RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 CLDN3O15551 220 aa16.97■□□□□ 0.31
TPM1-211ENST00000558314 TOM1L1O75674 476 aa16.97■□□□□ 0.31
TPM1-211ENST00000558314 DCNP07585 359 aaKnown RBP16.97■□□□□ 0.31
TPM1-211ENST00000558314 CXCL8P10145 99 aa16.97■□□□□ 0.31
TPM1-211ENST00000558314 MAPTP10636 758 aaKnown RBP16.97■□□□□ 0.31
TPM1-211ENST00000558314 PROZP22891 400 aa16.97■□□□□ 0.31
TPM1-211ENST00000558314 GPC5P78333 572 aa16.97■□□□□ 0.31
TPM1-211ENST00000558314 ROR1Q01973 937 aa16.97■□□□□ 0.31
TPM1-211ENST00000558314 ANGPT1Q15389 498 aa16.97■□□□□ 0.31
TPM1-211ENST00000558314 CTXN3Q4LDR2 81 aa16.97■□□□□ 0.31
TPM1-211ENST00000558314 CCDC105Q8IYK2 499 aa16.97■□□□□ 0.31
TPM1-211ENST00000558314 MYCT1Q8N699 235 aa16.97■□□□□ 0.31
TPM1-211ENST00000558314 SPIRE2Q8WWL2 714 aa16.97■□□□□ 0.31
TPM1-211ENST00000558314 FAM212AQ96EL1 285 aa16.97■□□□□ 0.31
TPM1-211ENST00000558314 MCRS1Q96EZ8 462 aa16.97■□□□□ 0.31
TPM1-211ENST00000558314 CYP4F11Q9HBI6 524 aa16.97■□□□□ 0.31
TPM1-211ENST00000558314 CNTN3Q9P232 1028 aa16.97■□□□□ 0.31
TPM1-211ENST00000558314 TUBGCP4Q9UGJ1 667 aa16.97■□□□□ 0.31
TPM1-211ENST00000558314 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.97■□□□□ 0.31
TPM1-211ENST00000558314 DOCK6Q96HP0 2047 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 VPS37CA5D8V6 355 aaPredicted RBP16.96■□□□□ 0.31
TPM1-211ENST00000558314 H7C4K7 107 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 K7ENM7 598 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 ABLIM1O14639 778 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 FAM13AO94988 1023 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 KCNE1P15382 129 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 MARCKSP29966 332 aaPredicted RBP16.96■□□□□ 0.31
TPM1-211ENST00000558314 HOXA9P31269 272 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 LIG4P49917 911 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 UVSSAQ2YD98 709 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 TMEM119Q4V9L6 283 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 XKR4Q5GH76 650 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 HYIQ5T013 277 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 MTSS1LQ765P7 747 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 ASCL5Q7RTU5 278 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 KIF12Q96FN5 646 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 CORO1BQ9BR76 489 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 FOXQ1Q9C009 403 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 LARSQ9P2J5 1176 aaKnown RBP16.96■□□□□ 0.31
TPM1-211ENST00000558314 KCNG1Q9UIX4 513 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 ZFP37Q9Y6Q3 630 aaPredicted RBP16.96■□□□□ 0.31
TPM1-211ENST00000558314 DOCK8Q8NF50 2099 aa16.96■□□□□ 0.31
TPM1-211ENST00000558314 ZFHX2Q9C0A1 2572 aaPredicted RBP16.96■□□□□ 0.31
TPM1-211ENST00000558314 WDR27A2RRH5 827 aa16.95■□□□□ 0.3
TPM1-211ENST00000558314 MEFVO15553 781 aaPredicted RBP16.95■□□□□ 0.3
TPM1-211ENST00000558314 RHOP08100 348 aa16.95■□□□□ 0.3
TPM1-211ENST00000558314 RPL9P32969 192 aaKnown RBP16.95■□□□□ 0.3
TPM1-211ENST00000558314 MCM2P49736 904 aa16.95■□□□□ 0.3
TPM1-211ENST00000558314 SNW1Q13573 536 aaKnown RBP16.95■□□□□ 0.3
TPM1-211ENST00000558314 MCM6Q14566 821 aa16.95■□□□□ 0.3
TPM1-211ENST00000558314 SLC10A6Q3KNW5 377 aa16.95■□□□□ 0.3
TPM1-211ENST00000558314 ARSHQ5FYA8 562 aa16.95■□□□□ 0.3
TPM1-211ENST00000558314 ARL6IP4Q66PJ3 421 aaKnown RBP16.95■□□□□ 0.3
TPM1-211ENST00000558314 HAUS6Q7Z4H7 955 aa16.95■□□□□ 0.3
TPM1-211ENST00000558314 KCNG4Q8TDN1 519 aa16.95■□□□□ 0.3
TPM1-211ENST00000558314 NKD2Q969F2 451 aaPredicted RBP16.95■□□□□ 0.3
TPM1-211ENST00000558314 TBC1D32Q96NH3 1257 aa16.95■□□□□ 0.3
TPM1-211ENST00000558314 REEP2Q9BRK0 252 aa16.95■□□□□ 0.3
TPM1-211ENST00000558314 NTPCRQ9BSD7 190 aaKnown RBP16.95■□□□□ 0.3
TPM1-211ENST00000558314 FBXL5Q9UKA1 691 aa16.95■□□□□ 0.3
TPM1-211ENST00000558314 SIT1Q9Y3P8 196 aa16.95■□□□□ 0.3
TPM1-211ENST00000558314 TIMM13Q9Y5L4 95 aaPredicted RBP16.95■□□□□ 0.3
TPM1-211ENST00000558314 H0YCG3 227 aa16.94■□□□□ 0.3
TPM1-211ENST00000558314 HNRNPDLO14979 420 aaKnown RBP16.94■□□□□ 0.3
TPM1-211ENST00000558314 SYN3O14994 580 aa16.94■□□□□ 0.3
TPM1-211ENST00000558314 PAPLNO95428 1278 aa16.94■□□□□ 0.3
TPM1-211ENST00000558314 CPB1P15086 417 aa16.94■□□□□ 0.3
TPM1-211ENST00000558314 PLCG1P19174 1290 aa16.94■□□□□ 0.3
TPM1-211ENST00000558314 TNFSF9P41273 254 aa16.94■□□□□ 0.3
TPM1-211ENST00000558314 GUCY2FP51841 1108 aa16.94■□□□□ 0.3
TPM1-211ENST00000558314 GRIN1Q05586 938 aa16.94■□□□□ 0.3
TPM1-211ENST00000558314 PPP2R3AQ06190 1150 aa16.94■□□□□ 0.3
TPM1-211ENST00000558314 KARSQ15046 597 aaKnown RBP16.94■□□□□ 0.3
TPM1-211ENST00000558314 ZNF280DQ6N043 979 aa16.94■□□□□ 0.3
TPM1-211ENST00000558314 ZPBP2Q6X784 338 aa16.94■□□□□ 0.3
TPM1-211ENST00000558314 NPAS3Q8IXF0 933 aa16.94■□□□□ 0.3
TPM1-211ENST00000558314 ZNF461Q8TAF7 563 aa16.94■□□□□ 0.3
TPM1-211ENST00000558314 KCND2Q9NZV8 630 aa16.94■□□□□ 0.3
TPM1-211ENST00000558314 DAXXQ9UER7 740 aaPredicted RBP16.94■□□□□ 0.3
TPM1-211ENST00000558314 PRR23AA6NEV1 266 aa16.93■□□□□ 0.3
TPM1-211ENST00000558314 LRRN2O75325 713 aa16.93■□□□□ 0.3
TPM1-211ENST00000558314 TBCAO75347 108 aaKnown RBP16.93■□□□□ 0.3
TPM1-211ENST00000558314 SEC24AO95486 1093 aa16.93■□□□□ 0.3
TPM1-211ENST00000558314 CLTAP09496 248 aa16.93■□□□□ 0.3
TPM1-211ENST00000558314 CEBPBP17676 345 aa16.93■□□□□ 0.3
TPM1-211ENST00000558314 PTPN2P17706 415 aa16.93■□□□□ 0.3
TPM1-211ENST00000558314 NBL1P41271 181 aa16.93■□□□□ 0.3
TPM1-211ENST00000558314 NCKAP1LP55160 1127 aa16.93■□□□□ 0.3
TPM1-211ENST00000558314 MCL1Q07820 350 aa16.93■□□□□ 0.3
TPM1-211ENST00000558314 UBXN2BQ14CS0 331 aa16.93■□□□□ 0.3
TPM1-211ENST00000558314 SF3A1Q15459 793 aaKnown RBP16.93■□□□□ 0.3
TPM1-211ENST00000558314 SLC5A9Q2M3M2 681 aa16.93■□□□□ 0.3
TPM1-211ENST00000558314 ZBTB41Q5SVQ8 909 aa16.93■□□□□ 0.3
TPM1-211ENST00000558314 SLC8B1Q6J4K2 584 aa16.93■□□□□ 0.3
TPM1-211ENST00000558314 DSTYKQ6XUX3 929 aa16.93■□□□□ 0.3
TPM1-211ENST00000558314 APPL2Q8NEU8 664 aa16.93■□□□□ 0.3
TPM1-211ENST00000558314 DDX12PQ92771 950 aa16.93■□□□□ 0.3
TPM1-211ENST00000558314 AK8Q96MA6 479 aa16.93■□□□□ 0.3
TPM1-211ENST00000558314 HAPLN2Q9GZV7 340 aa16.93■□□□□ 0.3
TPM1-211ENST00000558314 SLC2A4RGQ9NR83 387 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms