-201ENST00000559866 TXKP42681 527 aa17.17■□□□□ 0.34
AC243562.3-201ENST00000559866 TMEM132AQ24JP5 1023 aa17.17■□□□□ 0.34
AC243562.3-201ENST00000559866 NT5DC1Q5TFE4 455 aa17.17■□□□□ 0.34
AC243562.3-201ENST00000559866 PDZD4Q76G19 769 aaPredicted RBP17.17■□□□□ 0.34
AC243562.3-201ENST00000559866 ZBTB8OSQ8IWT0 167 aa17.17■□□□□ 0.34
AC243562.3-201ENST00000559866 TCEAL8Q8IYN2 117 aa17.17■□□□□ 0.34
AC243562.3-201ENST00000559866 ZSCAN18Q8TBC5 510 aaPredicted RBP17.17■□□□□ 0.34
AC243562.3-201ENST00000559866 ANGPTL2Q9UKU9 493 aa17.17■□□□□ 0.34
AC243562.3-201ENST00000559866 TSC2P49815 1807 aa17.17■□□□□ 0.34
AC243562.3-201ENST00000559866 KIAA1549LQ6ZVL6 1849 aa17.17■□□□□ 0.34
AC243562.3-201ENST00000559866 F5P12259 2224 aa17.16■□□□□ 0.34
AC243562.3-201ENST00000559866 SMIM28A0A1B0GU29 152 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms