RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 KCNG1Q9UIX4 513 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 DOCK8Q8NF50 2099 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 MYO10Q9HD67 2058 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 CUL9Q8IWT3 2517 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 C19orf67A6NJJ6 358 aa13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 H0YCG3 227 aa13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 PODXLO00592 558 aa13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 NRG2O14511 850 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 ZNF202O95125 648 aa13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 PAPLNO95428 1278 aa13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 VNN2O95498 520 aa13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 SPATA31D3P0C874 917 aa13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 LRPAP1P30533 357 aa13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 AARSP49588 968 aaKnown RBP eCLIP13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 NUCB2P80303 420 aa13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 MRPL58Q14197 206 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 SMAD2Q15796 467 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 BMT2Q1RMZ1 405 aa13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 FAM26FQ5R3K3 315 aa13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 FAM171A1Q5VUB5 890 aa13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 DCLRE1AQ6PJP8 1040 aa13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 SPATA31D4Q6ZUB0 917 aa13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 BICD1Q96G01 975 aa13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 DDX27Q96GQ7 796 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 UHRF1Q96T88 793 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 SCAND2PQ9GZW5 306 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 FAM13BQ9NYF5 915 aa13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 AGO2Q9UKV8 859 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 BDP1A6H8Y1 2624 aa13.77□□□□□ -0.21
RABGGTA-207ENST00000558936 PVALEFA0A1B0GWK0 134 aa13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 ANO9A1A5B4 782 aa13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 PIRO00625 290 aa13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 B3GAT3O94766 335 aa13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 SYKP43405 635 aa13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 GLUD2P49448 558 aa13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 PUS10Q3MIT2 529 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 SPATA1Q5VX52 437 aa13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 CBWD2Q8IUF1 395 aa13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 GLYCTKQ8IVS8 523 aa13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 CCDC65Q8IXS2 484 aa13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 RIN2Q8WYP3 895 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 FBXL18Q96ME1 805 aa13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 ACCSQ96QU6 501 aa13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 CDCA3Q99618 268 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 KCTD10Q9H3F6 313 aa13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 PLEKHA5Q9HAU0 1116 aa13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 CD207Q9UJ71 328 aa13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 USP15Q9Y4E8 981 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-207ENST00000558936 CLIC2O15247 247 aa13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 TGM5O43548 720 aa13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 NR1I2O75469 434 aa13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 TADA2AO75478 443 aa13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 RFPL2O75678 378 aa13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 NDUFV1P49821 464 aa13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 ZP2Q05996 745 aa13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 USP41Q3LFD5 358 aa13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 NELFCDQ8IXH7 590 aa13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 PIK3R5Q8WYR1 880 aa13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 ZNF516Q92618 1163 aa13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 ZNF707Q96C28 371 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 KIF12Q96FN5 646 aa13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 RTP3Q9BQQ7 232 aa13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 FAM213AQ9BRX8 229 aa13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 MAGEF1Q9HAY2 307 aa13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 AGPAT3Q9NRZ7 376 aa13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 SIX4Q9UIU6 781 aa13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 PCDHB13Q9Y5F0 798 aa13.75□□□□□ -0.21
RABGGTA-207ENST00000558936 TNFRSF10AO00220 468 aa13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 EIF3DO15371 548 aaKnown RBP eCLIP13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 N4BP1O75113 896 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 GARTP22102 1010 aa13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 SCP2P22307 547 aa13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 YARSP54577 528 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 SMAD4Q13485 552 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 PNOCQ13519 176 aa13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 C9orf57Q5W0N0 161 aa13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 LMBRD2Q68DH5 695 aaPredicted RBP13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 APBB1IPQ7Z5R6 666 aaPredicted RBP13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 PALB2Q86YC2 1186 aa13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 BRSK2Q8IWQ3 736 aa13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 OR5B17Q8NGF7 314 aa13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 SPATA20Q8TB22 786 aa13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 POMGNT1Q8WZA1 660 aa13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 SUSD3Q96L08 255 aa13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 RPF1Q9H9Y2 349 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 PDE11AQ9HCR9 933 aa13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 MRPL17Q9NRX2 175 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 TOPORSQ9NS56 1045 aaPredicted RBP13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 DMAC2Q9NW81 257 aa13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 FNIP2Q9P278 1114 aa13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 TIMM13Q9Y5L4 95 aaPredicted RBP13.74□□□□□ -0.21
RABGGTA-207ENST00000558936 FSD2A1L4K1 749 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 M0QZQ0 153 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 RPN1P04843 607 aaKnown RBP13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 CYP3A5P20815 502 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 BMP6P22004 513 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 MATR3P43243 847 aaKnown RBP eCLIP13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 C1orf220Q5T0J3 134 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 SLFN12LQ6IEE8 588 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 CEP57Q86XR8 500 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms