RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 UBE3BQ7Z3V4 1068 aa4.98□□□□□ -1.61
SPG11-218ENST00000559754 PRIMA1Q86XR5 153 aa4.98□□□□□ -1.61
SPG11-218ENST00000559754 RHOT1Q8IXI2 618 aa4.98□□□□□ -1.61
SPG11-218ENST00000559754 OR2I1PQ8NGU4 316 aa4.98□□□□□ -1.61
SPG11-218ENST00000559754 NRG4Q8WWG1 115 aa4.98□□□□□ -1.61
SPG11-218ENST00000559754 FUBP1Q96AE4 644 aaKnown RBP4.98□□□□□ -1.61
SPG11-218ENST00000559754 RNF31Q96EP0 1072 aa4.98□□□□□ -1.61
SPG11-218ENST00000559754 SLC2A13Q96QE2 648 aa4.98□□□□□ -1.61
SPG11-218ENST00000559754 MED15Q96RN5 788 aa4.98□□□□□ -1.61
SPG11-218ENST00000559754 PNKPQ96T60 521 aa4.98□□□□□ -1.61
SPG11-218ENST00000559754 ZSWIM1Q9BR11 485 aa4.98□□□□□ -1.61
SPG11-218ENST00000559754 FAM126AQ9BYI3 521 aaPredicted RBP4.98□□□□□ -1.61
SPG11-218ENST00000559754 FBXO34Q9NWN3 711 aa4.98□□□□□ -1.61
SPG11-218ENST00000559754 INTUQ9ULD6 942 aa4.98□□□□□ -1.61
SPG11-218ENST00000559754 MTO1Q9Y2Z2 717 aaKnown RBP4.98□□□□□ -1.61
SPG11-218ENST00000559754 MAST3O60307 1309 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 SBNO2Q9Y2G9 1366 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 MYADML2A6NDP7 307 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 ERN1O75460 977 aaKnown RBP4.97□□□□□ -1.61
SPG11-218ENST00000559754 AMY1AP04745 511 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 SLC6A2P23975 617 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 CXCR5P32302 372 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 CTXN1P60606 82 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 ATP8B2P98198 1209 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 INAVAQ3KP66 663 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 DACT2Q5SW24 774 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 GPR149Q86SP6 731 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 RSPH3Q86UC2 560 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 COLGALT2Q8IYK4 626 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 PPM1NQ8N819 430 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 C1orf162Q8NEQ5 155 aaPredicted RBP4.97□□□□□ -1.61
SPG11-218ENST00000559754 DPF2Q92785 391 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 HDAC10Q969S8 669 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 MYOCQ99972 504 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 C11orf54Q9H0W9 315 aaPredicted RBP4.97□□□□□ -1.61
SPG11-218ENST00000559754 TDP1Q9NUW8 608 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 RUVBL1Q9Y265 456 aaKnown RBP4.97□□□□□ -1.61
SPG11-218ENST00000559754 INSL6Q9Y581 213 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 MRFAP1Q9Y605 127 aa4.97□□□□□ -1.61
SPG11-218ENST00000559754 KLHL33A6NCF5 533 aa4.96□□□□□ -1.62
SPG11-218ENST00000559754 KIAA0355O15063 1070 aa4.96□□□□□ -1.62
SPG11-218ENST00000559754 KIAA0391O15091 583 aaKnown RBP4.96□□□□□ -1.62
SPG11-218ENST00000559754 NDUFS2O75306 463 aa4.96□□□□□ -1.62
SPG11-218ENST00000559754 HAUS5O94927 633 aa4.96□□□□□ -1.62
SPG11-218ENST00000559754 RPLP2P05387 115 aaKnown RBP4.96□□□□□ -1.62
SPG11-218ENST00000559754 MTHFD1P11586 935 aaKnown RBP4.96□□□□□ -1.62
SPG11-218ENST00000559754 TYRP1P17643 537 aa4.96□□□□□ -1.62
SPG11-218ENST00000559754 HSD11B2P80365 405 aa4.96□□□□□ -1.62
SPG11-218ENST00000559754 FOXI1Q12951 378 aa4.96□□□□□ -1.62
SPG11-218ENST00000559754 ACAP2Q15057 778 aa4.96□□□□□ -1.62
SPG11-218ENST00000559754 SYDE2Q5VT97 1194 aa4.96□□□□□ -1.62
SPG11-218ENST00000559754 SLC44A3Q8N4M1 653 aa4.96□□□□□ -1.62
SPG11-218ENST00000559754 CAGE1Q8TC20 777 aa4.96□□□□□ -1.62
SPG11-218ENST00000559754 NELL1Q92832 810 aa4.96□□□□□ -1.62
SPG11-218ENST00000559754 Q96MF0 132 aa4.96□□□□□ -1.62
SPG11-218ENST00000559754 GSTO2Q9H4Y5 243 aa4.96□□□□□ -1.62
SPG11-218ENST00000559754 SYNPO2LQ9H987 977 aa4.96□□□□□ -1.62
SPG11-218ENST00000559754 CASS4Q9NQ75 786 aa4.96□□□□□ -1.62
SPG11-218ENST00000559754 DMTF1Q9Y222 760 aa4.96□□□□□ -1.62
SPG11-218ENST00000559754 AATKQ6ZMQ8 1374 aa4.95□□□□□ -1.62
SPG11-218ENST00000559754 TCRBV7S2A1N4TA0A589 114 aa4.95□□□□□ -1.62
SPG11-218ENST00000559754 CDHR4A6H8M9 788 aa4.95□□□□□ -1.62
SPG11-218ENST00000559754 SGTAO43765 313 aa4.95□□□□□ -1.62
SPG11-218ENST00000559754 IARSP41252 1262 aaKnown RBP4.95□□□□□ -1.62
SPG11-218ENST00000559754 KRT85P78386 507 aa4.95□□□□□ -1.62
SPG11-218ENST00000559754 CDC42EP1Q00587 391 aa4.95□□□□□ -1.62
SPG11-218ENST00000559754 SCAPQ12770 1279 aa4.95□□□□□ -1.62
SPG11-218ENST00000559754 CYP2A13Q16696 494 aa4.95□□□□□ -1.62
SPG11-218ENST00000559754 PRR16Q569H4 304 aa4.95□□□□□ -1.62
SPG11-218ENST00000559754 PPP4R3AQ6IN85 833 aa4.95□□□□□ -1.62
SPG11-218ENST00000559754 KRTAP5-3Q6L8H2 238 aa4.95□□□□□ -1.62
SPG11-218ENST00000559754 ADGRG3Q86Y34 549 aa4.95□□□□□ -1.62
SPG11-218ENST00000559754 ZGPATQ8N5A5 531 aaKnown RBP4.95□□□□□ -1.62
SPG11-218ENST00000559754 TBC1D15Q8TC07 691 aa4.95□□□□□ -1.62
SPG11-218ENST00000559754 JADE3Q92613 823 aa4.95□□□□□ -1.62
SPG11-218ENST00000559754 MARS2Q96GW9 593 aaKnown RBP4.95□□□□□ -1.62
SPG11-218ENST00000559754 FAXDC2Q96IV6 333 aa4.95□□□□□ -1.62
SPG11-218ENST00000559754 PTGFRNQ9P2B2 879 aa4.95□□□□□ -1.62
SPG11-218ENST00000559754 PRSS23O95084 383 aa4.94□□□□□ -1.62
SPG11-218ENST00000559754 FBLP22087 321 aaKnown RBP4.94□□□□□ -1.62
SPG11-218ENST00000559754 MPLP40238 635 aa4.94□□□□□ -1.62
SPG11-218ENST00000559754 GUCY2FP51841 1108 aa4.94□□□□□ -1.62
SPG11-218ENST00000559754 VAV2P52735 878 aa4.94□□□□□ -1.62
SPG11-218ENST00000559754 RAB39AQ14964 217 aa4.94□□□□□ -1.62
SPG11-218ENST00000559754 PABPC1LQ4VXU2 614 aaKnown RBP4.94□□□□□ -1.62
SPG11-218ENST00000559754 Q6ZNX1 250 aa4.94□□□□□ -1.62
SPG11-218ENST00000559754 CBARPQ8N350 705 aaPredicted RBP4.94□□□□□ -1.62
SPG11-218ENST00000559754 TMX3Q96JJ7 454 aa4.94□□□□□ -1.62
SPG11-218ENST00000559754 USP25Q9UHP3 1055 aa4.94□□□□□ -1.62
SPG11-218ENST00000559754 TRHDEQ9UKU6 1024 aa4.94□□□□□ -1.62
SPG11-218ENST00000559754 NEU2Q9Y3R4 380 aa4.94□□□□□ -1.62
SPG11-218ENST00000559754 SHTN1A0MZ66 631 aa4.93□□□□□ -1.62
SPG11-218ENST00000559754 ALG1L2C9J202 215 aa4.93□□□□□ -1.62
SPG11-218ENST00000559754 XPOTO43592 962 aaKnown RBP4.93□□□□□ -1.62
SPG11-218ENST00000559754 MT-CO1P00395 513 aa4.93□□□□□ -1.62
SPG11-218ENST00000559754 MYBL2P10244 700 aa4.93□□□□□ -1.62
SPG11-218ENST00000559754 CD38P28907 300 aa4.93□□□□□ -1.62
SPG11-218ENST00000559754 NOMO3P69849 1222 aa4.93□□□□□ -1.62
SPG11-218ENST00000559754 ITKQ08881 620 aa4.93□□□□□ -1.62
SPG11-218ENST00000559754 NOMO2Q5JPE7 1267 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms