RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 ZNF677Q86XU0 584 aa13.63□□□□□ -0.23
USP3-213ENST00000559711 DNAAF5Q86Y56 855 aa13.63□□□□□ -0.23
USP3-213ENST00000559711 UBR7Q8N806 425 aa13.63□□□□□ -0.23
USP3-213ENST00000559711 XYLT2Q9H1B5 865 aa13.63□□□□□ -0.23
USP3-213ENST00000559711 ACP6Q9NPH0 428 aa13.63□□□□□ -0.23
USP3-213ENST00000559711 TAS2R14Q9NYV8 317 aa13.63□□□□□ -0.23
USP3-213ENST00000559711 SRRDQ9UH36 339 aa13.63□□□□□ -0.23
USP3-213ENST00000559711 SNX12Q9UMY4 172 aa13.63□□□□□ -0.23
USP3-213ENST00000559711 PCDHB2Q9Y5E7 798 aa13.63□□□□□ -0.23
USP3-213ENST00000559711 NCANO14594 1321 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 EVPLQ92817 2033 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 ADAMTS4O75173 837 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 RTN2O75298 545 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 PALMO75781 387 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 PGK1P00558 417 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 KRT5P13647 590 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 FGFR4P22455 802 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 HOXD10P28358 340 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 AXLP30530 894 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 MAP2K2P36507 400 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 GRM5P41594 1212 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 MYL6P60660 151 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 TRPC3Q13507 836 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 TCEAL1Q15170 157 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 TAF2Q6P1X5 1199 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 CATSPER4Q7RTX7 472 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 APBB1IPQ7Z5R6 666 aaPredicted RBP13.62□□□□□ -0.23
USP3-213ENST00000559711 CD302Q8IX05 232 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 TAF4BQ92750 862 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 FAXDC2Q96IV6 333 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 ACAP3Q96P50 834 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 OSMRQ99650 979 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 SEPT11Q9NVA2 429 aaKnown RBP13.62□□□□□ -0.23
USP3-213ENST00000559711 TSKSQ9UJT2 592 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 MROH7Q68CQ1 1323 aa13.62□□□□□ -0.23
USP3-213ENST00000559711 ZSWIM8A7E2V4 1837 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 GRID2IPA4D2P6 1211 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 TMCO5BA8MYB1 307 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 FTLP02792 175 aaPredicted RBP13.61□□□□□ -0.23
USP3-213ENST00000559711 MMEP08473 750 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 CRYBB1P53674 252 aaPredicted RBP13.61□□□□□ -0.23
USP3-213ENST00000559711 SNX17Q15036 470 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 NBPF20Q3BBV1 942 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 TAF3Q5VWG9 929 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 SLC27A1Q6PCB7 646 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 RSRC2Q7L4I2 434 aaKnown RBP13.61□□□□□ -0.23
USP3-213ENST00000559711 NT5DC4Q86YG4 428 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 LRRC57Q8N9N7 239 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 KLHDC9Q8NEP7 349 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 TPCN2Q8NHX9 752 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 CXorf38Q8TB03 319 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 CTNNBL1Q8WYA6 563 aaPredicted RBP13.61□□□□□ -0.23
USP3-213ENST00000559711 RFFLQ8WZ73 363 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 ANKRD7Q92527 254 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 TLR10Q9BXR5 811 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 GTF2IRD1Q9UHL9 959 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 SIX4Q9UIU6 781 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 GINS2Q9Y248 185 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 C2CD2Q9Y426 696 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 UMODL1Q5DID0 1318 aa13.61□□□□□ -0.23
USP3-213ENST00000559711 TRPA1O75762 1119 aa13.6□□□□□ -0.23
USP3-213ENST00000559711 NFICP08651 508 aa13.6□□□□□ -0.23
USP3-213ENST00000559711 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
USP3-213ENST00000559711 TCP1P17987 556 aaKnown RBP13.6□□□□□ -0.23
USP3-213ENST00000559711 CCND3P30281 292 aaPredicted RBP13.6□□□□□ -0.23
USP3-213ENST00000559711 NOP2P46087 812 aaKnown RBP13.6□□□□□ -0.23
USP3-213ENST00000559711 ZNF132P52740 706 aa13.6□□□□□ -0.23
USP3-213ENST00000559711 TUBB4BP68371 445 aa13.6□□□□□ -0.23
USP3-213ENST00000559711 ERCC6LQ2NKX8 1250 aa13.6□□□□□ -0.23
USP3-213ENST00000559711 MAP3K21Q5TCX8 1036 aa13.6□□□□□ -0.23
USP3-213ENST00000559711 MEI1Q5TIA1 1274 aa13.6□□□□□ -0.23
USP3-213ENST00000559711 JADE1Q6IE81 842 aa13.6□□□□□ -0.23
USP3-213ENST00000559711 CCSAPQ6IQ19 270 aaPredicted RBP13.6□□□□□ -0.23
USP3-213ENST00000559711 NOTUMQ6P988 496 aa13.6□□□□□ -0.23
USP3-213ENST00000559711 CXCL17Q6UXB2 119 aa13.6□□□□□ -0.23
USP3-213ENST00000559711 SLFN11Q7Z7L1 901 aa13.6□□□□□ -0.23
USP3-213ENST00000559711 C1orf127Q8N9H9 656 aa13.6□□□□□ -0.23
USP3-213ENST00000559711 UBXN4Q92575 508 aa13.6□□□□□ -0.23
USP3-213ENST00000559711 CALR3Q96L12 384 aaKnown RBP13.6□□□□□ -0.23
USP3-213ENST00000559711 NIF3L1Q9GZT8 377 aa13.6□□□□□ -0.23
USP3-213ENST00000559711 PLEKHA5Q9HAU0 1116 aa13.6□□□□□ -0.23
USP3-213ENST00000559711 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.6□□□□□ -0.23
USP3-213ENST00000559711 PCDHB4Q9Y5E5 795 aa13.6□□□□□ -0.23
USP3-213ENST00000559711 V9GYY5 206 aaPredicted RBP13.6□□□□□ -0.23
USP3-213ENST00000559711 MGAMO43451 1857 aa13.6□□□□□ -0.23
USP3-213ENST00000559711 SRGAP2O75044 1071 aa13.59□□□□□ -0.23
USP3-213ENST00000559711 TFRCP02786 760 aaKnown RBP13.59□□□□□ -0.23
USP3-213ENST00000559711 ELNP15502 786 aa13.59□□□□□ -0.23
USP3-213ENST00000559711 CST5P28325 142 aaPredicted RBP13.59□□□□□ -0.23
USP3-213ENST00000559711 HADHBP55084 474 aaKnown RBP13.59□□□□□ -0.23
USP3-213ENST00000559711 CLEC16AQ2KHT3 1053 aa13.59□□□□□ -0.23
USP3-213ENST00000559711 ZNF699Q32M78 642 aa13.59□□□□□ -0.23
USP3-213ENST00000559711 SLC35G2Q8TBE7 412 aa13.59□□□□□ -0.23
USP3-213ENST00000559711 TMEM40Q8WWA1 233 aa13.59□□□□□ -0.23
USP3-213ENST00000559711 CCDC94Q9BW85 323 aaPredicted RBP13.59□□□□□ -0.23
USP3-213ENST00000559711 THAP2Q9H0W7 228 aa13.59□□□□□ -0.23
USP3-213ENST00000559711 VRTNQ9H8Y1 702 aa13.59□□□□□ -0.23
USP3-213ENST00000559711 XPNPEP3Q9NQH7 507 aa13.59□□□□□ -0.23
USP3-213ENST00000559711 HYOU1Q9Y4L1 999 aa13.59□□□□□ -0.23
USP3-213ENST00000559711 NPTXRO95502 500 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms