RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, human

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABPB1-208	ENST00000558970	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.45	□□□□□ -0.26
GABPB1-208	ENST00000558970	COLGALT2	Q8IYK4	626 aa		13.45	□□□□□ -0.26
GABPB1-208	ENST00000558970	COLGALT1	Q8NBJ5	622 aa		13.45	□□□□□ -0.26
GABPB1-208	ENST00000558970	BEST2	Q8NFU1	509 aa		13.45	□□□□□ -0.26
GABPB1-208	ENST00000558970	PARD3B	Q8TEW8	1205 aa		13.45	□□□□□ -0.26
GABPB1-208	ENST00000558970	ARNTL2	Q8WYA1	636 aa		13.45	□□□□□ -0.26
GABPB1-208	ENST00000558970	ELMO3	Q96BJ8	720 aa		13.45	□□□□□ -0.26
GABPB1-208	ENST00000558970	ANKRD36BP1	Q96IX9	119 aa		13.45	□□□□□ -0.26
GABPB1-208	ENST00000558970	CEP63	Q96MT8	703 aa		13.45	□□□□□ -0.26
GABPB1-208	ENST00000558970	FAM161B	Q96MY7	647 aa		13.45	□□□□□ -0.26
GABPB1-208	ENST00000558970	ZNF558	Q96NG5	402 aa		13.45	□□□□□ -0.26
GABPB1-208	ENST00000558970	TSPY26P	Q9H489	355 aa		13.45	□□□□□ -0.26
GABPB1-208	ENST00000558970	ASB7	Q9H672	318 aa		13.45	□□□□□ -0.26
GABPB1-208	ENST00000558970	SLC38A7	Q9NVC3	462 aa		13.45	□□□□□ -0.26
GABPB1-208	ENST00000558970	FANCL	Q9NW38	375 aa		13.45	□□□□□ -0.26
GABPB1-208	ENST00000558970	DPP3	Q9NY33	737 aa		13.45	□□□□□ -0.26
GABPB1-208	ENST00000558970	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.45	□□□□□ -0.26
GABPB1-208	ENST00000558970	TSC2	P49815	1807 aa		13.45	□□□□□ -0.26
GABPB1-208	ENST00000558970		I3L4J1	428 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	PES1	O00541	588 aa	Known RBP	13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	PODXL	O00592	558 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	INPPL1	O15357	1258 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	XPOT	O43592	962 aa	Known RBP	13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	KIF4A	O95239	1232 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	FGFR1OP	O95684	399 aa	Known RBP	13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	TNNC2	P02585	160 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	ITGB1	P05556	798 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	GALT	P07902	379 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	LAG3	P18627	525 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	MTIF2	P46199	727 aa	Known RBP	13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	GCLM	P48507	274 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	ALDH7A1	P49419	539 aa	Known RBP	13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	DSC1	Q08554	894 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	SURF1	Q15526	300 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	INTS8	Q75QN2	995 aa	Known RBP	13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	FILIP1	Q7Z7B0	1213 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	LUZP1	Q86V48	1076 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	WDR49	Q8IV35	697 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	DHX40	Q8IX18	779 aa	Known RBP	13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	RNF214	Q8ND24	703 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	C3orf58	Q8NDZ4	430 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	ENOX1	Q8TC92	643 aa	Known RBP	13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	ZNF516	Q92618	1163 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	MKNK1	Q9BUB5	465 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	CBX8	Q9HC52	389 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	INTS13	Q9NVM9	706 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	CHD7	Q9P2D1	2997 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	FAN1	Q9Y2M0	1017 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	C2CD2	Q9Y426	696 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	PCDHB12	Q9Y5F1	795 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	VWA8	A3KMH1	1905 aa		13.44	□□□□□ -0.26
GABPB1-208	ENST00000558970	BECN2	A8MW95	431 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	KCNJ18	B7U540	433 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	RFXAP	O00287	272 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	PHACTR2	O75167	634 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	ALDH2	P05091	517 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	LINC00271	P0C7V0	271 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	POLR2B	P30876	1174 aa	Known RBP	13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	CA8	P35219	290 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	KCNJ12	Q14500	433 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	EPC2	Q52LR7	807 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	C1orf220	Q5T0J3	134 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	C1orf127	Q8N9H9	656 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	KLHL23	Q8NBE8	558 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	FBXO22	Q8NEZ5	403 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	GDPD5	Q8WTR4	605 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	CACTIN	Q8WUQ7	758 aa	Known RBP	13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	GUCD1	Q96NT3	240 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	TGS1	Q96RS0	853 aa	Known RBP	13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	THAP9	Q9H5L6	903 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	ALG13	Q9NP73	1137 aa	Known RBP	13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	AAAS	Q9NRG9	546 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	AGAP1	Q9UPQ3	857 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	DERA	Q9Y315	318 aa		13.43	□□□□□ -0.26
GABPB1-208	ENST00000558970	EPOP	A6NHQ4	379 aa		13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	MAPK13	O15264	365 aa		13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	PRKCSH	P14314	528 aa	Predicted RBP	13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	PIK3CA	P42336	1068 aa		13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	BRCC3	P46736	316 aa		13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	PPP3CA	Q08209	521 aa		13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	NCAPH	Q15003	741 aa		13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	ZBTB6	Q15916	424 aa		13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	UPP1	Q16831	310 aa		13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	DUOXA2	Q1HG44	320 aa		13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	TDRD10	Q5VZ19	366 aa	Known RBP	13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	TRAPPC11	Q7Z392	1133 aa		13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	FRMD5	Q7Z6J6	570 aa		13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	USP37	Q86T82	979 aa		13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	IRF2BP1	Q8IU81	584 aa		13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	FAM114A1	Q8IWE2	563 aa		13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	TMC2	Q8TDI7	906 aa		13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	TMEM174	Q8WUU8	243 aa		13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	CLP1	Q92989	425 aa	Known RBP	13.42	□□□□□ -0.26
GABPB1-208	ENST00000558970	BORCS6	Q96GS4	357 aa		13.42	□□□□□ -0.26

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