RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 PLCB2Q00722 1185 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 KCNC3Q14003 757 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 E2F4Q16254 413 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 SLC10A6Q3KNW5 377 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 SEZ6Q53EL9 994 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 LIN9Q5TKA1 542 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 KIAA0319Q5VV43 1072 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 KANK3Q6NY19 840 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 ARMCX5Q6P1M9 558 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 CNNM4Q6P4Q7 775 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 CYP26C1Q6V0L0 522 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.75□□□□□ -1.65
SNX1-205ENST00000559339 C15orf39Q6ZRI6 1047 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 UNC13DQ70J99 1090 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 RTL10Q7L3V2 364 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 HS2ST1Q7LGA3 356 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 TAS1R1Q7RTX1 841 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 USP37Q86T82 979 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 NT5DC4Q86YG4 428 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 RNF168Q8IYW5 571 aaPredicted RBP4.75□□□□□ -1.65
SNX1-205ENST00000559339 BEST2Q8NFU1 509 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 GOLGA5Q8TBA6 731 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 NOC3LQ8WTT2 800 aaKnown RBP4.75□□□□□ -1.65
SNX1-205ENST00000559339 HDAC7Q8WUI4 952 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 CACTINQ8WUQ7 758 aaKnown RBP4.75□□□□□ -1.65
SNX1-205ENST00000559339 LEO1Q8WVC0 666 aaPredicted RBP4.75□□□□□ -1.65
SNX1-205ENST00000559339 AUTS2Q8WXX7 1259 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 PIK3R5Q8WYR1 880 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 MS4A3Q96HJ5 214 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 RPGRIP1Q96KN7 1286 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 ZMAT2Q96NC0 199 aaKnown RBP4.75□□□□□ -1.65
SNX1-205ENST00000559339 NECAB3Q96P71 396 aaPredicted RBP4.75□□□□□ -1.65
SNX1-205ENST00000559339 FIZ1Q96SL8 496 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 C7orf25Q9BPX7 421 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 PAAF1Q9BRP4 392 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 FAM213AQ9BRX8 229 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 APOL5Q9BWW9 433 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 PHF7Q9BWX1 381 aaPredicted RBP4.75□□□□□ -1.65
SNX1-205ENST00000559339 VN1R3Q9BXE9 311 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 C1QTNF1Q9BXJ1 281 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 OXCT2Q9BYC2 517 aaPredicted RBP4.75□□□□□ -1.65
SNX1-205ENST00000559339 PIDD1Q9HB75 910 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 GOLGA2P5Q9HBQ8 144 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 RXFP1Q9HBX9 757 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 KIAA1586Q9HCI6 787 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 TSHZ2Q9NRE2 1034 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 EXOC1Q9NV70 894 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 CACNG4Q9UBN1 327 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 HOOK1Q9UJC3 728 aaKnown RBP4.75□□□□□ -1.65
SNX1-205ENST00000559339 CPSF3Q9UKF6 684 aaKnown RBP4.75□□□□□ -1.65
SNX1-205ENST00000559339 UBQLN1Q9UMX0 589 aaKnown RBP4.75□□□□□ -1.65
SNX1-205ENST00000559339 DERAQ9Y315 318 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 C2CD2Q9Y426 696 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 USP15Q9Y4E8 981 aaPredicted RBP4.75□□□□□ -1.65
SNX1-205ENST00000559339 STYXL1Q9Y6J8 313 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 FNDC1Q4ZHG4 1894 aaPredicted RBP4.75□□□□□ -1.65
SNX1-205ENST00000559339 ARID2Q68CP9 1835 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 BRWD1Q9NSI6 2320 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 NCOR1O75376 2440 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 COL4A4P53420 1690 aaPredicted RBP4.74□□□□□ -1.65
SNX1-205ENST00000559339 CCDC195A0A1B0GUA6 201 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 A0A1B0GVL5 298 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 A0A1W2PQ27 194 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 A0A1W2PQ64 194 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 A0A1W2PQD8 194 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 ZNF233A6NK53 670 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 LACTBL1A8MY62 500 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 TGM5O43548 720 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 EXTL3O43909 919 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 XYLBO75191 536 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 PPP1R37O75864 691 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 PRPF6O94906 941 aaKnown RBP4.74□□□□□ -1.65
SNX1-205ENST00000559339 EFEMP2O95967 443 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 MYBP10242 640 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 PFKFB1P16118 471 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 EPCAMP16422 314 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 FGFR3P22607 806 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 LRPAP1P30533 357 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 ELF1P32519 619 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 OR1D2P34982 312 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 PNPLA4P41247 253 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 TNFSF9P41273 254 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 CASP5P51878 434 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 RBM10P98175 930 aaKnown RBP4.74□□□□□ -1.65
SNX1-205ENST00000559339 YWHAHQ04917 246 aaPredicted RBP4.74□□□□□ -1.65
SNX1-205ENST00000559339 ZP2Q05996 745 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 SOX4Q06945 474 aaPredicted RBP4.74□□□□□ -1.65
SNX1-205ENST00000559339 SPAG1Q07617 926 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 KCNA1Q09470 495 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 PSMD2Q13200 908 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 TMEM132DQ14C87 1099 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 NAB2Q15742 525 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 ENOX2Q16206 610 aaKnown RBP4.74□□□□□ -1.65
SNX1-205ENST00000559339 PSMD5Q16401 504 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 KNOP1Q1ED39 458 aaKnown RBP4.74□□□□□ -1.65
SNX1-205ENST00000559339 UVSSAQ2YD98 709 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 RTP2Q5QGT7 225 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 FAM26FQ5R3K3 315 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 PPM1LQ5SGD2 360 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 RARS2Q5T160 578 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms