RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 MS4A4AQ96JQ5 239 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 FAM81BQ96LP2 452 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 ERP44Q9BS26 406 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 CAPS2Q9BXY5 557 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 TMEM134Q9H6X4 195 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 EFCC1Q9HA90 598 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 NRBP2Q9NSY0 501 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 PCDHB2Q9Y5E7 798 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 GRIN2DO15399 1336 aa11.82□□□□□ -0.52
SPG11-217ENST00000559511 UMODL1Q5DID0 1318 aa11.82□□□□□ -0.52
SPG11-217ENST00000559511 ADCY3O60266 1144 aa11.82□□□□□ -0.52
SPG11-217ENST00000559511 MARK3P27448 753 aa11.82□□□□□ -0.52
SPG11-217ENST00000559511 IRAK1P51617 712 aa11.82□□□□□ -0.52
SPG11-217ENST00000559511 SKOR1P84550 965 aa11.82□□□□□ -0.52
SPG11-217ENST00000559511 CUL2Q13617 745 aa11.82□□□□□ -0.52
SPG11-217ENST00000559511 DHX34Q14147 1143 aaKnown RBP11.82□□□□□ -0.52
SPG11-217ENST00000559511 HSDL1Q3SXM5 330 aa11.82□□□□□ -0.52
SPG11-217ENST00000559511 FAM160B1Q5W0V3 765 aa11.82□□□□□ -0.52
SPG11-217ENST00000559511 PHLDB2Q86SQ0 1253 aa11.82□□□□□ -0.52
SPG11-217ENST00000559511 TRIM50Q86XT4 487 aa11.82□□□□□ -0.52
SPG11-217ENST00000559511 FBXO16Q8IX29 292 aaPredicted RBP11.82□□□□□ -0.52
SPG11-217ENST00000559511 UBLCP1Q8WVY7 318 aaPredicted RBP11.82□□□□□ -0.52
SPG11-217ENST00000559511 PRPF31Q8WWY3 499 aaKnown RBP11.82□□□□□ -0.52
SPG11-217ENST00000559511 CGRRF1Q99675 332 aa11.82□□□□□ -0.52
SPG11-217ENST00000559511 ZDHHC18Q9NUE0 388 aa11.82□□□□□ -0.52
SPG11-217ENST00000559511 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.82□□□□□ -0.52
SPG11-217ENST00000559511 ANAPC7Q9UJX3 599 aa11.82□□□□□ -0.52
SPG11-217ENST00000559511 PNMA3Q9UL41 463 aa11.82□□□□□ -0.52
SPG11-217ENST00000559511 MROH7Q68CQ1 1323 aa11.82□□□□□ -0.52
SPG11-217ENST00000559511 FAM187AA6NFU0 413 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 UNCXA6NJT0 531 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 FAM189A1O60320 539 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 LDHAP00338 332 aaKnown RBP11.81□□□□□ -0.52
SPG11-217ENST00000559511 IVLP07476 585 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 HSPA6P17066 643 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 RRM1P23921 792 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 CHRNA3P32297 505 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 SSTR3P32745 418 aaPredicted RBP11.81□□□□□ -0.52
SPG11-217ENST00000559511 TNFSF9P41273 254 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 ATP1A2P50993 1020 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 DHX9Q08211 1270 aaKnown RBP11.81□□□□□ -0.52
SPG11-217ENST00000559511 ZNF844Q08AG5 666 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 MKRN4PQ13434 485 aaPredicted RBP11.81□□□□□ -0.52
SPG11-217ENST00000559511 SIX1Q15475 284 aaPredicted RBP11.81□□□□□ -0.52
SPG11-217ENST00000559511 CELF3Q5SZQ8 465 aaKnown RBP11.81□□□□□ -0.52
SPG11-217ENST00000559511 TMEM63BQ5T3F8 832 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 CCDC62Q6P9F0 684 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 KCNV1Q6PIU1 500 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 LRIG3Q6UXM1 1119 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 ZNF677Q86XU0 584 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 SLC13A5Q86YT5 568 aaPredicted RBP11.81□□□□□ -0.52
SPG11-217ENST00000559511 MAGOHBQ96A72 148 aaKnown RBP11.81□□□□□ -0.52
SPG11-217ENST00000559511 CYFIP2Q96F07 1278 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 ATP6V1G3Q96LB4 118 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 GPR20Q99678 358 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 TXLNGYQ9BZA5 131 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 TMBIM4Q9HC24 238 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 PCYOX1Q9UHG3 505 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 NUB1Q9Y5A7 615 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 ZBTB42B2RXF5 422 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 PDHXO00330 501 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 MSCO60682 206 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 CYP1A1P04798 512 aaPredicted RBP11.81□□□□□ -0.52
SPG11-217ENST00000559511 MAPK4P31152 587 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 RWDD2BP57060 319 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 GNGT1P63211 74 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 NOP14P78316 857 aaKnown RBP11.81□□□□□ -0.52
SPG11-217ENST00000559511 CENPCQ03188 943 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 MKRN3Q13064 507 aaKnown RBP11.81□□□□□ -0.52
SPG11-217ENST00000559511 LLGL1Q15334 1064 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 CYP1B1Q16678 543 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 CCDC137Q6PK04 289 aaKnown RBP11.81□□□□□ -0.52
SPG11-217ENST00000559511 TMEM270Q6UE05 265 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 ZDHHC24Q6UX98 284 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 PASD1Q8IV76 773 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 C1orf131Q8NDD1 294 aaKnown RBP11.81□□□□□ -0.52
SPG11-217ENST00000559511 FMO2Q99518 471 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 CCDC113Q9H0I3 377 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 SNX24Q9Y343 169 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 PCDHB4Q9Y5E5 795 aa11.81□□□□□ -0.52
SPG11-217ENST00000559511 BTBD19C9JJ37 291 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 CLDN3O15551 220 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 PPFIA2O75334 1257 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 LGR5O75473 907 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 CLTAP09496 248 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 RARAP10276 462 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 CETPP11597 493 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 BPIFB4P59827 614 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 NCOA4Q13772 614 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 KDM7AQ6ZMT4 941 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 MON1BQ7L1V2 547 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 ZBTB33Q86T24 672 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 LRRC71Q8N4P6 559 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 GPRC5AQ8NFJ5 357 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 COPS5Q92905 334 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 AZI2Q9H6S1 392 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 LRRC4CQ9HCJ2 640 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 AVENQ9NQS1 362 aaPredicted RBP11.8□□□□□ -0.52
SPG11-217ENST00000559511 PDGFCQ9NRA1 345 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 GRHL1Q9NZI5 618 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms