RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 KCNA5P22460 613 aa20.32■□□□□ 0.84
CASC4-209ENST00000559222 CYP2J2P51589 502 aa20.32■□□□□ 0.84
CASC4-209ENST00000559222 ADAM15Q13444 863 aa20.32■□□□□ 0.84
CASC4-209ENST00000559222 CLUL1Q15846 466 aa20.32■□□□□ 0.84
CASC4-209ENST00000559222 KNOP1Q1ED39 458 aaKnown RBP20.32■□□□□ 0.84
CASC4-209ENST00000559222 KIAA0319Q5VV43 1072 aa20.32■□□□□ 0.84
CASC4-209ENST00000559222 PDE12Q6L8Q7 609 aaKnown RBP20.32■□□□□ 0.84
CASC4-209ENST00000559222 PRSS55Q6UWB4 352 aaPredicted RBP20.32■□□□□ 0.84
CASC4-209ENST00000559222 EFHBQ8N7U6 833 aa20.32■□□□□ 0.84
CASC4-209ENST00000559222 CHST7Q9NS84 486 aa20.32■□□□□ 0.84
CASC4-209ENST00000559222 SF3B1O75533 1304 aaKnown RBP eCLIP20.31■□□□□ 0.84
CASC4-209ENST00000559222 PTPRJQ12913 1337 aa20.31■□□□□ 0.84
CASC4-209ENST00000559222 CARNS1A5YM72 827 aa20.31■□□□□ 0.84
CASC4-209ENST00000559222 TULP1O00294 542 aaPredicted RBP20.31■□□□□ 0.84
CASC4-209ENST00000559222 CNPP09543 421 aaKnown RBP20.31■□□□□ 0.84
CASC4-209ENST00000559222 RPL17P18621 184 aaKnown RBP20.31■□□□□ 0.84
CASC4-209ENST00000559222 GLUD2P49448 558 aa20.31■□□□□ 0.84
CASC4-209ENST00000559222 DSG1Q02413 1049 aa20.31■□□□□ 0.84
CASC4-209ENST00000559222 PSMD2Q13200 908 aa20.31■□□□□ 0.84
CASC4-209ENST00000559222 KCNC3Q14003 757 aa20.31■□□□□ 0.84
CASC4-209ENST00000559222 KCNB1Q14721 858 aa20.31■□□□□ 0.84
CASC4-209ENST00000559222 FAM171A1Q5VUB5 890 aa20.31■□□□□ 0.84
CASC4-209ENST00000559222 LMBRD2Q68DH5 695 aaPredicted RBP20.31■□□□□ 0.84
CASC4-209ENST00000559222 DCLRE1AQ6PJP8 1040 aa20.31■□□□□ 0.84
CASC4-209ENST00000559222 GPD1LQ8N335 351 aa20.31■□□□□ 0.84
CASC4-209ENST00000559222 TIGD1Q96MW7 591 aa20.31■□□□□ 0.84
CASC4-209ENST00000559222 UROC1Q96N76 676 aa20.31■□□□□ 0.84
CASC4-209ENST00000559222 PDE11AQ9HCR9 933 aa20.31■□□□□ 0.84
CASC4-209ENST00000559222 RBAKQ9NYW8 714 aaPredicted RBP20.31■□□□□ 0.84
CASC4-209ENST00000559222 CLEC1BQ9P126 229 aa20.31■□□□□ 0.84
CASC4-209ENST00000559222 UBQLN1Q9UMX0 589 aaKnown RBP20.31■□□□□ 0.84
CASC4-209ENST00000559222 PCDHA5Q9Y5H7 936 aa20.31■□□□□ 0.84
CASC4-209ENST00000559222 URODP06132 367 aa20.3■□□□□ 0.84
CASC4-209ENST00000559222 TKTP29401 623 aaKnown RBP20.3■□□□□ 0.84
CASC4-209ENST00000559222 UBE2HP62256 183 aa20.3■□□□□ 0.84
CASC4-209ENST00000559222 TMEM132DQ14C87 1099 aa20.3■□□□□ 0.84
CASC4-209ENST00000559222 SPATA1Q5VX52 437 aa20.3■□□□□ 0.84
CASC4-209ENST00000559222 KANK3Q6NY19 840 aa20.3■□□□□ 0.84
CASC4-209ENST00000559222 CLEC17AQ6ZS10 378 aa20.3■□□□□ 0.84
CASC4-209ENST00000559222 GLYCTKQ8IVS8 523 aa20.3■□□□□ 0.84
CASC4-209ENST00000559222 RDH13Q8NBN7 331 aa20.3■□□□□ 0.84
CASC4-209ENST00000559222 RIN2Q8WYP3 895 aaPredicted RBP20.3■□□□□ 0.84
CASC4-209ENST00000559222 KLHL5Q96PQ7 755 aa20.3■□□□□ 0.84
CASC4-209ENST00000559222 IRAK3Q9Y616 596 aa20.3■□□□□ 0.84
CASC4-209ENST00000559222 KINO60870 393 aaKnown RBP20.29■□□□□ 0.84
CASC4-209ENST00000559222 EPCAMP16422 314 aa20.29■□□□□ 0.84
CASC4-209ENST00000559222 LRPAP1P30533 357 aa20.29■□□□□ 0.84
CASC4-209ENST00000559222 ISM2Q6H9L7 571 aa20.29■□□□□ 0.84
CASC4-209ENST00000559222 CEP57Q86XR8 500 aa20.29■□□□□ 0.84
CASC4-209ENST00000559222 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.29■□□□□ 0.84
CASC4-209ENST00000559222 SPATA20Q8TB22 786 aa20.29■□□□□ 0.84
CASC4-209ENST00000559222 FBXL18Q96ME1 805 aa20.29■□□□□ 0.84
CASC4-209ENST00000559222 GZF1Q9H116 711 aaPredicted RBP20.29■□□□□ 0.84
CASC4-209ENST00000559222 ASB7Q9H672 318 aa20.29■□□□□ 0.84
CASC4-209ENST00000559222 MRPL17Q9NRX2 175 aaKnown RBP20.29■□□□□ 0.84
CASC4-209ENST00000559222 CDH22Q9UJ99 828 aa20.29■□□□□ 0.84
CASC4-209ENST00000559222 COG5Q9UP83 839 aa20.29■□□□□ 0.84
CASC4-209ENST00000559222 HCFC2Q9Y5Z7 792 aa20.29■□□□□ 0.84
CASC4-209ENST00000559222 TEX28O15482 410 aa20.28■□□□□ 0.84
CASC4-209ENST00000559222 ADAM12O43184 909 aa20.28■□□□□ 0.84
CASC4-209ENST00000559222 CYP3A5P20815 502 aa20.28■□□□□ 0.84
CASC4-209ENST00000559222 NDUFV1P49821 464 aa20.28■□□□□ 0.84
CASC4-209ENST00000559222 USP41Q3LFD5 358 aa20.28■□□□□ 0.84
CASC4-209ENST00000559222 CD302Q8IX05 232 aa20.28■□□□□ 0.84
CASC4-209ENST00000559222 PLEKHO2Q8TD55 490 aa20.28■□□□□ 0.84
CASC4-209ENST00000559222 SLC22A17Q8WUG5 538 aa20.28■□□□□ 0.84
CASC4-209ENST00000559222 PPP2R3CQ969Q6 453 aa20.28■□□□□ 0.84
CASC4-209ENST00000559222 DDX27Q96GQ7 796 aaKnown RBP20.28■□□□□ 0.84
CASC4-209ENST00000559222 MSLNLQ96KJ4 702 aa20.28■□□□□ 0.84
CASC4-209ENST00000559222 SPTLC1O15269 473 aa20.27■□□□□ 0.84
CASC4-209ENST00000559222 IL18RAPO95256 599 aa20.27■□□□□ 0.84
CASC4-209ENST00000559222 LDHAP00338 332 aaKnown RBP20.27■□□□□ 0.84
CASC4-209ENST00000559222 FGFR3P22607 806 aa20.27■□□□□ 0.84
CASC4-209ENST00000559222 RPL9P32969 192 aaKnown RBP20.27■□□□□ 0.84
CASC4-209ENST00000559222 CASP4P49662 377 aa20.27■□□□□ 0.84
CASC4-209ENST00000559222 C9orf57Q5W0N0 161 aa20.27■□□□□ 0.84
CASC4-209ENST00000559222 KIAA1841Q6NSI8 718 aa20.27■□□□□ 0.84
CASC4-209ENST00000559222 RSPO2Q6UXX9 243 aaPredicted RBP20.27■□□□□ 0.84
CASC4-209ENST00000559222 HS2ST1Q7LGA3 356 aa20.27■□□□□ 0.84
CASC4-209ENST00000559222 C12orf56Q8IXR9 622 aa20.27■□□□□ 0.84
CASC4-209ENST00000559222 BEST2Q8NFU1 509 aa20.27■□□□□ 0.84
CASC4-209ENST00000559222 OR5B17Q8NGF7 314 aa20.27■□□□□ 0.84
CASC4-209ENST00000559222 LNX1Q8TBB1 728 aaPredicted RBP20.27■□□□□ 0.84
CASC4-209ENST00000559222 SMARCE1Q969G3 411 aa20.27■□□□□ 0.84
CASC4-209ENST00000559222 CCDC47Q96A33 483 aaKnown RBP20.27■□□□□ 0.84
CASC4-209ENST00000559222 CDCA3Q99618 268 aaPredicted RBP20.27■□□□□ 0.84
CASC4-209ENST00000559222 TTPALQ9BTX7 342 aa20.27■□□□□ 0.84
CASC4-209ENST00000559222 APOL5Q9BWW9 433 aa20.27■□□□□ 0.84
CASC4-209ENST00000559222 RXFP1Q9HBX9 757 aa20.27■□□□□ 0.84
CASC4-209ENST00000559222 LMBRD1Q9NUN5 540 aa20.27■□□□□ 0.84
CASC4-209ENST00000559222 MAN1B1Q9UKM7 699 aa20.27■□□□□ 0.84
CASC4-209ENST00000559222 DERAQ9Y315 318 aa20.27■□□□□ 0.84
CASC4-209ENST00000559222 C2CD2Q9Y426 696 aa20.27■□□□□ 0.84
CASC4-209ENST00000559222 C2orf16Q68DN1 1984 aa20.26■□□□□ 0.83
CASC4-209ENST00000559222 MTCL1Q9Y4B5 1905 aaKnown RBP20.26■□□□□ 0.83
CASC4-209ENST00000559222 ANO9A1A5B4 782 aa20.26■□□□□ 0.83
CASC4-209ENST00000559222 MCM4P33991 863 aa20.26■□□□□ 0.83
CASC4-209ENST00000559222 TFAMQ00059 246 aaKnown RBP20.26■□□□□ 0.83
CASC4-209ENST00000559222 SNRNP35Q16560 246 aaKnown RBP20.26■□□□□ 0.83
CASC4-209ENST00000559222 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms