RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 CPA4Q9UI42 421 aa11.39□□□□□ -0.59
MARK3-213ENST00000558611 DUSP13Q9UII6 198 aa11.39□□□□□ -0.59
MARK3-213ENST00000558611 INVSQ9Y283 1065 aa11.39□□□□□ -0.59
MARK3-213ENST00000558611 PLXNA1Q9UIW2 1896 aa11.38□□□□□ -0.59
MARK3-213ENST00000558611 TMEM82A0PJX8 343 aa11.38□□□□□ -0.59
MARK3-213ENST00000558611 ANO9A1A5B4 782 aa11.38□□□□□ -0.59
MARK3-213ENST00000558611 DVL2O14641 736 aa11.38□□□□□ -0.59
MARK3-213ENST00000558611 XPOTO43592 962 aaKnown RBP11.38□□□□□ -0.59
MARK3-213ENST00000558611 ASGR2P07307 311 aa11.38□□□□□ -0.59
MARK3-213ENST00000558611 KRT15P19012 456 aa11.38□□□□□ -0.59
MARK3-213ENST00000558611 CLCN7P51798 805 aa11.38□□□□□ -0.59
MARK3-213ENST00000558611 CAP1Q01518 475 aa11.38□□□□□ -0.59
MARK3-213ENST00000558611 MCMDC2Q4G0Z9 681 aa11.38□□□□□ -0.59
MARK3-213ENST00000558611 ARHGAP36Q6ZRI8 547 aa11.38□□□□□ -0.59
MARK3-213ENST00000558611 NOSTRINQ8IVI9 506 aa11.38□□□□□ -0.59
MARK3-213ENST00000558611 CMIPQ8IY22 773 aa11.38□□□□□ -0.59
MARK3-213ENST00000558611 SMCR8Q8TEV9 937 aaPredicted RBP11.38□□□□□ -0.59
MARK3-213ENST00000558611 DPF3Q92784 378 aa11.38□□□□□ -0.59
MARK3-213ENST00000558611 C12orf42Q96LP6 360 aa11.38□□□□□ -0.59
MARK3-213ENST00000558611 KIAA1683Q9H0B3 1180 aa11.38□□□□□ -0.59
MARK3-213ENST00000558611 NAPBQ9H115 298 aa11.38□□□□□ -0.59
MARK3-213ENST00000558611 ZSWIM5Q9P217 1185 aa11.38□□□□□ -0.59
MARK3-213ENST00000558611 TRIM17Q9Y577 477 aa11.38□□□□□ -0.59
MARK3-213ENST00000558611 CCDC171Q6TFL3 1326 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 CNTNAP5Q8WYK1 1306 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 BRCA2P51587 3418 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 MYH6P13533 1939 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 WASH4PA8MWX3 477 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 HIP1RO75146 1068 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 GSPT1P15170 499 aaKnown RBP11.37□□□□□ -0.59
MARK3-213ENST00000558611 AKAP5P24588 427 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 HOXA7P31268 230 aaPredicted RBP11.37□□□□□ -0.59
MARK3-213ENST00000558611 USP14P54578 494 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 KIF22Q14807 665 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 ARHGEF6Q15052 776 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 ARHGAP29Q52LW3 1261 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 VPS53Q5VIR6 699 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 HLA-DQA1Q5Y7H0 255 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 FBXO46Q6PJ61 603 aaPredicted RBP11.37□□□□□ -0.59
MARK3-213ENST00000558611 FRMD7Q6ZUT3 714 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 CEP68Q76N32 757 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 TMPRSS7Q7RTY8 843 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 ZNF589Q86UQ0 364 aaPredicted RBP11.37□□□□□ -0.59
MARK3-213ENST00000558611 SPACA3Q8IXA5 215 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 ZZZ3Q8IYH5 903 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 ACER1Q8TDN7 264 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 ARHGAP39Q9C0H5 1083 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 ACSS2Q9NR19 701 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 MAN1C1Q9NR34 630 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 ERVK13-1Q9NX77 482 aa11.37□□□□□ -0.59
MARK3-213ENST00000558611 ZMYM6O95789 1325 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 A0A1W2PRG0 241 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 FAM170BA6NMN3 283 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 HIP1O00291 1037 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 H2AFYO75367 372 aaKnown RBP11.36□□□□□ -0.59
MARK3-213ENST00000558611 COL8A1P27658 744 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 KIF11P52732 1056 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 IRX3P78415 501 aaPredicted RBP11.36□□□□□ -0.59
MARK3-213ENST00000558611 ICA1Q05084 483 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 PPARAQ07869 468 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 DHX8Q14562 1220 aaKnown RBP11.36□□□□□ -0.59
MARK3-213ENST00000558611 GRM3Q14832 879 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 ALX1Q15699 326 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 RRP12Q5JTH9 1297 aaKnown RBP11.36□□□□□ -0.59
MARK3-213ENST00000558611 CENPQQ7L2Z9 268 aaPredicted RBP11.36□□□□□ -0.59
MARK3-213ENST00000558611 OTOP3Q7RTS5 596 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 ALYREFQ86V81 257 aaKnown RBP11.36□□□□□ -0.59
MARK3-213ENST00000558611 STK11IPQ8N1F8 1099 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 UBE2FQ969M7 185 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 FCRL2Q96LA5 508 aaPredicted RBP11.36□□□□□ -0.59
MARK3-213ENST00000558611 HSPA12BQ96MM6 686 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 ACAP3Q96P50 834 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 ARPC5LQ9BPX5 153 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 SSBP4Q9BWG4 385 aaPredicted RBP11.36□□□□□ -0.59
MARK3-213ENST00000558611 EPB41L1Q9H4G0 881 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 C7orf69Q9H7B7 122 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 ZNF287Q9HBT7 754 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 DIAPH3Q9NSV4 1193 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 X6R8D5 127 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 ZNF236Q9UL36 1845 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 PLIN4Q96Q06 1357 aa11.36□□□□□ -0.59
MARK3-213ENST00000558611 FRMPD3Q5JV73 1810 aa11.35□□□□□ -0.59
MARK3-213ENST00000558611 H3BS24 57 aa11.35□□□□□ -0.59
MARK3-213ENST00000558611 ZRANB2O95218 330 aaKnown RBP eCLIP11.35□□□□□ -0.59
MARK3-213ENST00000558611 CYP17A1P05093 508 aa11.35□□□□□ -0.59
MARK3-213ENST00000558611 SLC3A2P08195 630 aaKnown RBP11.35□□□□□ -0.59
MARK3-213ENST00000558611 HSPD1P10809 573 aaKnown RBP11.35□□□□□ -0.59
MARK3-213ENST00000558611 CD40P25942 277 aa11.35□□□□□ -0.59
MARK3-213ENST00000558611 CTGFP29279 349 aa11.35□□□□□ -0.59
MARK3-213ENST00000558611 GCLCP48506 637 aaPredicted RBP11.35□□□□□ -0.59
MARK3-213ENST00000558611 SAFBQ15424 915 aaKnown RBP eCLIP11.35□□□□□ -0.59
MARK3-213ENST00000558611 FAM110CQ1W6H9 321 aa11.35□□□□□ -0.59
MARK3-213ENST00000558611 PTRH1Q86Y79 214 aaKnown RBP11.35□□□□□ -0.59
MARK3-213ENST00000558611 SIAH1Q8IUQ4 282 aa11.35□□□□□ -0.59
MARK3-213ENST00000558611 TMEM52Q8NDY8 209 aa11.35□□□□□ -0.59
MARK3-213ENST00000558611 TRMT2BQ96GJ1 504 aaKnown RBP11.35□□□□□ -0.59
MARK3-213ENST00000558611 TEKT5Q96M29 485 aa11.35□□□□□ -0.59
MARK3-213ENST00000558611 LRGUKQ96M69 825 aa11.35□□□□□ -0.59
MARK3-213ENST00000558611 SH2D4AQ9H788 454 aa11.35□□□□□ -0.59
MARK3-213ENST00000558611 ZMAT4Q9H898 229 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms