RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	USP20	Q9Y2K6	914 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	ARL5C	A6NH57	179 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	NRP1	O14786	923 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	ASAP2	O43150	1006 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	NEMF	O60524	1076 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	USO1	O60763	962 aa	Known RBP	7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	MED24	O75448	989 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	ERLIN2	O94905	339 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	LYPLA2	O95372	231 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	PROC	P04070	461 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	ALDH2	P05091	517 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	FAM157B	P0CG42	384 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	SPATA31C1	P0DKV0	1188 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	SRGAP2B	P0DMP2	458 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	CTSA	P10619	480 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	ITGA4	P13612	1032 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	ARF4	P18085	180 aa	Predicted RBP	7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	GLRA2	P23416	452 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	AKAP5	P24588	427 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	COL8A1	P27658	744 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	ARL2	P36404	184 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	MLH1	P40692	756 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	RARRES1	P49788	294 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	PTEN	P60484	403 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	MBTD1	Q05BQ5	628 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	TRIM29	Q14134	588 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	PTPN14	Q15678	1187 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	TMC5	Q6UXY8	1006 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	EXOC8	Q8IYI6	725 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	TMEM87A	Q8NBN3	555 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	URGCP	Q8TCY9	931 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	RABGGTA	Q92696	567 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	CASP10	Q92851	521 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	PBXIP1	Q96AQ6	731 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	B3GALT6	Q96L58	329 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	FAM193B	Q96PV7	902 aa	Predicted RBP	7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	GAD1	Q99259	594 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	POLR3F	Q9H1D9	316 aa	Predicted RBP	7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	ADAM7	Q9H2U9	754 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	NXF3	Q9H4D5	531 aa	Known RBP	7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	POMK	Q9H5K3	350 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	ANKEF1	Q9NU02	776 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	ZNF358	Q9NW07	568 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	KLK14	Q9P0G3	267 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	MARK1	Q9P0L2	795 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	CACNG4	Q9UBN1	327 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	LIMCH1	Q9UPQ0	1083 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	FAN1	Q9Y2M0	1017 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	PRG3	Q9Y2Y8	225 aa	Predicted RBP	7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	PPME1	Q9Y570	386 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	IPP	Q9Y573	584 aa		7.76	□□□□□ -1.17
MARK3-215	ENST00000558787	ZNF318	Q5VUA4	2279 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	C2CD4D	B7Z1M9	353 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	NPTXR	O95502	500 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	PDGFB	P01127	241 aa	Predicted RBP	7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	ASGR2	P07307	311 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	CNP	P09543	421 aa	Known RBP	7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	SPATA31D3	P0C874	917 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	HOXB8	P17481	243 aa	Predicted RBP	7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	HOXB4	P17483	251 aa	Predicted RBP	7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	NCL	P19338	710 aa	Known RBP	7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	KLRC2	P26717	231 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	OR1G1	P47890	313 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	SCNN1G	P51170	649 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	MXD4	Q14582	209 aa	Predicted RBP	7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	TEAD4	Q15561	434 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	PTPN21	Q16825	1174 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	SAMD5	Q5TGI4	173 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	CES5A	Q6NT32	575 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	SPATA31D4	Q6ZUB0	917 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	CATSPER3	Q86XQ3	398 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	DEPDC4	Q8N2C3	294 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	C8orf76	Q96K31	380 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	MFSD14A	Q96MC6	490 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	CCDC43	Q96MW1	224 aa	Known RBP	7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	TBC1D32	Q96NH3	1257 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	KLHL5	Q96PQ7	755 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	CSRNP2	Q9H175	543 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	CXCL16	Q9H2A7	254 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	SUV39H2	Q9H5I1	410 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	MARCH5	Q9NX47	278 aa		7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	NOP53	Q9NZM5	478 aa	Known RBP	7.75	□□□□□ -1.17
MARK3-215	ENST00000558787	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	7.74	□□□□□ -1.17
MARK3-215	ENST00000558787	FSD2	A1L4K1	749 aa		7.74	□□□□□ -1.17
MARK3-215	ENST00000558787	LRRIQ4	A6NIV6	560 aa		7.74	□□□□□ -1.17
MARK3-215	ENST00000558787	GAS2	O43903	313 aa	Known RBP	7.74	□□□□□ -1.17
MARK3-215	ENST00000558787	ADAM23	O75077	832 aa		7.74	□□□□□ -1.17
MARK3-215	ENST00000558787	LIG1	P18858	919 aa		7.74	□□□□□ -1.17
MARK3-215	ENST00000558787	NOS2	P35228	1153 aa		7.74	□□□□□ -1.17
MARK3-215	ENST00000558787	TXLNA	P40222	546 aa		7.74	□□□□□ -1.17
MARK3-215	ENST00000558787	RBM25	P49756	843 aa	Known RBP	7.74	□□□□□ -1.17
MARK3-215	ENST00000558787	VCP	P55072	806 aa	Known RBP	7.74	□□□□□ -1.17
MARK3-215	ENST00000558787	NHLH1	Q02575	133 aa		7.74	□□□□□ -1.17
MARK3-215	ENST00000558787	TFDP1	Q14186	410 aa		7.74	□□□□□ -1.17
MARK3-215	ENST00000558787	BMS1	Q14692	1282 aa	Known RBP	7.74	□□□□□ -1.17
MARK3-215	ENST00000558787	SAFB	Q15424	915 aa	Known RBP eCLIP	7.74	□□□□□ -1.17
MARK3-215	ENST00000558787	ECM1	Q16610	540 aa		7.74	□□□□□ -1.17
MARK3-215	ENST00000558787	ATAT1	Q5SQI0	421 aa		7.74	□□□□□ -1.17
MARK3-215	ENST00000558787	NOTUM	Q6P988	496 aa		7.74	□□□□□ -1.17
MARK3-215	ENST00000558787	CHSY3	Q70JA7	882 aa		7.74	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms