RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 MMGT1Q8N4V1 131 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 PSPC1Q8WXF1 523 aaKnown RBP19.13■□□□□ 0.65
SNX1-208ENST00000559844 PNKPQ96T60 521 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 FAM49AQ9H0Q0 323 aaPredicted RBP19.13■□□□□ 0.65
SNX1-208ENST00000559844 FAM53CQ9NYF3 392 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 NCANO14594 1321 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 CES2O00748 559 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 FTCDO95954 541 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 TMOD1P28289 359 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 EFNA5P52803 228 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 GALCP54803 685 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 MKRN4PQ13434 485 aaPredicted RBP19.13■□□□□ 0.65
SNX1-208ENST00000559844 CFAP221Q4G0U5 840 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 C1orf53Q5VUE5 145 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 SERINC5Q86VE9 423 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 PPM1KQ8N3J5 372 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 TAF4BQ92750 862 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 SEMA4DQ92854 862 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 CALR3Q96L12 384 aaKnown RBP19.13■□□□□ 0.65
SNX1-208ENST00000559844 ALPK3Q96L96 1907 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 SPDYE4A6NLX3 237 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 CLDN10P78369 228 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 CAPSQ13938 189 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 LRRC26Q2I0M4 334 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 TAF2Q6P1X5 1199 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 ENOSF1Q7L5Y1 443 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 FAM71AQ8IYT1 594 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 KRT222Q8N1A0 295 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 LINC01465Q8N7H1 131 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 TPCN2Q8NHX9 752 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 CTNNBL1Q8WYA6 563 aaPredicted RBP19.12■□□□□ 0.65
SNX1-208ENST00000559844 FNBP1Q96RU3 617 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 ATP11BQ9Y2G3 1177 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 SMIM35A0A1B0GVV1 85 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 DLATP10515 647 aaKnown RBP19.12■□□□□ 0.65
SNX1-208ENST00000559844 MXD4Q14582 209 aaPredicted RBP19.12■□□□□ 0.65
SNX1-208ENST00000559844 SV2AQ7L0J3 742 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 ANKRD33Q7Z3H0 272 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 DNAJB3Q8WWF6 145 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 RFFLQ8WZ73 363 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 SHC3Q92529 594 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 RUBCNQ92622 972 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 POP1Q99575 1024 aaKnown RBP19.12■□□□□ 0.65
SNX1-208ENST00000559844 SEPT11Q9NVA2 429 aaKnown RBP19.12■□□□□ 0.65
SNX1-208ENST00000559844 SUCLA2Q9P2R7 463 aaPredicted RBP19.12■□□□□ 0.65
SNX1-208ENST00000559844 AKT3Q9Y243 479 aa19.12■□□□□ 0.65
SNX1-208ENST00000559844 TULP1O00294 542 aaPredicted RBP19.11■□□□□ 0.65
SNX1-208ENST00000559844 SEC31AO94979 1220 aaKnown RBP19.11■□□□□ 0.65
SNX1-208ENST00000559844 TLE2Q04725 743 aa19.11■□□□□ 0.65
SNX1-208ENST00000559844 RPS6KA1Q15418 735 aa19.11■□□□□ 0.65
SNX1-208ENST00000559844 ZPBP2Q6X784 338 aa19.11■□□□□ 0.65
SNX1-208ENST00000559844 KIAA0319LQ8IZA0 1049 aa19.11■□□□□ 0.65
SNX1-208ENST00000559844 LRRC57Q8N9N7 239 aa19.11■□□□□ 0.65
SNX1-208ENST00000559844 SPATA4Q8NEY3 305 aa19.11■□□□□ 0.65
SNX1-208ENST00000559844 HELQQ8TDG4 1101 aa19.11■□□□□ 0.65
SNX1-208ENST00000559844 TAS1R2Q8TE23 839 aa19.11■□□□□ 0.65
SNX1-208ENST00000559844 WNT8BQ93098 351 aa19.11■□□□□ 0.65
SNX1-208ENST00000559844 TOPORSQ9NS56 1045 aaPredicted RBP19.11■□□□□ 0.65
SNX1-208ENST00000559844 ANKRD62A6NC57 917 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 DCDC2CA8MYV0 355 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 TLR3O15455 904 aaKnown RBP19.1■□□□□ 0.65
SNX1-208ENST00000559844 CD4P01730 458 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 VTNP04004 478 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 CXCR5P32302 372 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 MATR3P43243 847 aaKnown RBP eCLIP19.1■□□□□ 0.65
SNX1-208ENST00000559844 C2orf54Q08AI8 447 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 PTK7Q13308 1070 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 LONRF2Q1L5Z9 754 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 C15orf39Q6ZRI6 1047 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 KREMEN1Q96MU8 473 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 MSTO1Q9BUK6 570 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 C2orf40Q9H1Z8 148 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 USP8P40818 1118 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 VSNL1P62760 191 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 GCNT1Q02742 428 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 TMEM62Q0P6H9 643 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 SLFN11Q7Z7L1 901 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 RHPN2Q8IUC4 686 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 ZBTB8OSQ8IWT0 167 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 PRPF31Q8WWY3 499 aaKnown RBP19.1■□□□□ 0.65
SNX1-208ENST00000559844 PBKQ96KB5 322 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 TOX2Q96NM4 488 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 PPP1R16BQ96T49 567 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 PSMB7Q99436 277 aa19.1■□□□□ 0.65
SNX1-208ENST00000559844 TARS2Q9BW92 718 aaKnown RBP19.1■□□□□ 0.65
SNX1-208ENST00000559844 MYH10P35580 1976 aa19.09■□□□□ 0.65
SNX1-208ENST00000559844 A0A0B4J269 797 aa19.09■□□□□ 0.65
SNX1-208ENST00000559844 NLRP11P59045 1033 aaKnown RBP19.09■□□□□ 0.65
SNX1-208ENST00000559844 CBX1P83916 185 aa19.09■□□□□ 0.65
SNX1-208ENST00000559844 MAP9Q49MG5 647 aa19.09■□□□□ 0.65
SNX1-208ENST00000559844 CDCA2Q69YH5 1023 aaPredicted RBP19.09■□□□□ 0.65
SNX1-208ENST00000559844 RPUSD2Q8IZ73 545 aaKnown RBP19.09■□□□□ 0.65
SNX1-208ENST00000559844 DHX38Q92620 1227 aaKnown RBP19.09■□□□□ 0.65
SNX1-208ENST00000559844 KAT5Q92993 513 aa19.09■□□□□ 0.65
SNX1-208ENST00000559844 MRPL4Q9BYD3 311 aaKnown RBP19.09■□□□□ 0.65
SNX1-208ENST00000559844 C1orf112Q9NSG2 853 aa19.09■□□□□ 0.65
SNX1-208ENST00000559844 RBAKQ9NYW8 714 aaPredicted RBP19.09■□□□□ 0.65
SNX1-208ENST00000559844 KIF4AO95239 1232 aa19.08■□□□□ 0.65
SNX1-208ENST00000559844 TNNI1P19237 187 aa19.08■□□□□ 0.65
SNX1-208ENST00000559844 LAMTOR4Q0VGL1 99 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms