RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 ZNF286BP0CG31 522 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 UNGP13051 313 aaPredicted RBP11.29□□□□□ -0.6
TPM1-210ENST00000558264 NSFP46459 744 aaKnown RBP11.29□□□□□ -0.6
TPM1-210ENST00000558264 ATP1A2P50993 1020 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 HADHBP55084 474 aaKnown RBP11.29□□□□□ -0.6
TPM1-210ENST00000558264 HNRNPH2P55795 449 aaKnown RBP11.29□□□□□ -0.6
TPM1-210ENST00000558264 MCCD1P59942 119 aaPredicted RBP11.29□□□□□ -0.6
TPM1-210ENST00000558264 PTENP60484 403 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 POU5F1Q01860 360 aaKnown RBP11.29□□□□□ -0.6
TPM1-210ENST00000558264 EEF1DP3Q658K8 133 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 EFCAB12Q6NXP0 572 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 FOXR1Q6PIV2 292 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 MCOLN2Q8IZK6 566 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 PRELID2Q8N945 189 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 FAM76AQ8TAV0 307 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 UBLCP1Q8WVY7 318 aaPredicted RBP11.29□□□□□ -0.6
TPM1-210ENST00000558264 BBXQ8WY36 941 aaPredicted RBP11.29□□□□□ -0.6
TPM1-210ENST00000558264 FAM118BQ9BPY3 351 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 MRPL4Q9BYD3 311 aaKnown RBP11.29□□□□□ -0.6
TPM1-210ENST00000558264 SNX24Q9Y343 169 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 UTP11Q9Y3A2 253 aaKnown RBP11.29□□□□□ -0.6
TPM1-210ENST00000558264 PCDHB2Q9Y5E7 798 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 GOLGA6L10A0A0M3HER8 536 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 FAM189A1O60320 539 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 LDHAP00338 332 aaKnown RBP11.29□□□□□ -0.6
TPM1-210ENST00000558264 WEE2P0C1S8 567 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 IQCF3P0C7M6 154 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 HSD17B3P37058 310 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 ORC1Q13415 861 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 UAP1Q16222 522 aaPredicted RBP11.29□□□□□ -0.6
TPM1-210ENST00000558264 MAPK6Q16659 721 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 SEL1L2Q5TEA6 688 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 CCDC62Q6P9F0 684 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 MMS22LQ6ZRQ5 1243 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 ARMCX2Q7L311 632 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 IQCKQ8N0W5 287 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 WHAMMQ8TF30 809 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 CD101Q93033 1021 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 MAGOHBQ96A72 148 aaKnown RBP11.29□□□□□ -0.6
TPM1-210ENST00000558264 ACO2Q99798 780 aaKnown RBP11.29□□□□□ -0.6
TPM1-210ENST00000558264 CCDC113Q9H0I3 377 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 SLITRK6Q9H5Y7 841 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 TMEM134Q9H6X4 195 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 LRRC4CQ9HCJ2 640 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 USTQ9Y2C2 406 aa11.29□□□□□ -0.6
TPM1-210ENST00000558264 LRRC37A2A6NM11 1700 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 MIF4GDA9UHW6 222 aaKnown RBP11.28□□□□□ -0.6
TPM1-210ENST00000558264 ZC3H11AO75152 810 aaKnown RBP eCLIP11.28□□□□□ -0.6
TPM1-210ENST00000558264 TOM1L1O75674 476 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 SSR1P43307 286 aaKnown RBP11.28□□□□□ -0.6
TPM1-210ENST00000558264 SNX1Q13596 522 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 ZNF568Q3ZCX4 644 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 CEP85LQ5SZL2 805 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 IER5Q5VY09 327 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 ENOSF1Q7L5Y1 443 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 ARMC9Q7Z3E5 817 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 ZBTB8OSQ8IWT0 167 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 SLC10A4Q96EP9 437 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 SH3GL2Q99962 352 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 BRD2P25440 801 aaKnown RBP11.28□□□□□ -0.6
TPM1-210ENST00000558264 CTNNA1P35221 906 aaKnown RBP11.28□□□□□ -0.6
TPM1-210ENST00000558264 RAP1GAPP47736 663 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 NNTQ13423 1086 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 ALS2CLQ60I27 953 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 USP50Q70EL3 339 aaPredicted RBP11.28□□□□□ -0.6
TPM1-210ENST00000558264 FASTKD5Q7L8L6 764 aaKnown RBP11.28□□□□□ -0.6
TPM1-210ENST00000558264 JAMLQ86YT9 394 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 BRSK2Q8IWQ3 736 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 C1orf54Q8WWF1 131 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 ATG4AQ8WYN0 398 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 FAM167AQ96KS9 214 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 MPHOSPH6Q99547 160 aaKnown RBP11.28□□□□□ -0.6
TPM1-210ENST00000558264 HERPUD2Q9BSE4 406 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 KLHL11Q9NVR0 708 aa11.28□□□□□ -0.6
TPM1-210ENST00000558264 TTC7AQ9ULT0 858 aaPredicted RBP11.28□□□□□ -0.6
TPM1-210ENST00000558264 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.27□□□□□ -0.6
TPM1-210ENST00000558264 VTNP04004 478 aa11.27□□□□□ -0.6
TPM1-210ENST00000558264 KRT19P08727 400 aa11.27□□□□□ -0.6
TPM1-210ENST00000558264 CXCL8P10145 99 aa11.27□□□□□ -0.6
TPM1-210ENST00000558264 RARAP10276 462 aa11.27□□□□□ -0.6
TPM1-210ENST00000558264 ADORA2AP29274 412 aa11.27□□□□□ -0.6
TPM1-210ENST00000558264 ADCYAP1R1P41586 468 aa11.27□□□□□ -0.6
TPM1-210ENST00000558264 PLTPP55058 493 aa11.27□□□□□ -0.6
TPM1-210ENST00000558264 PDE4CQ08493 712 aa11.27□□□□□ -0.6
TPM1-210ENST00000558264 SNAPC2Q13487 334 aa11.27□□□□□ -0.6
TPM1-210ENST00000558264 CUL1Q13616 776 aa11.27□□□□□ -0.6
TPM1-210ENST00000558264 ZSCAN26Q16670 478 aa11.27□□□□□ -0.6
TPM1-210ENST00000558264 UBAP2Q5T6F2 1119 aaKnown RBP11.27□□□□□ -0.6
TPM1-210ENST00000558264 EFCAB13Q8IY85 973 aa11.27□□□□□ -0.6
TPM1-210ENST00000558264 RPS6KC1Q96S38 1066 aa11.27□□□□□ -0.6
TPM1-210ENST00000558264 IMPG2Q9BZV3 1241 aa11.27□□□□□ -0.6
TPM1-210ENST00000558264 WNT8AQ9H1J5 351 aa11.27□□□□□ -0.6
TPM1-210ENST00000558264 UVRAGQ9P2Y5 699 aa11.27□□□□□ -0.6
TPM1-210ENST00000558264 NXF1Q9UBU9 619 aaKnown RBP11.27□□□□□ -0.6
TPM1-210ENST00000558264 KCNG1Q9UIX4 513 aa11.27□□□□□ -0.6
TPM1-210ENST00000558264 ATP8A1Q9Y2Q0 1164 aa11.27□□□□□ -0.6
TPM1-210ENST00000558264 ABLIM1O14639 778 aa11.27□□□□□ -0.61
TPM1-210ENST00000558264 OPA1O60313 960 aa11.27□□□□□ -0.61
TPM1-210ENST00000558264 LGR5O75473 907 aa11.27□□□□□ -0.61
TPM1-210ENST00000558264 MTA2O94776 668 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms