RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 SEPT8Q92599 483 aa17.12■□□□□ 0.33
CDC42BPB-204ENST00000559043 SYN2Q92777 582 aaPredicted RBP17.12■□□□□ 0.33
CDC42BPB-204ENST00000559043 FAM213AQ9BRX8 229 aa17.12■□□□□ 0.33
CDC42BPB-204ENST00000559043 NUCKS1Q9H1E3 243 aaKnown RBP17.12■□□□□ 0.33
CDC42BPB-204ENST00000559043 NXF3Q9H4D5 531 aaKnown RBP17.12■□□□□ 0.33
CDC42BPB-204ENST00000559043 RGS18Q9NS28 235 aa17.12■□□□□ 0.33
CDC42BPB-204ENST00000559043 CEP72Q9P209 647 aa17.12■□□□□ 0.33
CDC42BPB-204ENST00000559043 PRKAG2Q9UGJ0 569 aa17.12■□□□□ 0.33
CDC42BPB-204ENST00000559043 LTBP2Q14767 1821 aa17.12■□□□□ 0.33
CDC42BPB-204ENST00000559043 C9IYK1 514 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 CETN3O15182 167 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 ADRB2P07550 413 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 MCF2P10911 925 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 ATF7P17544 494 aaPredicted RBP17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 RFC2P35250 354 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 KIF11P52732 1056 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 CYP27A1Q02318 531 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 KIF5AQ12840 1032 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 MAPK8IP2Q13387 824 aaPredicted RBP17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 ASTE1Q2TB18 679 aaPredicted RBP17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 CC2D1AQ6P1N0 951 aaPredicted RBP17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 BORCS6Q96GS4 357 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 TRAIPQ9BWF2 469 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 TSPYL2Q9H2G4 693 aaPredicted RBP17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 ANKZF1Q9H8Y5 726 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 FAM105AQ9NUU6 356 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 PCDHB2Q9Y5E7 798 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 CEP290O15078 2479 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 SSU72P8A0A1W2PR75 194 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 ANO9A1A5B4 782 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 CTAGE15A4D2H0 777 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 OGTO15294 1046 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 CTAGE8P0CG41 777 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 EIF4A3P38919 411 aaKnown RBP17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 FAM189BP81408 668 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 CTAGE6Q86UF2 777 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 CTAGE4Q8IX94 777 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 XXYLT1Q8NBI6 393 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 PLEKHO2Q8TD55 490 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 IL23AQ9NPF7 189 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 RNF19AQ9NV58 838 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 RAB21Q9UL25 225 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 IPPQ9Y573 584 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 PCDHA13Q9Y5I0 950 aa17.11■□□□□ 0.33
CDC42BPB-204ENST00000559043 A0A0U1RQF3 1178 aa17.1■□□□□ 0.33
CDC42BPB-204ENST00000559043 CCDC151A5D8V7 595 aa17.1■□□□□ 0.33
CDC42BPB-204ENST00000559043 EXOC3O60645 756 aa17.1■□□□□ 0.33
CDC42BPB-204ENST00000559043 ATP1A1P05023 1023 aaKnown RBP17.1■□□□□ 0.33
CDC42BPB-204ENST00000559043 STAG3L1P0CL83 205 aa17.1■□□□□ 0.33
CDC42BPB-204ENST00000559043 AKAP5P24588 427 aa17.1■□□□□ 0.33
CDC42BPB-204ENST00000559043 MYBPC2Q14324 1141 aa17.1■□□□□ 0.33
CDC42BPB-204ENST00000559043 BRD3Q15059 726 aa17.1■□□□□ 0.33
CDC42BPB-204ENST00000559043 HGSNATQ68CP4 663 aa17.1■□□□□ 0.33
CDC42BPB-204ENST00000559043 CACNA2D4Q7Z3S7 1137 aa17.1■□□□□ 0.33
CDC42BPB-204ENST00000559043 FRMD5Q7Z6J6 570 aa17.1■□□□□ 0.33
CDC42BPB-204ENST00000559043 CRIPAKQ8N1N5 446 aa17.1■□□□□ 0.33
CDC42BPB-204ENST00000559043 LPPQ93052 612 aa17.1■□□□□ 0.33
CDC42BPB-204ENST00000559043 SNTG2Q9NY99 539 aa17.1■□□□□ 0.33
CDC42BPB-204ENST00000559043 CPSF3Q9UKF6 684 aaKnown RBP17.1■□□□□ 0.33
CDC42BPB-204ENST00000559043 EXTL3O43909 919 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 RPL13P26373 211 aaKnown RBP17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 AFF1P51825 1210 aaKnown RBP17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 FPGSQ05932 587 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 ENOX2Q16206 610 aaKnown RBP17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 CNKSR3Q6P9H4 555 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 MRPL10Q7Z7H8 261 aaKnown RBP17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 GPD1LQ8N335 351 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 FAM84AQ96KN4 292 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 ADPGKQ9BRR6 497 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 SAR1BQ9Y6B6 198 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 DUSP10Q9Y6W6 482 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 ZNF623O75123 536 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 IBSPP21815 317 aaPredicted RBP17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 GRM5P41594 1212 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 SNRNP35Q16560 246 aaKnown RBP17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 SLC10A6Q3KNW5 377 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 DCAF4L1Q3SXM0 396 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 ZNF365Q70YC5 407 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 SLC24A5Q71RS6 500 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 ZNF598Q86UK7 904 aaKnown RBP17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 ECHDC2Q86YB7 292 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 HNRNPLLQ8WVV9 542 aaKnown RBP17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 APBB2Q92870 758 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 SECISBP2LQ93073 1101 aaKnown RBP17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 APOL6Q9BWW8 343 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 FTHL17Q9BXU8 183 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 ARFGAP3Q9NP61 516 aa17.09■□□□□ 0.33
CDC42BPB-204ENST00000559043 RANBP2P49792 3224 aaKnown RBP17.08■□□□□ 0.33
CDC42BPB-204ENST00000559043 ENC1O14682 589 aa17.08■□□□□ 0.33
CDC42BPB-204ENST00000559043 PJA2O43164 708 aa17.08■□□□□ 0.33
CDC42BPB-204ENST00000559043 CAPN15O75808 1086 aa17.08■□□□□ 0.33
CDC42BPB-204ENST00000559043 SEC31AO94979 1220 aaKnown RBP17.08■□□□□ 0.33
CDC42BPB-204ENST00000559043 RGS19P49795 217 aa17.08■□□□□ 0.33
CDC42BPB-204ENST00000559043 TMEM240Q5SV17 173 aa17.08■□□□□ 0.33
CDC42BPB-204ENST00000559043 AGMOQ6ZNB7 445 aa17.08■□□□□ 0.33
CDC42BPB-204ENST00000559043 OTOP2Q7RTS6 562 aa17.08■□□□□ 0.33
CDC42BPB-204ENST00000559043 RPUSD2Q8IZ73 545 aaKnown RBP17.08■□□□□ 0.33
CDC42BPB-204ENST00000559043 TMEM130Q8N3G9 435 aa17.08■□□□□ 0.33
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