RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 LBHD1Q9BQE6 289 aaPredicted RBP11.26□□□□□ -0.61
TPM1-221ENST00000559831 FAM207AQ9NSI2 230 aaPredicted RBP11.26□□□□□ -0.61
TPM1-221ENST00000559831 MIOSQ9NXC5 875 aa11.26□□□□□ -0.61
TPM1-221ENST00000559831 DPP3Q9NY33 737 aa11.26□□□□□ -0.61
TPM1-221ENST00000559831 UBQLN1Q9UMX0 589 aaKnown RBP11.26□□□□□ -0.61
TPM1-221ENST00000559831 SIK3Q9Y2K2 1263 aa11.26□□□□□ -0.61
TPM1-221ENST00000559831 R3HCC1Q9Y3T6 440 aaKnown RBP11.26□□□□□ -0.61
TPM1-221ENST00000559831 ABHD14A-ACY1A0A1B0GW23 586 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 ZBBXA8MT70 800 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 GOLGA6L6A8MZA4 724 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 PTGESO14684 152 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 PMM2O15305 246 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 LRRN2O75325 713 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 OFD1O75665 1012 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 AMHP03971 560 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 ITGB3P05106 788 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 THP07101 528 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 KCNE1P15382 129 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 TRIM21P19474 475 aaKnown RBP11.25□□□□□ -0.61
TPM1-221ENST00000559831 POLR2BP30876 1174 aaKnown RBP11.25□□□□□ -0.61
TPM1-221ENST00000559831 GATMP50440 423 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 AFF1P51825 1210 aaKnown RBP11.25□□□□□ -0.61
TPM1-221ENST00000559831 CCDC173Q0VFZ6 552 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 NCOA4Q13772 614 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 XKR4Q5GH76 650 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 CLLU1OSQ5K130 101 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 SCARA3Q6AZY7 606 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 ZNF365Q70YC5 407 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 OTOP2Q7RTS6 562 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 PPFIBP1Q86W92 1011 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 NPAS4Q8IUM7 802 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 ABI1Q8IZP0 508 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 C1orf127Q8N9H9 656 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 CCDC150Q8NCX0 1101 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 URGCPQ8TCY9 931 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 CPLX3Q8WVH0 158 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 TSPAN18Q96SJ8 248 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 PI4K2AQ9BTU6 479 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 IMPG2Q9BZV3 1241 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 ELAC1Q9H777 363 aaKnown RBP11.25□□□□□ -0.61
TPM1-221ENST00000559831 GOLGA2P5Q9HBQ8 144 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 RNF216Q9NWF9 866 aaPredicted RBP11.25□□□□□ -0.61
TPM1-221ENST00000559831 RAB20Q9NX57 234 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 PLAGL2Q9UPG8 496 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 AGAP1Q9UPQ3 857 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.25□□□□□ -0.611e-6■■■□□ 19.1
TPM1-221ENST00000559831 ITIH6Q6UXX5 1313 aa11.25□□□□□ -0.61
TPM1-221ENST00000559831 HOXA2O43364 376 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 EFCAB14O75071 495 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 BAIAP3O94812 1187 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 FGBP02675 491 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 PTMAP06454 111 aaKnown RBP11.24□□□□□ -0.61
TPM1-221ENST00000559831 TPM1P09493 284 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 KCNJ6P48051 423 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 MYL6P60660 151 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 WDR5P61964 334 aaKnown RBP11.24□□□□□ -0.61
TPM1-221ENST00000559831 DEFB103AP81534 67 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 RBP5P82980 135 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 SOX4Q06945 474 aaPredicted RBP11.24□□□□□ -0.61
TPM1-221ENST00000559831 GOLGA8FQ08AF8 430 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 GOLGA8DPQ0D2H9 430 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 GRIK3Q13003 919 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 ZBTB6Q15916 424 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 NOMO2Q5JPE7 1267 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 WDR44Q5JSH3 913 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 SPOPLQ6IQ16 392 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 FAM117BQ6P1L5 589 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 GJB7Q6PEY0 223 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 PSRC1Q6PGN9 363 aaPredicted RBP11.24□□□□□ -0.61
TPM1-221ENST00000559831 TRIM65Q6PJ69 517 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 GSTCDQ8NEC7 633 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 NT5C1BQ96P26 610 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 PPP1R10Q96QC0 940 aaKnown RBP11.24□□□□□ -0.61
TPM1-221ENST00000559831 SIX2Q9NPC8 291 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 SLC38A7Q9NVC3 462 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 CACNG4Q9UBN1 327 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 SIX4Q9UIU6 781 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 ITGA11Q9UKX5 1188 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 COQ4Q9Y3A0 265 aa11.24□□□□□ -0.61
TPM1-221ENST00000559831 CASTOR2A6NHX0 329 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 TBKBP1A7MCY6 615 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 PPEF2O14830 753 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 EPHB6O15197 1021 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 CST3P01034 146 aaPredicted RBP11.23□□□□□ -0.61
TPM1-221ENST00000559831 CYP3A5P20815 502 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 EPHB4P54760 987 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 POLR2FP61218 127 aaKnown RBP11.23□□□□□ -0.61
TPM1-221ENST00000559831 NOP14P78316 857 aaKnown RBP11.23□□□□□ -0.61
TPM1-221ENST00000559831 RNASELQ05823 741 aaKnown RBP11.23□□□□□ -0.61
TPM1-221ENST00000559831 TRIM14Q14142 442 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 ZNF699Q32M78 642 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 PAN2Q504Q3 1202 aaKnown RBP11.23□□□□□ -0.61
TPM1-221ENST00000559831 KLHDC7AQ5VTJ3 777 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 C9orf57Q5W0N0 161 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 C16orf59Q7L2K0 433 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 CACNA2D4Q7Z3S7 1137 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 TMCO2Q7Z6W1 182 aaPredicted RBP11.23□□□□□ -0.61
TPM1-221ENST00000559831 ARHGEF19Q8IW93 802 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 LMO3Q8TAP4 145 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 TATDN2Q93075 761 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms