RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 ORC2Q13416 577 aaPredicted RBP12.19□□□□□ -0.46
HERC1-204ENST00000559715 DCAF4L1Q3SXM0 396 aa12.19□□□□□ -0.46
HERC1-204ENST00000559715 PABPC1LQ4VXU2 614 aaKnown RBP12.19□□□□□ -0.46
HERC1-204ENST00000559715 TANGO2Q6ICL3 276 aa12.19□□□□□ -0.46
HERC1-204ENST00000559715 PDXDC1Q6P996 788 aa12.19□□□□□ -0.46
HERC1-204ENST00000559715 MTSS1LQ765P7 747 aa12.19□□□□□ -0.46
HERC1-204ENST00000559715 KCNK18Q7Z418 384 aa12.19□□□□□ -0.46
HERC1-204ENST00000559715 IGSF22Q8N9C0 903 aa12.19□□□□□ -0.46
HERC1-204ENST00000559715 FBXO18Q8NFZ0 1043 aa12.19□□□□□ -0.46
HERC1-204ENST00000559715 ING5Q8WYH8 240 aa12.19□□□□□ -0.46
HERC1-204ENST00000559715 TCEAL4Q96EI5 215 aa12.19□□□□□ -0.46
HERC1-204ENST00000559715 SHDQ96IW2 340 aa12.19□□□□□ -0.46
HERC1-204ENST00000559715 CCDC43Q96MW1 224 aaKnown RBP12.19□□□□□ -0.46
HERC1-204ENST00000559715 MMTAG2Q9BU76 263 aaKnown RBP12.19□□□□□ -0.46
HERC1-204ENST00000559715 BHMT2Q9H2M3 363 aa12.19□□□□□ -0.46
HERC1-204ENST00000559715 LTB4R2Q9NPC1 389 aa12.19□□□□□ -0.46
HERC1-204ENST00000559715 ARHGAP28Q9P2N2 729 aa12.19□□□□□ -0.46
HERC1-204ENST00000559715 FBXO4Q9UKT5 387 aa12.19□□□□□ -0.46
HERC1-204ENST00000559715 POLIQ9UNA4 740 aa12.19□□□□□ -0.46
HERC1-204ENST00000559715 ARHGEF35A5YM69 484 aa12.18□□□□□ -0.46
HERC1-204ENST00000559715 XYLBO75191 536 aa12.18□□□□□ -0.46
HERC1-204ENST00000559715 ECI2O75521 394 aa12.18□□□□□ -0.46
HERC1-204ENST00000559715 VNN2O95498 520 aa12.18□□□□□ -0.46
HERC1-204ENST00000559715 RHOP08100 348 aa12.18□□□□□ -0.46
HERC1-204ENST00000559715 KCNE1P15382 129 aa12.18□□□□□ -0.46
HERC1-204ENST00000559715 LIG1P18858 919 aa12.18□□□□□ -0.46
HERC1-204ENST00000559715 NPTX2P47972 431 aa12.18□□□□□ -0.46
HERC1-204ENST00000559715 VARS2Q5ST30 1063 aaKnown RBP12.18□□□□□ -0.46
HERC1-204ENST00000559715 TCEAL8Q8IYN2 117 aa12.18□□□□□ -0.46
HERC1-204ENST00000559715 DEPTORQ8TB45 409 aa12.18□□□□□ -0.46
HERC1-204ENST00000559715 KCNG4Q8TDN1 519 aa12.18□□□□□ -0.46
HERC1-204ENST00000559715 RUBCNQ92622 972 aa12.18□□□□□ -0.46
HERC1-204ENST00000559715 C18orf25Q96B23 403 aaPredicted RBP12.18□□□□□ -0.46
HERC1-204ENST00000559715 MCRS1Q96EZ8 462 aa12.18□□□□□ -0.46
HERC1-204ENST00000559715 ZSWIM3Q96MP5 696 aa12.18□□□□□ -0.46
HERC1-204ENST00000559715 KIF2CQ99661 725 aa12.18□□□□□ -0.46
HERC1-204ENST00000559715 ADPGKQ9BRR6 497 aa12.18□□□□□ -0.46
HERC1-204ENST00000559715 FOXP1Q9H334 677 aaPredicted RBP12.18□□□□□ -0.46
HERC1-204ENST00000559715 GDE1Q9NZC3 331 aa12.18□□□□□ -0.46
HERC1-204ENST00000559715 KIAA1024Q9UPX6 916 aa12.18□□□□□ -0.46
HERC1-204ENST00000559715 PP2D1A8MPX8 630 aa12.17□□□□□ -0.46
HERC1-204ENST00000559715 E9PMD0 336 aa12.17□□□□□ -0.46
HERC1-204ENST00000559715 K7ERI5 159 aa12.17□□□□□ -0.46
HERC1-204ENST00000559715 ATF2P15336 505 aa12.17□□□□□ -0.46
HERC1-204ENST00000559715 RPS9P46781 194 aaKnown RBP12.17□□□□□ -0.46
HERC1-204ENST00000559715 PDIA5Q14554 519 aa12.17□□□□□ -0.46
HERC1-204ENST00000559715 PPP2R5AQ15172 486 aa12.17□□□□□ -0.46
HERC1-204ENST00000559715 TTC38Q5R3I4 469 aa12.17□□□□□ -0.46
HERC1-204ENST00000559715 ANKS3Q6ZW76 656 aa12.17□□□□□ -0.46
HERC1-204ENST00000559715 C1orf186Q6ZWK4 172 aa12.17□□□□□ -0.46
HERC1-204ENST00000559715 MAP4K3Q8IVH8 894 aa12.17□□□□□ -0.46
HERC1-204ENST00000559715 KIFAP3Q92845 792 aa12.17□□□□□ -0.46
HERC1-204ENST00000559715 ZBTB45Q96K62 511 aaPredicted RBP12.17□□□□□ -0.46
HERC1-204ENST00000559715 UROC1Q96N76 676 aa12.17□□□□□ -0.46
HERC1-204ENST00000559715 NTPCRQ9BSD7 190 aaKnown RBP12.17□□□□□ -0.46
HERC1-204ENST00000559715 RUSC1Q9BVN2 902 aa12.17□□□□□ -0.46
HERC1-204ENST00000559715 TARS2Q9BW92 718 aaKnown RBP12.17□□□□□ -0.46
HERC1-204ENST00000559715 HAPLN2Q9GZV7 340 aa12.17□□□□□ -0.46
HERC1-204ENST00000559715 TMEM134Q9H6X4 195 aa12.17□□□□□ -0.46
HERC1-204ENST00000559715 HEBP1Q9NRV9 189 aa12.17□□□□□ -0.46
HERC1-204ENST00000559715 DAXXQ9UER7 740 aaPredicted RBP12.17□□□□□ -0.46
HERC1-204ENST00000559715 MRPS23Q9Y3D9 190 aaKnown RBP12.17□□□□□ -0.46
HERC1-204ENST00000559715 DENND4CQ5VZ89 1909 aa12.17□□□□□ -0.46
HERC1-204ENST00000559715 KIF26AQ9ULI4 1882 aaPredicted RBP12.17□□□□□ -0.46
HERC1-204ENST00000559715 ARNTLO00327 626 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 MICAL2O94851 1124 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 PTPN2P17706 415 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 U2AF2P26368 475 aaKnown RBP eCLIP12.16□□□□□ -0.462e-16■■■■■ 32.7
HERC1-204ENST00000559715 CDC25AP30304 524 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 CCT6AP40227 531 aaKnown RBP12.16□□□□□ -0.46
HERC1-204ENST00000559715 EPHA5P54756 1037 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 PEX3P56589 373 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 PFKPQ01813 784 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 UBXN2BQ14CS0 331 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 SLC10A6Q3KNW5 377 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 WDR44Q5JSH3 913 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 FAM78AQ5JUQ0 283 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 RINT1Q6NUQ1 792 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 ZC3H14Q6PJT7 736 aaKnown RBP12.16□□□□□ -0.46
HERC1-204ENST00000559715 TSSK4Q6SA08 328 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 MAMSTRQ6ZN01 415 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 BEST2Q8NFU1 509 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 ELSPBP1Q96BH3 223 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 LRRC3Q9BY71 257 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 PRMT8Q9NR22 394 aaPredicted RBP12.16□□□□□ -0.46
HERC1-204ENST00000559715 DDX19AQ9NUU7 478 aaKnown RBP12.16□□□□□ -0.46
HERC1-204ENST00000559715 SPATA6Q9NWH7 488 aaPredicted RBP12.16□□□□□ -0.46
HERC1-204ENST00000559715 CEP72Q9P209 647 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 CNTN3Q9P232 1028 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 LRWD1Q9UFC0 647 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 FBXL5Q9UKA1 691 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 PCDHB6Q9Y5E3 794 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 SDK1Q7Z5N4 2213 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 SCN1AP35498 2009 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 TSC2P49815 1807 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 ASPMQ8IZT6 3477 aa12.16□□□□□ -0.46
HERC1-204ENST00000559715 PHLPP2Q6ZVD8 1323 aa12.15□□□□□ -0.46
HERC1-204ENST00000559715 RALGAPA1Q6GYQ0 2036 aa12.15□□□□□ -0.46
HERC1-204ENST00000559715 PODXLO00592 558 aa12.15□□□□□ -0.46
HERC1-204ENST00000559715 SYN3O14994 580 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms